Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_16091_v3 Cicer arietinum L. HOM05D006543 ORTHO05D008308 7.2e-195 683.7 341 100.0
TPR.G24245 Trifolium pratense HOM05D006543 ORTHO05D008308 2.7e-170 602.1 340 87.4
Psat5g141840 Pisum sativum HOM05D006543 ORTHO05D008308 3.0e-169 598.6 340 86.8
Medtr3g075110 Medicago truncatula HOM05D006543 ORTHO05D008308 1.7e-167 592.8 340 85.6
Glyma.04G192800 Glycine max HOM05D006543 ORTHO05D008308 2.2e-159 565.8 340 82.9
arahy.Tifrunner.gnm1.ann1.8LT8QW Arachis hypogaea HOM05D006543 ORTHO05D008308 4.1e-158 561.6 340 80.9
Lalb_Chr08g0236931 Lupinus albus HOM05D006543 ORTHO05D008308 1.2e-157 560.1 341 81.8
arahy.Tifrunner.gnm1.ann1.YD5AXN Arachis hypogaea HOM05D006543 ORTHO05D008308 2.9e-156 555.4 340 80.0
Phvul.009G169000 Phaseolus vulgaris HOM05D006543 ORTHO05D008308 5.0e-156 554.7 341 80.1
Lj1g0002208 Lotus japonicus HOM05D006543 ORTHO05D008308 1.2e-154 550.1 342 80.4
VMungo1309G1872 Vigna mungo HOM05D006543 ORTHO05D008308 1.8e-145 519.6 318 80.2
RcHm_v2.0_Chr7g0191211 Rosa chinensis HOM05D006543 ORTHO05D008308 2.7e-141 505.8 338 73.1
MD14G1163800 Malus domestica HOM05D006543 ORTHO05D008308 3.5e-141 505.4 338 73.7
Hma1.2p1_0046F.1_g027560 Hydrangea macrophylla HOM05D006543 ORTHO05D008308 6.6e-140 501.1 338 73.7
QL10p005246 Quercus lobata HOM05D006543 ORTHO05D008308 1.5e-139 500.0 338 72.5
Haze_07303 Corylus avellana HOM05D006543 ORTHO05D008308 2.5e-139 499.2 338 72.8
Prupe.5G157200 Prunus persica HOM05D006543 ORTHO05D008308 4.3e-139 498.4 338 71.9
FvH4_5g07331 Fragaria vesca HOM05D006543 ORTHO05D008308 4.7e-138 495.0 338 72.2
Potri.012G092900 Populus trichocarpa HOM05D006543 ORTHO05D008308 1.4e-137 493.4 339 69.3
Sabra12G0067500 Salix brachista HOM05D006543 ORTHO05D008308 1.8e-137 493.0 339 69.3
Ciclev10020014m.g Citrus clementina HOM05D006543 ORTHO05D008308 6.8e-137 491.1 340 70.9
Lj5A100T59 Lonicera japonica HOM05D006543 ORTHO05D008308 5.8e-136 488.0 338 69.8
Manes.06G115100 Manihot esculenta HOM05D006543 ORTHO05D008308 7.5e-136 487.6 338 68.3
CAN.G352.10 Capsicum annuum HOM05D006543 ORTHO05D008308 2.4e-134 482.6 338 68.3
CiPaw.11G012100 Carya illinoinensis HOM05D006543 ORTHO05D008308 3.2e-134 482.3 338 70.1
Oeu045480.1 Olea europaea HOM05D006543 ORTHO05D008308 7.1e-134 481.1 338 68.3
CANSAT80G2173 Cannabis sativa HOM05D006543 ORTHO05D008308 1.2e-133 480.3 340 70.0
PGSC0003DMG400015239 Solanum tuberosum HOM05D006543 ORTHO05D008308 4.6e-133 478.4 338 68.3
Duzib068G0092 Durio zibethinus HOM05D006543 ORTHO05D008308 1.3e-132 476.9 338 69.2
vmacro16708 Vaccinium macrocarpon HOM05D006543 ORTHO05D008308 1.3e-132 476.9 338 70.4
Sopen03g030490 Solanum pennellii HOM05D006543 ORTHO05D008308 1.7e-132 476.5 338 67.8
Actinidia37252 Actinidia chinensis HOM05D006543 ORTHO05D008308 2.3e-132 476.1 338 70.1
COL.COLO4_09265 Corchorus olitorius HOM05D006543 ORTHO05D008308 5.1e-132 474.9 338 67.8
Thecc.03G122600 Theobroma cacao HOM05D006543 ORTHO05D008308 6.6e-132 474.6 338 67.5
Gorai.006G270300 Gossypium raimondii HOM05D006543 ORTHO05D008308 2.5e-131 472.6 338 67.8
Atru.chr9.1008 Acer truncatum HOM05D006543 ORTHO05D008308 3.3e-131 472.2 339 68.1
ECA246G2708 Erigeron canadensis HOM05D006543 ORTHO05D008308 3.3e-131 472.2 339 65.8
Solyc03g111360.3 Solanum lycopersicum HOM05D006543 ORTHO05D008308 3.3e-131 472.2 338 66.9
Cc04_g10340 Coffea canephora HOM05D006543 ORTHO05D008308 5.6e-131 471.5 341 66.9
Nitab4.5_0004750g0040 Nicotiana tabacum HOM05D006543 ORTHO05D008308 5.6e-131 471.5 338 67.5
Dinv11106 Davidia involucrata HOM05D006543 ORTHO05D008308 7.3e-131 471.1 316 72.8
TWI14G0972 Tripterygium wilfordii HOM05D006543 ORTHO05D008308 7.3e-131 471.1 338 68.0
Gohir.A09G244900 Gossypium hirsutum HOM05D006543 ORTHO05D008308 1.2e-130 470.3 338 67.5
HanXRQChr05g0154751 Helianthus annuus HOM05D006543 ORTHO05D008308 4.7e-130 468.4 339 64.3
Peaxi162Scf00089g00625 Petunia axillaris HOM05D006543 ORTHO05D008308 1.8e-129 466.5 341 66.6
Aqoxy5G03584 Aquilegia oxysepala HOM05D006543 ORTHO05D008308 3.1e-129 465.7 339 66.1
MBI06_g38704_MAGBIO Magnolia biondii HOM05D006543 ORTHO05D008308 3.1e-129 465.7 342 66.1
CSS0036636 Camellia sinensis var. sinensis HOM05D006543 ORTHO05D008308 4.0e-129 465.3 338 68.9
Gohir.D09G245800 Gossypium hirsutum HOM05D006543 ORTHO05D008308 4.0e-129 465.3 338 66.6
Lsat_1_v5_gn_5_13221 Lactuca sativa HOM05D006543 ORTHO05D008308 5.2e-129 464.9 340 64.1
Nitab4.5_0003282g0090 Nicotiana tabacum HOM05D006543 ORTHO05D008308 5.2e-129 464.9 338 66.6
Hund18538 Selenicereus undatus HOM05D006543 ORTHO05D008308 1.5e-128 463.4 339 66.7
MSTRG.11294 Avicennia marina HOM05D006543 ORTHO05D008308 2.0e-128 463.0 338 66.0
Sed0023544 Sechium edule HOM05D006543 ORTHO05D008308 2.6e-128 462.6 338 66.6
Rhsim12G0172000 Rhododendron simsii HOM05D006543 ORTHO05D008308 4.4e-128 461.8 338 68.0
THA.LOC104818195 Tarenaya hassleriana HOM05D006543 ORTHO05D008308 1.3e-127 460.3 341 65.4
AT5G63290 Arabidopsis thaliana HOM05D006543 ORTHO05D008308 1.7e-127 459.9 339 64.6
AL8G40370 Arabidopsis lyrata HOM05D006543 ORTHO05D008308 2.2e-127 459.5 339 64.9
BcaNung06574 Brassica carinata HOM05D006543 ORTHO05D008308 3.7e-127 458.8 339 65.8
TAR374G1424 Trochodendron aralioides HOM05D006543 ORTHO05D008308 6.4e-127 458.0 338 66.3
MELO3C026233.2 Cucumis melo HOM05D006543 ORTHO05D008308 1.1e-126 457.2 338 64.2
A09p08200 Brassica napus HOM05D006543 ORTHO05D008308 1.4e-126 456.8 340 65.6
BraA09t36471Z Brassica rapa HOM05D006543 ORTHO05D008308 1.9e-126 456.4 340 65.6
CsaV3_1G000810 Cucumis sativus L. HOM05D006543 ORTHO05D008308 2.4e-126 456.1 338 64.8
Migut.I00467 Erythranthe guttata HOM05D006543 ORTHO05D008308 2.4e-126 456.1 339 65.8
PGR044G1877 Punica granatum HOM05D006543 ORTHO05D008308 3.2e-126 455.7 341 65.1
C09p09260 Brassica napus HOM05D006543 ORTHO05D008308 5.4e-126 454.9 339 65.5
Carub.0008s2404 Capsella rubella HOM05D006543 ORTHO05D008308 5.4e-126 454.9 339 64.9
BolC9t53839H Brassica oleracea HOM05D006543 ORTHO05D008308 7.1e-126 454.5 339 65.5
Sp2g26410 Schrenkiella parvula HOM05D006543 ORTHO05D008308 1.6e-125 453.4 339 64.0
Thhalv10004112m.g Eutrema salsugineum HOM05D006543 ORTHO05D008308 4.6e-125 451.8 339 64.3
GSVIVG01007545001 Vitis vinifera HOM05D006543 ORTHO05D008308 7.8e-125 451.1 338 66.0
AUR62025730 Chenopodium quinoa HOM05D006543 ORTHO05D008308 6.6e-124 448.0 338 63.6
Aa31LG1G18710 Aethionema arabicum HOM05D006543 ORTHO05D008308 3.3e-123 445.7 339 63.7
AUR62001276 Chenopodium quinoa HOM05D006543 ORTHO05D008308 1.2e-122 443.7 338 63.0
EL10Ac7g18072 Beta vulgaris HOM05D006543 ORTHO05D008308 8.1e-122 441.0 338 65.4
ClCG06G017630 Citrullus lanatus HOM05D006543 ORTHO05D008308 4.0e-121 438.7 335 63.0
Sc04g0000970 Simmondsia chinensis HOM05D006543 ORTHO05D008308 1.2e-120 437.2 338 63.9
Zm00001eb001600 Zea mays HOM05D006543 ORTHO05D008308 9.9e-120 434.1 340 62.1
Os12g0270100 Oryza sativa ssp. japonica HOM05D006543 ORTHO05D008308 4.6e-117 425.2 339 61.4
FvH4_5g07462 Fragaria vesca HOM05D006543 ORTHO05D008308 3.0e-116 422.5 338 63.3
CDE04G0939 Ceratophyllum demersum HOM05D006543 ORTHO05D008308 6.6e-116 421.4 341 60.1
SGA_v2.0_scaffold338G49246 Striga asiatica HOM05D006543 ORTHO05D008308 6.6e-116 421.4 338 62.4
unitig_22.g5878 Utricularia gibba HOM05D006543 ORTHO05D008308 1.3e-114 417.2 341 59.8
PSO729G0022 Papaver somniferum HOM05D006543 ORTHO05D008308 8.4e-111 404.4 338 58.9
Ah.15g095320 Amaranthus hybridus HOM05D006543 ORTHO05D008308 5.4e-110 401.7 338 59.8
Lsat_1_v5_gn_4_53181 Lactuca sativa HOM05D006543 ORTHO05D008308 4.3e-107 392.1 354 55.6
Glyma.06G173133 Glycine max HOM05D006543 ORTHO05D008308 7.4e-107 391.3 241 80.5
SEGI_06622 Sequoiadendron giganteum HOM05D006543 ORTHO05D008308 4.6e-101 372.1 375 49.6
Pp3c13_23570 Physcomitrium patens HOM05D006543 ORTHO05D008308 2.2e-95 353.2 339 50.7
vmacro23154 Vaccinium macrocarpon HOM05D006543 ORTHO05D008308 3.0e-92 342.8 252 67.9
Mapoly0005s0190 Marchantia polymorpha HOM05D006543 ORTHO05D008308 2.0e-88 330.1 387 45.5
ATR0733G153 Amborella trichopoda HOM05D006543 ORTHO05D008308 1.1e-86 324.3 362 46.7
CSS0033277 Camellia sinensis var. sinensis HOM05D006543 ORTHO05D008308 2.8e-82 309.7 296 55.7
SMO364G0036 Selaginella moellendorffii HOM05D006543 ORTHO05D008308 5.3e-81 305.4 351 47.9
vmacro16659 Vaccinium macrocarpon HOM05D006543 ORTHO05D008308 6.5e-79 298.5 316 52.8
AagrBONN_evm.TU.Sc2ySwM_344.2040 Anthoceros agrestis HOM05D006543 ORTHO05D008308 1.7e-71 273.9 357 39.2
CBR_g58805 Chara braunii HOM05D006543 ORTHO05D008308 3.0e-68 263.1 331 43.8
Actinidia36787 Actinidia chinensis HOM05D006543 ORTHO05D008308 1.5e-67 260.8 243 56.0
CARHR277160 Cardamine hirsuta HOM05D006543 ORTHO05D008308 3.7e-66 256.1 207 59.4
PRCOL_00001606 Prasinoderma coloniale HOM05D006543 ORTHO05D008308 6.3e-66 255.4 348 39.1
Cre03.g171461 Chlamydomonas reinhardtii HOM05D006543 ORTHO05D008308 1.8e-65 253.8 303 43.6
MCO01G029 Micromonas commoda HOM05D006543 ORTHO05D008308 1.8e-57 227.3 360 36.9
BcaB01g05367 Brassica carinata HOM05D006543 ORTHO05D008308 3.1e-57 226.5 236 53.4
CARHR277150 Cardamine hirsuta HOM05D006543 ORTHO05D008308 4.0e-52 209.5 132 75.8
Oeu045471.1 Olea europaea HOM05D006543 ORTHO05D008308 2.6e-51 206.8 125 74.4
BcaB04g19911 Brassica carinata HOM05D006543 ORTHO05D008308 4.4e-51 206.1 132 74.2
MD06G1157200 Malus domestica HOM05D006543 ORTHO05D008308 1.4e-49 201.1 164 64.0
Oeu037566.1 Olea europaea HOM05D006543 ORTHO05D008308 1.4e-49 201.1 118 77.1
Nn3g16581 Nelumbo nucifera HOM05D006543 ORTHO05D008308 4.4e-43 179.5 123 65.0
FvH4_5g07400 Fragaria vesca HOM05D006543 ORTHO05D008308 6.2e-29 132.5 108 63.0
SEGI_28812 Sequoiadendron giganteum HOM05D006543 ORTHO05D008308 8.9e-28 128.6 90 64.4
CAN.G352.9 Capsicum annuum HOM05D006543 ORTHO05D003127 2.0e-27 127.5 84 72.6
MD06G1156000 Malus domestica HOM05D006543 ORTHO05D008308 1.7e-26 124.4 115 54.8
CAN.G352.8 Capsicum annuum HOM05D006543 ORTHO05D008308 1.7e-23 114.4 98 60.2
Glyma.06G173067 Glycine max HOM05D006543 ORTHO05D008308 4.0e-12 76.6 50 76.0
BcaNung00695 Brassica carinata HOM05D000342 ORTHO05D000217 1.6e-08 64.7 33 84.8
Cfa009975 Carpinus fangiana HOM05D006543 ORTHO05D008308 2.7e-08 63.9 44 63.6


User provided reference genes

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