Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_15193_v3 Cicer arietinum L. HOM05D005614 ORTHO05D006759 6.5e-168 594.0 295 100.0
Medtr3g072430 Medicago truncatula HOM05D005614 ORTHO05D006759 6.5e-152 540.8 293 90.1
Lj1g0021555 Lotus japonicus HOM05D005614 ORTHO05D006759 7.4e-148 527.3 294 88.8
Phvul.009G124300 Phaseolus vulgaris HOM05D005614 ORTHO05D006759 3.7e-147 525.0 293 88.4
Glyma.04G250400 Glycine max HOM05D005614 ORTHO05D006759 3.4e-145 518.5 295 86.4
Glyma.06G112400 Glycine max HOM05D005614 ORTHO05D006759 4.5e-145 518.1 295 87.1
Lalb_Chr23g0270981 Lupinus albus HOM05D005614 ORTHO05D006759 4.7e-142 508.1 295 84.7
arahy.Tifrunner.gnm1.ann1.2VS3GS Arachis hypogaea HOM05D005614 ORTHO05D006759 1.7e-136 489.6 322 77.3
arahy.Tifrunner.gnm1.ann1.MKV7IN Arachis hypogaea HOM05D005614 ORTHO05D006759 1.7e-136 489.6 322 77.3
QL09p035347 Quercus lobata HOM05D005614 ORTHO05D006759 1.2e-126 456.8 295 76.3
RcHm_v2.0_Chr6g0295621 Rosa chinensis HOM05D005614 ORTHO05D006759 1.4e-125 453.4 294 76.5
CiPaw.05G223000 Carya illinoinensis HOM05D005614 ORTHO05D006759 6.8e-125 451.1 290 76.6
Atru.chr13.1437_Atru.chr13.1438 Acer truncatum HOM05D005614 ORTHO05D006759 8.8e-125 450.7 293 74.4
Prupe.1G500100 Prunus persica HOM05D005614 ORTHO05D006759 1.2e-124 450.3 292 76.7
TWI79G0333 Tripterygium wilfordii HOM05D005614 ORTHO05D006759 3.7e-123 445.3 294 74.8
FvH4_2g26720 Fragaria vesca HOM05D005614 ORTHO05D006759 6.3e-123 444.5 294 74.8
MD15G1351400 Malus domestica HOM05D005614 ORTHO05D006759 4.1e-122 441.8 293 75.4
Gohir.A05G234600 Gossypium hirsutum HOM05D005614 ORTHO05D006759 2.7e-121 439.1 292 72.6
Potri.005G176600 Populus trichocarpa HOM05D005614 ORTHO05D006759 5.9e-121 438.0 295 72.9
GSVIVG01008884001 Vitis vinifera HOM05D005614 ORTHO05D006759 7.7e-121 437.6 293 74.7
Gorai.009G245300 Gossypium raimondii HOM05D005614 ORTHO05D006759 1.3e-120 436.8 292 72.6
CANSAT54G1242 Cannabis sativa HOM05D005614 ORTHO05D006759 6.6e-120 434.5 298 73.5
Thecc.08G123600 Theobroma cacao HOM05D005614 ORTHO05D006759 6.6e-120 434.5 292 72.3
PGR042G1492 Punica granatum HOM05D005614 ORTHO05D006759 1.1e-119 433.7 291 73.5
Sed0025863 Sechium edule HOM05D005614 ORTHO05D006759 4.0e-117 425.2 292 72.9
Ciclev10002002m.g Citrus clementina HOM05D005614 ORTHO05D006759 5.2e-117 424.9 296 70.9
Sc01g0001200 Simmondsia chinensis HOM05D005614 ORTHO05D006759 1.5e-116 423.3 307 69.7
Cpa.g.sc36.54 Carica papaya HOM05D005614 ORTHO05D006759 3.7e-115 418.7 292 68.8
Thhalv10008316m.g Eutrema salsugineum HOM05D005614 ORTHO05D006759 8.3e-115 417.5 297 70.0
THA.LOC104806819 Tarenaya hassleriana HOM05D005614 ORTHO05D006759 1.1e-114 417.2 293 68.6
PSO782G2082 Papaver somniferum HOM05D005614 ORTHO05D006759 1.4e-114 416.8 299 69.6
PSO170G2981 Papaver somniferum HOM05D005614 ORTHO05D006759 2.4e-114 416.0 299 68.9
CsaV3_2G009350 Cucumis sativus L. HOM05D005614 ORTHO05D006759 5.4e-114 414.8 272 75.7
Sp1g16310 Schrenkiella parvula HOM05D005614 ORTHO05D006759 9.2e-114 414.1 297 69.7
FAN27G1664 Fragaria x ananassa HOM05D005614 ORTHO05D006759 1.2e-113 413.7 315 68.3
CARHR138110 Cardamine hirsuta HOM05D005614 ORTHO05D006759 2.7e-113 412.5 297 68.7
FAN15G2492 Fragaria x ananassa HOM05D005614 ORTHO05D006759 3.5e-113 412.1 315 68.3
AL1G30720 Arabidopsis lyrata HOM05D005614 ORTHO05D006759 7.8e-113 411.0 298 68.8
AT1G18340 Arabidopsis thaliana HOM05D005614 ORTHO05D006759 7.8e-113 411.0 298 68.8
BcaB03g12976 Brassica carinata HOM05D005614 ORTHO05D006759 3.8e-112 408.7 298 69.1
ClCG08G005590 Citrullus lanatus HOM05D005614 ORTHO05D006759 6.6e-112 407.9 329 65.0
TAR628G1424 Trochodendron aralioides HOM05D005614 ORTHO05D006759 1.1e-111 407.1 292 69.5
BolC8t49486H Brassica oleracea HOM05D005614 ORTHO05D006759 1.5e-111 406.8 300 68.3
Dinv07241 Davidia involucrata HOM05D005614 ORTHO05D006759 1.9e-111 406.4 294 69.4
Sed0022578 Sechium edule HOM05D005614 ORTHO05D006759 3.3e-111 405.6 304 68.8
Carub.0001s1797 Capsella rubella HOM05D005614 ORTHO05D006759 7.3e-111 404.4 299 67.6
BcaB07g31845 Brassica carinata HOM05D005614 ORTHO05D006759 1.2e-110 403.7 297 68.7
Aa31LG6G9300 Aethionema arabicum HOM05D005614 ORTHO05D006759 4.7e-110 401.7 294 66.7
FAN20G0890 Fragaria x ananassa HOM05D005614 ORTHO05D006759 4.7e-110 401.7 272 72.4
Actinidia03480 Actinidia chinensis HOM05D005614 ORTHO05D006759 4.0e-109 398.7 295 68.1
C08p18540 Brassica napus HOM05D005614 ORTHO05D006759 1.2e-108 397.1 291 68.7
A06p14370 Brassica napus HOM05D005614 ORTHO05D006759 2.0e-108 396.4 297 67.3
BraA08t34975Z Brassica rapa HOM05D005614 ORTHO05D006759 2.0e-108 396.4 294 67.3
HanXRQChr02g0053121 Helianthus annuus HOM05D005614 ORTHO05D006759 2.0e-108 396.4 293 66.9
C05p16610 Brassica napus HOM05D005614 ORTHO05D006759 2.6e-108 396.0 297 67.3
BraA06t24565Z Brassica rapa HOM05D005614 ORTHO05D006759 4.4e-108 395.2 297 67.3
HanXRQChr16g0532671 Helianthus annuus HOM05D005614 ORTHO05D006759 5.8e-108 394.8 295 67.8
Aqoxy7G02121 Aquilegia oxysepala HOM05D005614 ORTHO05D006759 7.5e-108 394.4 300 67.0
BolC5t30360H Brassica oleracea HOM05D005614 ORTHO05D006759 9.8e-108 394.0 297 67.3
BcaC05g25728 Brassica carinata HOM05D005614 ORTHO05D006759 1.3e-107 393.7 299 66.6
A08p30430 Brassica napus HOM05D005614 ORTHO05D006759 3.7e-107 392.1 291 67.7
CSS0036035 Camellia sinensis var. sinensis HOM05D005614 ORTHO05D006759 3.7e-107 392.1 297 66.0
ECA246G0276 Erigeron canadensis HOM05D005614 ORTHO05D006759 6.4e-107 391.3 295 68.1
CARHR018930 Cardamine hirsuta HOM05D005614 ORTHO05D006759 8.3e-107 391.0 294 66.0
RhsimUnG0093400 Rhododendron simsii HOM05D005614 ORTHO05D006759 8.3e-107 391.0 296 66.9
CAN.G628.77 Capsicum annuum HOM05D005614 ORTHO05D006759 1.0e-104 384.0 296 66.2
PGSC0003DMG400026996 Solanum tuberosum HOM05D005614 ORTHO05D006759 3.9e-104 382.1 295 65.8
Cc04_g13870 Coffea canephora HOM05D005614 ORTHO05D006759 5.0e-104 381.7 290 66.9
Solyc06g071450.4 Solanum lycopersicum HOM05D005614 ORTHO05D006759 8.6e-104 380.9 295 65.4
CSS0020697 Camellia sinensis var. sinensis HOM05D005614 ORTHO05D006759 1.5e-103 380.2 298 64.8
COL.COLO4_35944 Corchorus olitorius HOM05D005614 ORTHO05D006759 4.3e-103 378.6 253 72.3
Migut.D01926 Erythranthe guttata HOM05D005614 ORTHO05D006759 1.2e-102 377.1 297 66.0
Sopen06g027730 Solanum pennellii HOM05D005614 ORTHO05D006759 1.2e-102 377.1 295 64.7
Nitab4.5_0000866g0090 Nicotiana tabacum HOM05D005614 ORTHO05D006759 2.1e-102 376.3 315 62.5
DCAR_017415 Daucus carota HOM05D005614 ORTHO05D006759 3.6e-102 375.6 295 66.4
SalBow3G0912 Salvia bowleyana HOM05D005614 ORTHO05D006759 4.7e-102 375.2 295 66.4
Oeu024691.1 Olea europaea HOM05D005614 ORTHO05D006759 4.0e-101 372.1 280 67.1
HPP92_013333 Vanilla planifolia HOM05D005614 ORTHO05D006759 4.0e-101 372.1 305 63.0
Rhsim11G0047100 Rhododendron simsii HOM05D005614 ORTHO05D006759 2.9e-99 365.9 280 66.1
Manes.02G162200 Manihot esculenta HOM05D005614 ORTHO05D006759 4.1e-98 362.1 241 74.3
Duzib041G0760 Durio zibethinus HOM05D005614 ORTHO05D006759 1.6e-97 360.1 292 62.0
Os02g0125800 Oryza sativa ssp. japonica HOM05D005614 ORTHO05D006759 4.6e-97 358.6 290 60.3
Nitab4.5_0001017g0060 Nicotiana tabacum HOM05D005614 ORTHO05D006759 1.0e-96 357.5 295 63.4
vmacro14329 Vaccinium macrocarpon HOM05D005614 ORTHO05D006759 1.3e-96 357.1 283 65.4
ATR0684G165 Amborella trichopoda HOM05D005614 ORTHO05D006759 3.0e-96 355.9 276 65.9
Zm00001eb208710 Zea mays HOM05D005614 ORTHO05D006759 9.5e-95 350.9 298 59.7
Duzib093G1836 Durio zibethinus HOM05D005614 ORTHO05D006759 1.1e-90 337.4 319 57.7
AUR62027890 Chenopodium quinoa HOM05D005614 ORTHO05D006759 6.6e-88 328.2 248 66.1
Gohir.D05G236900 Gossypium hirsutum HOM05D005614 ORTHO05D006759 8.6e-88 327.8 207 74.4
EL10Ac1g01047 Beta vulgaris HOM05D005614 ORTHO05D006759 1.1e-87 327.4 303 57.8
Nn8g39974 Nelumbo nucifera HOM05D005614 ORTHO05D006759 3.4e-84 315.8 273 62.3
Ah.05g170870 Amaranthus hybridus HOM05D005614 ORTHO05D006759 5.8e-84 315.1 247 66.4
Hund27024 Selenicereus undatus HOM05D005614 ORTHO05D006759 5.8e-84 315.1 246 66.7
MELO3C008774.2 Cucumis melo HOM05D005614 ORTHO05D006759 4.9e-83 312.0 208 74.0
Lsat_1_v5_gn_3_69700 Lactuca sativa HOM05D005614 ORTHO05D006759 6.4e-83 311.6 241 68.0
TPR.G24041 Trifolium pratense HOM05D005614 ORTHO05D006759 5.4e-82 308.5 175 86.9
Mapoly0044s0012 Marchantia polymorpha HOM05D005614 ORTHO05D006759 4.6e-81 305.4 300 53.0
SalBow7G1071 Salvia bowleyana HOM05D005614 ORTHO05D006759 1.1e-79 300.8 245 65.7
Pp3c2_3680 Physcomitrium patens HOM05D005614 ORTHO05D006759 4.7e-78 295.4 303 49.5
Eucgr.G01112 Eucalyptus grandis HOM05D005614 ORTHO05D006759 5.3e-77 292.0 215 67.9
BcaNung05442 Brassica carinata HOM05D005614 ORTHO05D006759 7.6e-76 288.1 221 65.2
FAN24G3468 Fragaria x ananassa HOM05D005614 ORTHO05D006759 4.2e-74 282.3 434 43.5
Psat5g132360 Pisum sativum HOM05D005614 ORTHO05D006759 2.1e-73 280.0 161 84.5
AUR62019050 Chenopodium quinoa HOM05D005614 ORTHO05D006759 2.4e-69 266.5 248 57.3
CBR_g36358 Chara braunii HOM05D005614 ORTHO05D006759 4.5e-68 262.3 310 47.1
Sabra05G0133300 Salix brachista HOM05D005614 ORTHO05D006759 9.9e-68 261.2 311 50.2
SGA_v2.0_scaffold31G12915 Striga asiatica HOM05D005614 ORTHO05D006759 4.6e-65 252.3 216 62.0
Nitab4.5_0000003g0570 Nicotiana tabacum HOM05D005614 ORTHO05D006759 6.7e-64 248.4 238 58.0
Haze_00457 Corylus avellana HOM05D005614 ORTHO05D006759 1.3e-62 244.2 178 71.3
Oeu022164.1 Olea europaea HOM05D005614 ORTHO05D006759 1.8e-61 240.4 148 75.0
MBI03_g33030_MAGBIO Magnolia biondii HOM05D005614 ORTHO05D006759 3.1e-61 239.6 252 54.8
CDE06G0499 Ceratophyllum demersum HOM05D005614 ORTHO05D006759 4.2e-58 229.2 186 62.9
Psat5g132400 Pisum sativum HOM05D005614 ORTHO05D006759 2.7e-57 226.5 124 88.7
Peaxi162Scf00689g00225 Petunia axillaris HOM05D005614 ORTHO05D006759 1.3e-56 224.2 221 57.0
TPR.G40310 Trifolium pratense HOM05D001808 ORTHO05D001747 1.9e-55 220.3 111 93.7
vmacro00825 Vaccinium macrocarpon HOM05D005614 ORTHO05D006759 3.7e-54 216.1 233 54.9
TWI75G0111 Tripterygium wilfordii HOM05D005614 ORTHO05D006759 9.0e-53 211.5 200 60.0
Ca_31116_v3 Cicer arietinum L. HOM05D005614 ORTHO05D006759 8.5e-43 178.3 92 98.9
CDE12G0551 Ceratophyllum demersum HOM05D005614 ORTHO05D006759 5.5e-42 175.6 129 64.3
Lj4A622G15 Lonicera japonica HOM05D005614 ORTHO05D006759 2.8e-38 163.3 95 82.1
Cre03.g172050 Chlamydomonas reinhardtii HOM05D005614 ORTHO05D006759 6.9e-37 158.7 287 38.0
SEGI_11087 Sequoiadendron giganteum HOM05D005614 ORTHO05D006759 1.1e-34 151.4 96 72.9
Haze_00458 Corylus avellana HOM05D005614 ORTHO05D006759 2.3e-32 143.7 80 80.0
Cfa025530 Carpinus fangiana HOM05D005614 ORTHO05D006759 2.2e-30 137.1 312 32.1
SMO358G0086 Selaginella moellendorffii HOM05D005614 ORTHO05D006759 1.2e-28 131.3 156 48.7
SEGI_10746 Sequoiadendron giganteum HOM05D005614 ORTHO05D006759 1.2e-28 131.3 152 52.6
QL09p036498 Quercus lobata HOM05D005614 ORTHO05D006759 7.7e-28 128.6 70 84.3
Lj4A622G16 Lonicera japonica HOM05D005614 ORTHO05D006759 2.1e-25 120.6 122 55.7
MCO01G384 Micromonas commoda HOM05D005614 ORTHO05D006759 4.7e-25 119.4 245 33.9
PRCOL_00005856 Prasinoderma coloniale HOM05D005614 ORTHO05D006759 1.4e-24 117.9 133 46.6
TPR.G32 Trifolium pratense HOM05D005614 ORTHO05D006759 3.5e-12 76.6 31 100.0
CAN.G964.16 Capsicum annuum HOM05D005614 ORTHO05D006759 1.0e-11 75.1 101 46.5
RhsimUnG0102200 Rhododendron simsii HOM05D005614 ORTHO05D006759 6.1e-09 65.9 89 46.1
Rhsim02G0185400 Rhododendron simsii HOM05D005614 ORTHO05D006759 8.8e-08 62.0 86 44.2
Rhsim03G0117800 Rhododendron simsii HOM05D005614 ORTHO05D006759 4.4e-07 59.7 54 53.7


User provided reference genes

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