Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_16414_v3 Cicer arietinum L. HOM05D005045 ORTHO05D006386 2.9e-131 471.9 235 100.0
Ca_16406_v3 Cicer arietinum L. HOM05D005045 ORTHO05D006386 1.6e-124 449.5 224 99.6
Medtr3g084300 Medicago truncatula HOM05D005045 ORTHO05D006386 1.6e-124 449.5 224 99.6
Psat5g100040 Pisum sativum HOM05D005045 ORTHO05D006386 1.6e-124 449.5 224 99.6
Ciclev10004166m.g Citrus clementina HOM05D005045 ORTHO05D006386 1.1e-122 443.4 222 98.2
Manes.03G144200 Manihot esculenta HOM05D005045 ORTHO05D006386 1.1e-122 443.4 222 98.2
Actinidia28996 Actinidia chinensis HOM05D005045 ORTHO05D006386 2.5e-122 442.2 222 98.2
CSS0020032 Camellia sinensis var. sinensis HOM05D005045 ORTHO05D006386 2.5e-122 442.2 222 97.7
Glyma.18G002400 Glycine max HOM05D005045 ORTHO05D006386 3.3e-122 441.8 222 97.7
MELO3C006292.2 Cucumis melo HOM05D005045 ORTHO05D006386 4.3e-122 441.4 222 97.7
Cpa.g.sc157.48 Carica papaya HOM05D005045 ORTHO05D006386 5.6e-122 441.0 222 97.7
Phvul.001G266800 Phaseolus vulgaris HOM05D005045 ORTHO05D006386 5.6e-122 441.0 222 97.7
TWI53G1845 Tripterygium wilfordii HOM05D005045 ORTHO05D006386 7.3e-122 440.7 222 97.7
CiPaw.01G116800 Carya illinoinensis HOM05D005045 ORTHO05D006386 9.5e-122 440.3 222 97.7
Dinv38168 Davidia involucrata HOM05D005045 ORTHO05D006386 9.5e-122 440.3 222 97.3
Gohir.A02G019100 Gossypium hirsutum HOM05D005045 ORTHO05D006386 9.5e-122 440.3 222 97.7
Sed0026716 Sechium edule HOM05D005045 ORTHO05D006386 9.5e-122 440.3 222 97.7
TAR362G1154 Trochodendron aralioides HOM05D005045 ORTHO05D006386 9.5e-122 440.3 222 97.7
Atru.chr4.1578 Acer truncatum HOM05D005045 ORTHO05D006386 1.2e-121 439.9 222 97.3
CsaV3_3G010730 Cucumis sativus L. HOM05D005045 ORTHO05D006386 1.2e-121 439.9 222 97.3
arahy.Tifrunner.gnm1.ann1.2Y4S4L Arachis hypogaea HOM05D005045 ORTHO05D006386 1.6e-121 439.5 222 97.3
arahy.Tifrunner.gnm1.ann1.RK3EBX Arachis hypogaea HOM05D005045 ORTHO05D006386 1.6e-121 439.5 222 97.3
Nitab4.5_0002260g0080 Nicotiana tabacum HOM05D005045 ORTHO05D006386 1.6e-121 439.5 222 96.8
Gohir.D02G022400 Gossypium hirsutum HOM05D005045 ORTHO05D006386 2.1e-121 439.1 222 97.3
Gorai.005G027800 Gossypium raimondii HOM05D005045 ORTHO05D006386 2.1e-121 439.1 222 97.3
Cfa014961 Carpinus fangiana HOM05D005045 ORTHO05D006386 2.8e-121 438.7 222 97.3
CAN.G765.38 Capsicum annuum HOM05D005045 ORTHO05D006386 3.6e-121 438.3 222 96.4
DCAR_005488 Daucus carota HOM05D005045 ORTHO05D006386 4.7e-121 438.0 222 95.9
Aqoxy2G03932 Aquilegia oxysepala HOM05D005045 ORTHO05D006386 6.2e-121 437.6 222 96.8
Lj6g0005100 Lotus japonicus HOM05D005045 ORTHO05D006386 6.2e-121 437.6 222 97.3
Thecc.04G195000 Theobroma cacao HOM05D005045 ORTHO05D006386 6.2e-121 437.6 222 97.3
BolC3t14484H Brassica oleracea HOM05D005045 ORTHO05D006386 8.1e-121 437.2 228 94.7
BraA03t11060Z Brassica rapa HOM05D005045 ORTHO05D006386 8.1e-121 437.2 228 94.7
Peaxi162Scf00423g00410 Petunia axillaris HOM05D005045 ORTHO05D006386 8.1e-121 437.2 222 96.4
MBI07_g27366_MAGBIO Magnolia biondii HOM05D005045 ORTHO05D006386 1.1e-120 436.8 222 96.8
TPR.G25379 Trifolium pratense HOM05D005045 ORTHO05D006386 1.4e-120 436.4 244 91.0
A03p17990 Brassica napus HOM05D005045 ORTHO05D006386 1.8e-120 436.0 226 95.1
Thhalv10016151m.g Eutrema salsugineum HOM05D005045 ORTHO05D006386 1.8e-120 436.0 222 96.8
PSO017G0058 Papaver somniferum HOM05D005045 ORTHO05D006386 1.8e-120 436.0 222 96.8
Sp4g14350 Schrenkiella parvula HOM05D005045 ORTHO05D006386 1.8e-120 436.0 222 96.8
C03p21030 Brassica napus HOM05D005045 ORTHO05D006386 3.1e-120 435.3 228 94.3
Potri.001G320300 Populus trichocarpa HOM05D005045 ORTHO05D006386 4.0e-120 434.9 222 96.4
Aa31LG5G5040 Aethionema arabicum HOM05D005045 ORTHO05D006386 5.2e-120 434.5 222 96.4
BcaB01g04004 Brassica carinata HOM05D005045 ORTHO05D006386 5.2e-120 434.5 222 96.4
AL4G27320 Arabidopsis lyrata HOM05D005045 ORTHO05D006386 6.8e-120 434.1 222 95.9
AT2G31970 Arabidopsis thaliana HOM05D005045 ORTHO05D006386 6.8e-120 434.1 222 95.9
Carub.0004s1329 Capsella rubella HOM05D005045 ORTHO05D006386 6.8e-120 434.1 222 95.9
Prupe.1G165000 Prunus persica HOM05D005045 ORTHO05D006386 8.9e-120 433.7 222 95.9
RcHm_v2.0_Chr4g0413591 Rosa chinensis HOM05D005045 ORTHO05D006386 1.5e-119 433.0 222 96.8
VMungo1383G3533 Vigna mungo HOM05D005045 ORTHO05D006386 1.5e-119 433.0 222 95.5
FvH4_4g13300 Fragaria vesca HOM05D005045 ORTHO05D006386 3.4e-119 431.8 222 95.5
FAN07G1455 Fragaria x ananassa HOM05D005045 ORTHO05D006386 3.4e-119 431.8 222 95.5
FAN22G0494 Fragaria x ananassa HOM05D005045 ORTHO05D006386 3.4e-119 431.8 222 95.5
HPP92_024209 Vanilla planifolia HOM05D005045 ORTHO05D006386 3.4e-119 431.8 225 93.3
Nn3g20083 Nelumbo nucifera HOM05D005045 ORTHO05D006386 4.4e-119 431.4 222 95.9
THA.LOC104826172 Tarenaya hassleriana HOM05D005045 ORTHO05D006386 5.8e-119 431.0 222 95.0
FAN12G2321 Fragaria x ananassa HOM05D005045 ORTHO05D006386 7.5e-119 430.6 222 95.0
SalBow8G0828 Salvia bowleyana HOM05D005045 ORTHO05D006386 9.8e-119 430.3 232 91.4
Sopen05g032270 Solanum pennellii HOM05D005045 ORTHO05D006386 9.8e-119 430.3 222 93.7
MD05G1230300 Malus domestica HOM05D005045 ORTHO05D006386 2.2e-118 429.1 222 94.6
SGA_v2.0_scaffold27G11679 Striga asiatica HOM05D005045 ORTHO05D006386 2.2e-118 429.1 222 94.6
Sabra16G0202900 Salix brachista HOM05D005045 ORTHO05D006386 3.7e-118 428.3 228 93.9
Zm00001eb181120 Zea mays HOM05D005045 ORTHO05D006386 3.7e-118 428.3 222 93.2
Lalb_Chr11g0075871 Lupinus albus HOM05D005045 ORTHO05D006386 4.9e-118 427.9 221 95.5
Cc03_g08470 Coffea canephora HOM05D005045 ORTHO05D006386 8.3e-118 427.2 222 95.0
Solyc05g053800.3 Solanum lycopersicum HOM05D005045 ORTHO05D006386 8.3e-118 427.2 222 93.2
ClCG05G003110 Citrullus lanatus HOM05D005045 ORTHO05D006386 1.9e-117 426.0 251 86.5
ATR0561G148 Amborella trichopoda HOM05D005045 ORTHO05D006386 3.2e-117 425.2 222 93.7
EL10Ac3g07454 Beta vulgaris HOM05D005045 ORTHO05D006386 5.4e-117 424.5 222 94.6
SHI26063 Sapria himalayana HOM05D005045 ORTHO05D006386 3.5e-116 421.8 228 91.7
Migut.G00767 Erythranthe guttata HOM05D005045 ORTHO05D006386 4.6e-116 421.4 222 93.7
MSTRG.9796 Avicennia marina HOM05D005045 ORTHO05D006386 1.3e-115 419.9 222 92.8
ECA233G4939 Erigeron canadensis HOM05D005045 ORTHO05D006386 1.6e-113 412.9 222 92.8
SEGI_03959 Sequoiadendron giganteum HOM05D005045 ORTHO05D006386 1.6e-113 412.9 222 91.4
unitig_0.g1960 Utricularia gibba HOM05D005045 ORTHO05D006386 3.6e-113 411.8 225 89.8
HanXRQChr02g0058481 Helianthus annuus HOM05D005045 ORTHO05D006386 1.1e-112 410.2 222 91.9
Lsat_1_v5_gn_6_59140 Lactuca sativa HOM05D005045 ORTHO05D006386 2.3e-112 409.1 221 92.3
AagrBONN_evm.TU.Sc2ySwM_368.995 Anthoceros agrestis HOM05D002013 ORTHO05D002293 9.9e-111 403.7 222 87.8
Haze_11653 Corylus avellana HOM05D005045 ORTHO05D006386 1.6e-108 396.4 332 65.7
SMO356G0717 Selaginella moellendorffii HOM05D005045 ORTHO05D006386 2.1e-108 396.0 222 86.9
vmacro15566 Vaccinium macrocarpon HOM05D005045 ORTHO05D006386 5.1e-107 391.3 274 75.9
Mapoly0027s0186 Marchantia polymorpha HOM05D005045 ORTHO05D006386 2.5e-106 389.0 222 85.6
Pp3c10_3760 Physcomitrium patens HOM05D005045 ORTHO05D006386 4.3e-106 388.3 232 83.6
CDE02G0777 Ceratophyllum demersum HOM05D005045 ORTHO05D006386 4.3e-98 361.7 223 83.9
PGR142G0016 Punica granatum HOM05D005045 ORTHO05D006386 1.3e-97 360.1 222 84.7
Duzib151G0179 Durio zibethinus HOM05D005045 ORTHO05D006386 2.8e-97 359.0 222 83.3
Lj6C381G5 Lonicera japonica HOM05D005045 ORTHO05D006386 6.2e-97 357.8 222 82.9
AUR62020862 Chenopodium quinoa HOM05D005045 ORTHO05D006386 2.7e-92 342.4 189 89.4
arahy.Tifrunner.gnm1.ann1.KK4CMR Arachis hypogaea HOM05D005045 ORTHO05D006386 6.0e-92 341.3 222 79.3
Ah.04g149400 Amaranthus hybridus HOM05D005045 ORTHO05D006386 1.3e-91 340.1 222 79.7
Rhsim02G0061900 Rhododendron simsii HOM05D005045 ORTHO05D006386 2.2e-78 296.2 152 97.4
Cre03.g192550 Chlamydomonas reinhardtii HOM05D005045 ORTHO05D006386 5.7e-74 281.6 221 58.8
MCO01G132 Micromonas commoda HOM05D005045 ORTHO05D006386 7.4e-74 281.2 222 62.6
PRCOL_00000463 Prasinoderma coloniale HOM05D005045 ORTHO05D006386 1.6e-73 280.0 221 58.8
SMO217G0009 Selaginella moellendorffii HOM05D005045 ORTHO05D006386 2.0e-71 273.1 152 88.8
CBR_g44539 Chara braunii HOM05D005045 ORTHO05D006386 2.7e-68 262.7 221 62.0
COL.COLO4_20231 Corchorus olitorius HOM05D005045 ORTHO05D006386 4.8e-65 251.9 126 97.6
Nitab4.5_0003358g0100 Nicotiana tabacum HOM05D005045 ORTHO05D006386 2.4e-64 249.6 126 94.4
Aqoxy430s001 Aquilegia oxysepala HOM05D005045 ORTHO05D006386 4.3e-58 228.8 115 97.4
Eucgr.H00025 Eucalyptus grandis HOM05D005045 ORTHO05D006386 9.7e-58 227.6 115 96.5
Sc19g0007360 Simmondsia chinensis HOM05D005045 ORTHO05D006386 2.8e-57 226.1 115 96.5
Cfa022909 Carpinus fangiana HOM05D005045 ORTHO05D006386 2.6e-55 219.5 204 54.4
Prupe.1G180400 Prunus persica HOM05D005045 ORTHO05D006386 5.0e-46 188.7 170 59.4
BcaNung07125 Brassica carinata HOM05D005045 ORTHO05D006386 1.3e-41 174.1 96 90.6
Nitab4.5_0003358g0080 Nicotiana tabacum HOM05D005045 ORTHO05D006386 3.7e-41 172.6 86 100.0
Lju912C0T2 Lonicera japonica HOM05D005045 ORTHO05D006386 9.1e-40 167.9 86 95.3
Rhsim02G0061800 Rhododendron simsii HOM05D005045 ORTHO05D006386 2.0e-34 150.2 72 95.8
Actinidia11455 Actinidia chinensis HOM05D005045 ORTHO05D006386 4.8e-33 145.6 121 63.6
MBI07_g45033_MAGBIO Magnolia biondii HOM05D005045 ORTHO05D006386 1.2e-23 114.4 100 63.0


User provided reference genes

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