Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_16175_v3 Cicer arietinum L. HOM05D001734 ORTHO05D003483 1.2e-261 906.0 448 100.0
Medtr3g077860 Medicago truncatula HOM05D001734 ORTHO05D003483 5.8e-229 797.3 448 88.2
Glyma.04G182900 Glycine max HOM05D001734 ORTHO05D003483 1.6e-226 789.3 448 87.3
Phvul.009G178400 Phaseolus vulgaris HOM05D001734 ORTHO05D003483 1.4e-222 776.2 448 84.4
Lj1g0011912 Lotus japonicus HOM05D001734 ORTHO05D003483 2.1e-218 762.3 448 83.5
arahy.Tifrunner.gnm1.ann1.2D0TBT Arachis hypogaea HOM05D001734 ORTHO05D003483 1.9e-216 755.7 445 82.9
VMungo1309G1926 Vigna mungo HOM05D000002 ORTHO05D000001 1.7e-196 689.5 506 70.2
QL10p011601 Quercus lobata HOM05D001734 ORTHO05D003483 2.5e-187 659.1 445 71.2
CiPaw.11G026100 Carya illinoinensis HOM05D001734 ORTHO05D003483 7.2e-187 657.5 445 71.0
Cfa019134 Carpinus fangiana HOM05D001734 ORTHO05D003483 1.6e-186 656.4 445 70.6
GSVIVG01007755001 Vitis vinifera HOM05D001734 ORTHO05D003483 3.3e-179 632.1 448 67.4
Thecc.03G012800 Theobroma cacao HOM05D001734 ORTHO05D003483 9.5e-179 630.6 445 68.5
Potri.015G076650 Populus trichocarpa HOM05D001734 ORTHO05D003483 1.6e-178 629.8 446 69.7
Dinv20652 Davidia involucrata HOM05D001734 ORTHO05D003483 2.3e-177 625.9 448 69.0
Manes.06G105000 Manihot esculenta HOM05D001734 ORTHO05D003483 3.0e-177 625.5 445 67.6
Duzib084G0583 Durio zibethinus HOM05D001734 ORTHO05D003483 3.4e-176 622.1 445 68.5
TAR629G2960 Trochodendron aralioides HOM05D001734 ORTHO05D003483 7.5e-176 620.9 446 68.2
CANSAT80G1574 Cannabis sativa HOM05D001734 ORTHO05D003483 1.1e-174 617.1 447 67.3
Sed0023277 Sechium edule HOM05D001734 ORTHO05D003483 1.4e-174 616.7 445 65.2
ClCG06G017040 Citrullus lanatus HOM05D001734 ORTHO05D003483 4.1e-174 615.1 445 65.4
CsaV3_1G001470 Cucumis sativus L. HOM05D001734 ORTHO05D003483 9.2e-174 614.0 445 65.2
Lalb_Chr08g0236521 Lupinus albus HOM05D001734 ORTHO05D003483 1.2e-173 613.6 397 79.1
TPR.G6095 Trifolium pratense HOM05D001734 ORTHO05D003483 1.2e-173 613.6 358 85.8
TWI14G0283 Tripterygium wilfordii HOM05D001734 ORTHO05D003483 3.5e-173 612.1 445 66.3
MELO3C017087.2 Cucumis melo HOM05D001734 ORTHO05D003483 1.7e-172 609.8 445 64.9
Gohir.A09G171650 Gossypium hirsutum HOM05D001734 ORTHO05D003483 2.9e-172 609.0 445 66.5
Prupe.5G173600 Prunus persica HOM05D001734 ORTHO05D003483 3.8e-172 608.6 445 67.0
Gorai.006G189100 Gossypium raimondii HOM05D001734 ORTHO05D003483 1.9e-171 606.3 445 66.5
Gohir.A09G171700 Gossypium hirsutum HOM05D001734 ORTHO05D003483 8.0e-170 600.9 445 66.3
Atru.chr9.2479 Acer truncatum HOM05D001734 ORTHO05D003483 1.7e-167 593.2 450 64.9
MD06G1173700 Malus domestica HOM05D001734 ORTHO05D003483 2.2e-167 592.8 448 65.8
PSO063G7150 Papaver somniferum HOM05D001734 ORTHO05D003483 1.1e-166 590.5 450 63.6
Sopen03g032020 Solanum pennellii HOM05D001734 ORTHO05D003483 1.2e-165 587.0 446 64.8
Nn4g22757 Nelumbo nucifera HOM05D001734 ORTHO05D003483 7.8e-165 584.3 444 64.4
vmacro19389 Vaccinium macrocarpon HOM05D001734 ORTHO05D003483 1.0e-164 583.9 448 63.2
Sc04g0001800 Simmondsia chinensis HOM05D001734 ORTHO05D003483 6.6e-164 581.3 448 63.4
RcHm_v2.0_Chr6g0271131 Rosa chinensis HOM05D001734 ORTHO05D003483 1.5e-163 580.1 447 63.5
PSO063G0326 Papaver somniferum HOM05D001734 ORTHO05D003483 7.3e-163 577.8 450 62.4
Eucgr.K02842 Eucalyptus grandis HOM05D001734 ORTHO05D003483 1.2e-162 577.0 447 63.3
FAN15G3378 Fragaria x ananassa HOM05D001734 ORTHO05D003483 1.2e-162 577.0 447 62.9
Rhsim08G0172200 Rhododendron simsii HOM05D001734 ORTHO05D003483 2.1e-162 576.2 461 62.7
Cc04_g14140 Coffea canephora HOM05D001734 ORTHO05D003483 1.5e-160 570.1 447 63.3
FvH4_2g11670 Fragaria vesca HOM05D001734 ORTHO05D003483 4.4e-160 568.5 447 62.0
FAN24G1896 Fragaria x ananassa HOM05D001734 ORTHO05D003483 4.4e-160 568.5 447 62.0
PGR044G0033 Punica granatum HOM05D001734 ORTHO05D003483 3.2e-158 562.4 447 60.9
Carub.0005s1431 Capsella rubella HOM05D001734 ORTHO05D003483 5.6e-155 551.6 445 60.9
MSTRG.11455 Avicennia marina HOM05D001734 ORTHO05D003483 1.2e-154 550.4 447 59.5
Peaxi162Scf00009g00112 Petunia axillaris HOM05D001734 ORTHO05D003483 3.6e-154 548.9 445 61.3
Lsat_1_v5_gn_1_27061 Lactuca sativa HOM05D001734 ORTHO05D003483 6.2e-154 548.1 445 59.3
CAN.G1305.20 Capsicum annuum HOM05D001734 ORTHO05D003483 1.1e-153 547.4 477 58.7
HanXRQChr02g0036361 Helianthus annuus HOM05D001734 ORTHO05D003483 2.0e-152 543.1 446 58.5
AT3G48190 Arabidopsis thaliana HOM05D001734 ORTHO05D003483 4.4e-152 542.0 445 60.2
SalBow5G1563 Salvia bowleyana HOM05D001734 ORTHO05D003483 2.2e-151 539.7 446 58.3
Migut.I00009 Erythranthe guttata HOM05D001734 ORTHO05D003483 2.9e-151 539.3 447 59.3
FAN05G0227 Fragaria x ananassa HOM05D001734 ORTHO05D003483 2.9e-151 539.3 428 61.0
ECA247G1446 Erigeron canadensis HOM05D001734 ORTHO05D003483 6.4e-151 538.1 444 58.3
CARHR156920 Cardamine hirsuta HOM05D001734 ORTHO05D003483 7.1e-150 534.6 457 58.4
Aa31LG4G16790 Aethionema arabicum HOM05D001734 ORTHO05D003483 3.0e-148 529.3 445 59.8
SGA_v2.0_scaffold90G27914 Striga asiatica HOM05D001734 ORTHO05D003483 3.0e-148 529.3 452 56.6
A06p27460 Brassica napus HOM05D001734 ORTHO05D003483 1.4e-145 520.4 445 58.4
BraA06t25686Z Brassica rapa HOM05D001734 ORTHO05D003483 1.4e-145 520.4 445 58.4
Thhalv10010050m.g Eutrema salsugineum HOM05D001734 ORTHO05D003483 1.8e-145 520.0 424 60.6
DCAR_026136 Daucus carota HOM05D001734 ORTHO05D003483 8.9e-145 517.7 458 56.8
THA.LOC104818218 Tarenaya hassleriana HOM05D001734 ORTHO05D003483 2.9e-143 512.7 428 59.6
Ciclev10018427m.g Citrus clementina HOM05D001734 ORTHO05D003483 8.4e-143 511.1 376 68.4
EL10Ac5g10743 Beta vulgaris HOM05D001734 ORTHO05D003483 6.6e-140 501.5 455 54.3
COL.COLO4_30039 Corchorus olitorius HOM05D001734 ORTHO05D003483 1.2e-138 497.3 445 58.0
C03p66700 Brassica napus HOM05D001734 ORTHO05D003483 6.2e-138 495.0 424 58.0
BolC3t18938H Brassica oleracea HOM05D001734 ORTHO05D003483 2.4e-137 493.0 424 58.0
PSO732G0258 Papaver somniferum HOM05D001734 ORTHO05D003483 2.0e-136 490.0 393 62.1
Lj9A448T39 Lonicera japonica HOM05D001734 ORTHO05D003483 1.3e-135 487.3 434 60.1
Cpa.g.sc1166.1 Carica papaya HOM05D001734 ORTHO05D003483 2.2e-135 486.5 375 65.1
Oeu016387.4 Olea europaea HOM05D001734 ORTHO05D003483 8.4e-135 484.6 395 60.3
Aqoxy3G02937 Aquilegia oxysepala HOM05D001734 ORTHO05D003483 7.8e-133 478.0 453 52.3
CSS0012833 Camellia sinensis var. sinensis HOM05D001734 ORTHO05D003483 2.4e-126 456.4 326 66.9
Haze_07473 Corylus avellana HOM05D001734 ORTHO05D003483 2.1e-125 453.4 302 70.2
HPP92_004845 Vanilla planifolia HOM05D002152 ORTHO05D003483 2.1e-125 453.4 448 50.4
Hund02745 Selenicereus undatus HOM05D001734 ORTHO05D003483 2.7e-125 453.0 362 62.2
AL5G27530 Arabidopsis lyrata HOM05D001734 ORTHO05D003483 7.6e-120 434.9 370 58.6
ATR0730G017 Amborella trichopoda HOM05D001734 ORTHO05D003483 8.7e-116 421.4 444 48.6
Os01g0106700 Oryza sativa ssp. japonica HOM05D001734 ORTHO05D003483 2.2e-111 406.8 444 45.0
Actinidia19322 Actinidia chinensis HOM05D001734 ORTHO05D003483 4.2e-110 402.5 296 64.9
Zm00001eb126710 Zea mays HOM05D001734 ORTHO05D003483 2.6e-104 383.3 449 42.3
Migut.C00312 Erythranthe guttata HOM05D001734 ORTHO05D003483 9.4e-94 348.2 359 51.5
CDE07G0247 Ceratophyllum demersum HOM05D001734 ORTHO05D003483 9.7e-91 338.2 288 54.5
Nitab4.5_0000984g0080 Nicotiana tabacum HOM05D001734 ORTHO05D003483 1.1e-86 324.7 332 52.7
Mapoly0081s0051 Marchantia polymorpha HOM05D001734 ORTHO05D003483 2.2e-82 310.5 450 39.1
Pp3c2_23700 Physcomitrium patens HOM05D001734 ORTHO05D003483 1.9e-78 297.4 452 36.7
Rhsim06G0125200 Rhododendron simsii HOM05D001734 ORTHO05D003483 1.4e-73 281.2 265 57.4
SEGI_17988 Sequoiadendron giganteum HOM05D001734 ORTHO05D003483 2.9e-71 273.5 307 43.6
AagrBONN_evm.TU.Sc2ySwM_117.1596 Anthoceros agrestis HOM05D001734 ORTHO05D003483 1.2e-69 268.1 447 36.5
COL.COLO4_30229 Corchorus olitorius HOM05D001734 ORTHO05D003483 1.6e-64 251.1 385 41.0
BcaNung06699 Brassica carinata HOM05D001734 ORTHO05D003483 2.9e-63 246.9 210 60.0
SHI17017 Sapria himalayana HOM05D001734 ORTHO05D003483 5.0e-63 246.1 233 56.7
Rhsim02G0151200 Rhododendron simsii HOM05D001734 ORTHO05D003483 1.0e-52 211.8 245 48.2
arahy.Tifrunner.gnm1.ann1.BK2P93 Arachis hypogaea HOM05D001734 ORTHO05D003483 7.5e-51 205.7 190 60.0
Rhsim08G0157900 Rhododendron simsii HOM05D001734 ORTHO05D003483 2.8e-45 187.2 449 32.7
arahy.Tifrunner.gnm1.ann1.1I6Y5K Arachis hypogaea HOM05D001734 ORTHO05D003483 4.4e-43 179.9 113 73.5
arahy.Tifrunner.gnm1.ann1.EMU6Q2 Arachis hypogaea HOM05D001734 ORTHO05D003483 8.9e-36 155.6 116 68.1
TPR.G5903 Trifolium pratense HOM05D001734 ORTHO05D003483 2.6e-35 154.1 98 81.6
Sp5g13840 Schrenkiella parvula HOM05D001734 ORTHO05D003483 2.2e-34 151.0 133 59.4
CBR_g286 Chara braunii HOM05D000004 ORTHO05D000002 3.9e-31 140.2 237 37.6
Rhsim06G0125100 Rhododendron simsii HOM05D001734 ORTHO05D003483 5.6e-30 136.3 117 60.7
SHI17018 Sapria himalayana HOM05D000105 ORTHO05D000023 7.6e-27 125.9 240 37.9
TPR.G5917 Trifolium pratense HOM05D001734 ORTHO05D003483 3.8e-26 123.6 67 91.0
TPR.G21158 Trifolium pratense HOM05D001734 ORTHO05D003483 6.0e-24 116.3 73 76.7
MD14G1180200 Malus domestica HOM05D001734 ORTHO05D003483 2.3e-23 114.4 95 61.1
Lalb_Chr08g0236511 Lupinus albus HOM05D001734 ORTHO05D003483 9.0e-20 102.4 60 75.0
SEGI_06250 Sequoiadendron giganteum HOM05D001734 ORTHO05D003483 2.4e-17 94.4 86 50.0
unitig_0.g1441 Utricularia gibba HOM05D001734 ORTHO05D003483 7.9e-08 62.8 51 47.1


User provided reference genes

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