Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_28629_v3 Cicer arietinum L. HOM05D004433 ORTHO05D005251 5.2e-226 787.3 387 100.0
Sc23g0005440 Simmondsia chinensis HOM05D004433 ORTHO05D005251 2.1e-17 94.4 251 30.7
Zm00001eb153790 Zea mays HOM05D004433 ORTHO05D005251 3.6e-17 93.6 262 28.2
CsaV3_3G048450 Cucumis sativus L. HOM05D004433 ORTHO05D005251 1.8e-16 91.3 246 30.5
Ciclev10007803m.g Citrus clementina HOM05D004433 ORTHO05D005251 3.0e-16 90.5 246 30.5
QL12p040912 Quercus lobata HOM05D004433 ORTHO05D005251 5.2e-16 89.7 246 29.3
RcHm_v2.0_Chr6g0306701 Rosa chinensis HOM05D004433 ORTHO05D005251 5.2e-16 89.7 248 29.8
Mapoly0124s0034 Marchantia polymorpha HOM05D004433 ORTHO05D005251 8.9e-16 89.0 258 26.0
ClCG11G015050 Citrullus lanatus HOM05D004433 ORTHO05D005251 1.2e-15 88.6 246 30.1
FvH4_2g35230 Fragaria vesca HOM05D004433 ORTHO05D005251 4.4e-15 86.7 248 29.0
CSS0005257 Camellia sinensis var. sinensis HOM05D004433 ORTHO05D005251 5.7e-15 86.3 249 28.1
CSS0005508 Camellia sinensis var. sinensis HOM05D004433 ORTHO05D005251 5.7e-15 86.3 249 28.1
MELO3C003474.2 Cucumis melo HOM05D004433 ORTHO05D005251 5.7e-15 86.3 246 29.3
Aqoxy5G01364 Aquilegia oxysepala HOM05D004433 ORTHO05D005251 7.5e-15 85.9 249 28.9
CiPaw.08G027400 Carya illinoinensis HOM05D004433 ORTHO05D005251 7.5e-15 85.9 246 30.5
Lj7C697T10 Lonicera japonica HOM05D004433 ORTHO05D005251 7.5e-15 85.9 249 27.7
Sed0005675 Sechium edule HOM05D004433 ORTHO05D005251 7.5e-15 85.9 257 31.1
Actinidia18212 Actinidia chinensis HOM05D004433 ORTHO05D005251 2.2e-14 84.3 246 28.9
Ah.10g034740 Amaranthus hybridus HOM05D004433 ORTHO05D005251 2.2e-14 84.3 244 27.0
arahy.Tifrunner.gnm1.ann1.AK26AV Arachis hypogaea HOM05D004433 ORTHO05D005251 2.2e-14 84.3 249 27.7
Oeu019243.1 Olea europaea HOM05D004433 ORTHO05D005251 2.2e-14 84.3 248 29.4
Hund03376 Selenicereus undatus HOM05D004433 ORTHO05D005251 2.2e-14 84.3 242 28.1
Dinv27935 Davidia involucrata HOM05D004433 ORTHO05D005251 2.8e-14 84.0 248 29.0
TAR639G0002 Trochodendron aralioides HOM05D004433 ORTHO05D005251 2.8e-14 84.0 249 29.3
arahy.Tifrunner.gnm1.ann1.YGB7WG Arachis hypogaea HOM05D004433 ORTHO05D005251 3.7e-14 83.6 233 26.6
MSTRG.25921 Avicennia marina HOM05D004433 ORTHO05D005251 3.7e-14 83.6 248 27.8
COL.COLO4_21003 Corchorus olitorius HOM05D004433 ORTHO05D005251 3.7e-14 83.6 238 28.2
PSO210G3373 Papaver somniferum HOM05D004433 ORTHO05D005251 3.7e-14 83.6 246 26.8
Thecc.09G048300 Theobroma cacao HOM05D004433 ORTHO05D005251 3.7e-14 83.6 255 29.8
Cre06.g252150 Chlamydomonas reinhardtii HOM05D004433 ORTHO05D005251 4.9e-14 83.2 253 29.6
vmacro00182 Vaccinium macrocarpon HOM05D004433 ORTHO05D005251 4.9e-14 83.2 276 27.5
Actinidia14688 Actinidia chinensis HOM05D004433 ORTHO05D005251 6.3e-14 82.8 249 27.7
Prupe.1G444500 Prunus persica HOM05D004433 ORTHO05D005251 6.3e-14 82.8 245 28.2
FAN27G0398 Fragaria x ananassa HOM05D004433 ORTHO05D005251 1.1e-13 82.0 251 27.1
TWI34G1917 Tripterygium wilfordii HOM05D004433 ORTHO05D005251 1.1e-13 82.0 248 28.6
Thhalv10001936m.g Eutrema salsugineum HOM05D004433 ORTHO05D005251 1.4e-13 81.6 242 29.3
MD08G1110200 Malus domestica HOM05D004433 ORTHO05D005251 1.4e-13 81.6 251 26.7
AUR62040221 Chenopodium quinoa HOM05D004433 ORTHO05D005251 3.2e-13 80.5 244 27.5
PRCOL_00001006 Prasinoderma coloniale HOM05D004433 ORTHO05D005251 3.2e-13 80.5 265 30.2
PGR031G3150 Punica granatum HOM05D004433 ORTHO05D005251 3.2e-13 80.5 249 27.7
Eucgr.C00613 Eucalyptus grandis HOM05D004433 ORTHO05D005251 4.1e-13 80.1 257 28.4
Sp4g05710 Schrenkiella parvula HOM05D004433 ORTHO05D005251 4.1e-13 80.1 246 29.3
Duzib168G1809 Durio zibethinus HOM05D004433 ORTHO05D005251 5.4e-13 79.7 255 29.8
Lalb_Chr22g0360911 Lupinus albus HOM05D004433 ORTHO05D005251 5.4e-13 79.7 246 27.6
Prupe.1G444400 Prunus persica HOM05D004433 ORTHO05D005251 5.4e-13 79.7 251 26.7
BcaB06g29637 Brassica carinata HOM05D004433 ORTHO05D005251 7.0e-13 79.3 246 28.9
A04p20080 Brassica napus HOM05D004433 ORTHO05D005251 7.0e-13 79.3 246 28.9
C04p55760 Brassica napus HOM05D004433 ORTHO05D005251 7.0e-13 79.3 246 28.9
BolC4t27102H Brassica oleracea HOM05D004433 ORTHO05D005251 7.0e-13 79.3 246 28.9
BraA04t17590Z Brassica rapa HOM05D004433 ORTHO05D005251 7.0e-13 79.3 246 28.9
CARHR115360 Cardamine hirsuta HOM05D004433 ORTHO05D005251 7.0e-13 79.3 246 28.9
AUR62009222 Chenopodium quinoa HOM05D004433 ORTHO05D005251 7.0e-13 79.3 244 26.6
Gohir.D06G090400 Gossypium hirsutum HOM05D004433 ORTHO05D005251 9.2e-13 79.0 250 28.8
Atru.chr7.2050 Acer truncatum HOM05D004433 ORTHO05D005251 1.2e-12 78.6 251 27.1
Medtr1g007320 Medicago truncatula HOM05D004433 ORTHO05D005251 1.2e-12 78.6 254 28.7
Cfa013388 Carpinus fangiana HOM05D004433 ORTHO05D005251 1.6e-12 78.2 245 27.8
CDE09G0966 Ceratophyllum demersum HOM05D004433 ORTHO05D005251 1.6e-12 78.2 249 26.9
Migut.A00179 Erythranthe guttata HOM05D004433 ORTHO05D005251 1.6e-12 78.2 248 27.0
Lj1g0025930 Lotus japonicus HOM05D004433 ORTHO05D005251 1.6e-12 78.2 257 28.0
Pp3c15_25010 Physcomitrium patens HOM05D004433 ORTHO05D005251 1.6e-12 78.2 248 27.0
Phvul.001G078300 Phaseolus vulgaris HOM05D004433 ORTHO05D005251 2.0e-12 77.8 259 27.0
Potri.018G057500 Populus trichocarpa HOM05D004433 ORTHO05D005251 2.0e-12 77.8 251 27.5
BcaB06g29638 Brassica carinata HOM05D004433 ORTHO05D005251 2.7e-12 77.4 246 28.5
Ca_03360_v3 Cicer arietinum L. HOM05D004433 ORTHO05D005251 2.7e-12 77.4 249 26.9
HanXRQChr02g0047921 Helianthus annuus HOM05D004433 ORTHO05D005251 3.5e-12 77.0 251 28.3
GSVIVG01035316001 Vitis vinifera HOM05D004433 ORTHO05D005251 3.5e-12 77.0 246 27.6
Duzib150G0295 Durio zibethinus HOM05D004433 ORTHO05D005251 4.5e-12 76.6 255 28.6
Carub.0004s0569 Capsella rubella HOM05D004433 ORTHO05D005251 5.9e-12 76.3 239 28.9
CBR_g31496 Chara braunii HOM05D004433 ORTHO05D005251 5.9e-12 76.3 259 28.2
Gohir.A06G091200 Gossypium hirsutum HOM05D004433 ORTHO05D005251 7.8e-12 75.9 255 28.6
VMungo1383G1648 Vigna mungo HOM05D004433 ORTHO05D005251 7.8e-12 75.9 259 27.0
Solyc08g066180.3 Solanum lycopersicum HOM05D004433 ORTHO05D005251 1.0e-11 75.5 248 27.0
MD08G1110300 Malus domestica HOM05D004433 ORTHO05D005251 1.3e-11 75.1 257 26.8
Peaxi162Scf00699g00520 Petunia axillaris HOM05D004433 ORTHO05D005251 1.3e-11 75.1 249 26.5
Sopen08g019860 Solanum pennellii HOM05D004433 ORTHO05D005251 1.3e-11 75.1 249 26.5
THA.LOC104818595 Tarenaya hassleriana HOM05D004433 ORTHO05D005251 1.3e-11 75.1 251 25.9
Lsat_1_v5_gn_6_7781 Lactuca sativa HOM05D004433 ORTHO05D005251 1.7e-11 74.7 250 28.8
Nn8g39044 Nelumbo nucifera HOM05D004433 ORTHO05D005251 1.7e-11 74.7 249 27.7
Nitab4.5_0000318g0140 Nicotiana tabacum HOM05D004433 ORTHO05D005251 1.7e-11 74.7 249 26.1
ECA233G5497 Erigeron canadensis HOM05D004433 ORTHO05D005251 2.3e-11 74.3 249 27.7
AT2G25870 Arabidopsis thaliana HOM05D004433 ORTHO05D005251 2.9e-11 73.9 242 28.1
FAN15G3540 Fragaria x ananassa HOM05D004433 ORTHO05D005251 2.9e-11 73.9 347 23.1
FvH4_2g35220 Fragaria vesca HOM05D004433 ORTHO05D005251 3.9e-11 73.6 251 26.3
MCO10G003 Micromonas commoda HOM05D004433 ORTHO05D005251 3.9e-11 73.6 238 29.0
Nitab4.5_0008242g0010 Nicotiana tabacum HOM05D004433 ORTHO05D005251 3.9e-11 73.6 246 26.0
Psat6g036080 Pisum sativum HOM05D004433 ORTHO05D005251 3.9e-11 73.6 245 26.5
SalBow4G2164 Salvia bowleyana HOM05D004433 ORTHO05D005251 3.9e-11 73.6 240 26.7
Gorai.010G104100 Gossypium raimondii HOM05D004433 ORTHO05D005251 5.0e-11 73.2 247 28.3
RcHm_v2.0_Chr6g0306711 Rosa chinensis HOM05D004433 ORTHO05D005251 5.0e-11 73.2 248 26.2
unitig_32.g11476 Utricularia gibba HOM05D004433 ORTHO05D005251 6.6e-11 72.8 252 25.8
Aa31LG5G9810 Aethionema arabicum HOM05D004433 ORTHO05D005251 8.6e-11 72.4 249 26.1
ATR0705G146 Amborella trichopoda HOM05D004433 ORTHO05D005251 1.1e-10 72.0 246 30.5
AL4G17700 Arabidopsis lyrata HOM05D004433 ORTHO05D005251 1.1e-10 72.0 249 27.3
CAN.G1444.6 Capsicum annuum HOM05D004433 ORTHO05D005251 1.1e-10 72.0 249 26.1
Glyma.14G144100 Glycine max HOM05D004433 ORTHO05D005251 2.5e-10 70.9 251 25.9
CANSAT21G1878 Cannabis sativa HOM05D004433 ORTHO05D005251 3.3e-10 70.5 241 25.7
CANSAT21G2561 Cannabis sativa HOM05D004433 ORTHO05D005251 3.3e-10 70.5 246 26.4
DCAR_003083 Daucus carota HOM05D004433 ORTHO05D005251 5.6e-10 69.7 242 26.0
FAN15G1676 Fragaria x ananassa HOM05D004433 ORTHO05D005251 5.6e-10 69.7 265 26.0
SMO352G0038 Selaginella moellendorffii HOM05D004433 ORTHO05D005251 9.5e-10 68.9 232 25.0
TPR.G24519 Trifolium pratense HOM05D004433 ORTHO05D005251 9.5e-10 68.9 250 26.8
EL10Ac2g03971 Beta vulgaris HOM05D004433 ORTHO05D005251 1.6e-09 68.2 245 25.7
Os09g0388400 Oryza sativa ssp. japonica HOM05D004433 ORTHO05D005251 1.6e-09 68.2 255 25.1
FAN20G2992 Fragaria x ananassa HOM05D004433 ORTHO05D005251 1.4e-08 65.1 248 24.6
Hund19490 Selenicereus undatus HOM05D004433 ORTHO05D005251 4.0e-08 63.5 97 36.1
MBI04_g07004_MAGBIO Magnolia biondii HOM05D004433 ORTHO05D005251 5.2e-08 63.2 243 26.7
Pp3s32_540 Physcomitrium patens HOM05D004878 ORTHO05D021266 6.8e-08 62.8 239 25.1
SEGI_35823 Sequoiadendron giganteum HOM05D004433 ORTHO05D005251 4.4e-07 60.1 58 50.0
Cc08_g09960 Coffea canephora HOM05D004433 ORTHO05D005251 1.3e-06 58.5 59 47.5
Sabra18G0052000 Salix brachista HOM05D004433 ORTHO05D005251 2.9e-06 57.4 58 44.8
Cpa.g.sc7.220 Carica papaya HOM05D004433 ORTHO05D005251 6.4e-06 56.2 50 54.0
SGA_v2.0_scaffold103G30047 Striga asiatica HOM05D004433 ORTHO05D005251 6.4e-06 56.2 59 44.1


User provided reference genes

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