Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_14897_v3 Cicer arietinum L. HOM05D001007 ORTHO05D006705 1.4e-209 732.6 357 100.0
Psat5g162480 Pisum sativum HOM05D001007 ORTHO05D006705 6.6e-167 590.9 356 83.4
Medtr3g462290 Medicago truncatula HOM05D001007 ORTHO05D006705 2.1e-160 569.3 355 79.7
TPR.G30104 Trifolium pratense HOM05D001007 ORTHO05D006705 9.3e-153 543.9 357 77.9
Lj6g0017433 Lotus japonicus HOM05D001007 ORTHO05D006705 1.7e-151 539.7 356 75.3
Glyma.18G067400 Glycine max HOM05D001007 ORTHO05D006705 1.1e-148 530.4 359 73.8
Phvul.006G063900 Phaseolus vulgaris HOM05D001007 ORTHO05D006705 8.7e-135 484.2 359 69.6
VMungo0540G2128 Vigna mungo HOM05D001007 ORTHO05D006705 3.1e-132 475.7 359 67.7
Lalb_Chr20g0115061 Lupinus albus HOM05D001007 ORTHO05D006705 1.3e-130 470.3 359 68.2
arahy.Tifrunner.gnm1.ann1.MGB2DA Arachis hypogaea HOM05D001007 ORTHO05D006705 6.9e-124 448.0 357 65.0
arahy.Tifrunner.gnm1.ann1.SSF8HC Arachis hypogaea HOM05D001007 ORTHO05D006705 2.6e-123 446.0 357 65.0
QL01p027375 Quercus lobata HOM05D001007 ORTHO05D006705 3.9e-111 405.6 363 60.1
Cfa011634 Carpinus fangiana HOM05D001007 ORTHO05D006705 2.8e-109 399.4 373 58.2
Haze_24239 Corylus avellana HOM05D001007 ORTHO05D006705 1.2e-107 394.0 379 56.5
MD03G1077900 Malus domestica HOM05D001007 ORTHO05D006705 4.5e-107 392.1 365 57.8
CSS0032887 Camellia sinensis var. sinensis HOM05D001007 ORTHO05D006705 7.2e-105 384.8 373 56.8
MD11G1082500 Malus domestica HOM05D001007 ORTHO05D006705 2.3e-103 379.8 362 55.8
Potri.009G041200 Populus trichocarpa HOM05D001007 ORTHO05D006705 5.2e-103 378.6 363 55.9
CsaV3_1G035960 Cucumis sativus L. HOM05D001007 ORTHO05D006705 7.5e-102 374.8 366 57.7
CiPaw.13G082700 Carya illinoinensis HOM05D001007 ORTHO05D006705 8.2e-101 371.3 363 57.3
Sabra09G0029000 Salix brachista HOM05D001007 ORTHO05D006705 1.1e-100 370.9 364 55.5
Atru.chr3.4061 Acer truncatum HOM05D001007 ORTHO05D006705 2.4e-100 369.8 378 54.2
TAR369G0542 Trochodendron aralioides HOM05D001007 ORTHO05D006705 2.4e-100 369.8 364 55.2
ClCG03G000980 Citrullus lanatus HOM05D001007 ORTHO05D006705 3.1e-100 369.4 366 57.1
Manes.01G165300 Manihot esculenta HOM05D001007 ORTHO05D006705 3.1e-100 369.4 363 54.5
Hma1.2p1_0227F.1_g096160 Hydrangea macrophylla HOM05D001007 ORTHO05D006705 7.0e-100 368.2 369 56.4
Prupe.6G062900 Prunus persica HOM05D001007 ORTHO05D006705 9.1e-100 367.9 364 56.0
Duzib170G0956 Durio zibethinus HOM05D001007 ORTHO05D006705 2.7e-99 366.3 362 53.9
TWI79G0297 Tripterygium wilfordii HOM05D001007 ORTHO05D006705 2.7e-99 366.3 360 55.8
FvH4_3g37880 Fragaria vesca HOM05D001007 ORTHO05D006705 3.5e-99 365.9 367 55.6
COL.COLO4_19087 Corchorus olitorius HOM05D001007 ORTHO05D006705 1.3e-98 364.0 363 54.3
CANSAT54G2449 Cannabis sativa HOM05D001007 ORTHO05D006705 2.2e-98 363.2 375 53.6
MELO3C020571.2 Cucumis melo HOM05D001007 ORTHO05D006705 2.9e-98 362.8 370 55.9
Actinidia25132 Actinidia chinensis HOM05D001007 ORTHO05D006705 3.8e-98 362.5 373 54.2
Sed0027946 Sechium edule HOM05D001007 ORTHO05D006705 3.8e-98 362.5 366 54.6
RcHm_v2.0_Chr5g0068091 Rosa chinensis HOM05D001007 ORTHO05D006705 5.0e-98 362.1 367 55.3
Cpa.g.sc112.71 Carica papaya HOM05D001007 ORTHO05D006705 6.5e-98 361.7 369 53.4
vmacro02999 Vaccinium macrocarpon HOM05D001007 ORTHO05D006705 2.5e-97 359.8 374 54.8
Ciclev10027687m.g Citrus clementina HOM05D001007 ORTHO05D006705 2.1e-96 356.7 362 54.7
Lj2A1128G41 Lonicera japonica HOM05D001007 ORTHO05D006705 3.6e-96 355.9 381 52.2
Thecc.09G307300 Theobroma cacao HOM05D001007 ORTHO05D006705 4.7e-96 355.5 362 52.8
Nn2g11355 Nelumbo nucifera HOM05D001007 ORTHO05D006705 6.1e-96 355.1 365 54.2
Gohir.D03G118700 Gossypium hirsutum HOM05D001007 ORTHO05D006705 8.0e-96 354.8 363 52.3
PGR102G0557 Punica granatum HOM05D001007 ORTHO05D006705 8.0e-96 354.8 366 53.6
Gohir.A03G048400 Gossypium hirsutum HOM05D001007 ORTHO05D006705 1.0e-95 354.4 363 52.1
Peaxi162Scf00842g00018 Petunia axillaris HOM05D001007 ORTHO05D006705 2.3e-95 353.2 372 51.1
Cc01_g13740 Coffea canephora HOM05D001007 ORTHO05D006705 3.0e-95 352.8 372 50.3
Eucgr.B02279 Eucalyptus grandis HOM05D001007 ORTHO05D006705 5.2e-95 352.1 360 52.5
CAN.G538.2 Capsicum annuum HOM05D001007 ORTHO05D006705 9.8e-94 347.8 375 51.7
EL10Ac7g16109 Beta vulgaris HOM05D001007 ORTHO05D006705 1.7e-93 347.1 359 51.5
FAN25G0707 Fragaria x ananassa HOM05D001007 ORTHO05D006705 1.7e-93 347.1 342 57.0
Solyc06g005990.4 Solanum lycopersicum HOM05D001007 ORTHO05D006705 2.2e-93 346.7 375 50.9
Sopen06g001970 Solanum pennellii HOM05D001007 ORTHO05D006705 2.8e-93 346.3 375 50.9
Gorai.003G125100 Gossypium raimondii HOM05D001007 ORTHO05D006705 3.7e-93 345.9 362 52.2
MSTRG.18565 Avicennia marina HOM05D001007 ORTHO05D006705 1.1e-92 344.4 362 50.3
MBI05_g03442_MAGBIO Magnolia biondii HOM05D001007 ORTHO05D006705 1.1e-92 344.4 366 53.3
FAN11G3969 Fragaria x ananassa HOM05D001007 ORTHO05D006705 5.4e-92 342.0 342 57.0
SGA_v2.0_scaffold20G09308 Striga asiatica HOM05D001007 ORTHO05D006705 5.4e-92 342.0 364 51.9
Ah.08g220450 Amaranthus hybridus HOM05D001007 ORTHO05D006705 1.2e-91 340.9 366 50.3
FAN21G1509 Fragaria x ananassa HOM05D001007 ORTHO05D006705 2.2e-90 336.7 357 54.9
AUR62001703 Chenopodium quinoa HOM05D001007 ORTHO05D006705 7.2e-89 331.6 362 49.4
PSO384G0462 Papaver somniferum HOM05D001007 ORTHO05D006705 7.2e-89 331.6 355 50.4
AT3G46960 Arabidopsis thaliana HOM05D001007 ORTHO05D006705 6.1e-88 328.6 369 49.6
Carub.0005s1318 Capsella rubella HOM05D001007 ORTHO05D006705 1.4e-87 327.4 368 50.0
PSO339G3632 Papaver somniferum HOM05D001007 ORTHO05D006705 2.3e-87 326.6 355 49.9
Oeu035015.2 Olea europaea HOM05D001007 ORTHO05D006705 4.0e-87 325.9 400 47.2
THA.LOC104814901 Tarenaya hassleriana HOM05D001007 ORTHO05D006705 4.0e-87 325.9 366 49.5
Aqoxy1G00722 Aquilegia oxysepala HOM05D001007 ORTHO05D006705 1.2e-86 324.3 372 48.4
Migut.D00864 Erythranthe guttata HOM05D001007 ORTHO05D006705 1.5e-86 323.9 371 48.8
AL5G26180 Arabidopsis lyrata HOM05D001007 ORTHO05D006705 2.0e-86 323.6 369 49.3
Aa31LG4G15900 Aethionema arabicum HOM05D001007 ORTHO05D006705 1.7e-85 320.5 373 48.0
Rhsim13G0073900 Rhododendron simsii HOM05D001007 ORTHO05D006705 1.7e-85 320.5 402 49.8
CARHR155590 Cardamine hirsuta HOM05D001007 ORTHO05D006705 4.9e-85 318.9 371 48.2
GSVIVG01024808001 Vitis vinifera HOM05D001007 ORTHO05D006705 2.4e-84 316.6 265 61.5
Thhalv10010069m.g Eutrema salsugineum HOM05D001007 ORTHO05D006705 4.1e-84 315.8 369 48.0
Lsat_1_v5_gn_4_65480 Lactuca sativa HOM05D001007 ORTHO05D006705 4.5e-83 312.4 373 48.8
DCAR_015644 Daucus carota HOM05D001007 ORTHO05D006705 1.4e-79 300.8 373 48.3
HanXRQChr10g0294221 Helianthus annuus HOM05D001007 ORTHO05D006705 2.3e-79 300.1 374 47.1
A06p20600 Brassica napus HOM05D001007 ORTHO05D006705 1.7e-77 293.9 363 45.5
BraA06t25139Z Brassica rapa HOM05D001007 ORTHO05D006705 2.2e-77 293.5 363 44.6
Sp5g14780 Schrenkiella parvula HOM05D001007 ORTHO05D006705 3.7e-77 292.7 367 46.0
ECA234G1277 Erigeron canadensis HOM05D001007 ORTHO05D006705 3.2e-76 289.7 363 46.0
Nitab4.5_0002405g0030 Nicotiana tabacum HOM05D001007 ORTHO05D006705 2.7e-75 286.6 329 49.5
Sc12g0000990 Simmondsia chinensis HOM05D001007 ORTHO05D006705 2.3e-74 283.5 320 48.8
BolC3t19398H Brassica oleracea HOM05D001007 ORTHO05D006705 6.6e-74 282.0 367 43.1
C03p71130 Brassica napus HOM05D001007 ORTHO05D006705 5.6e-73 278.9 367 42.8
CDE07G1123 Ceratophyllum demersum HOM05D001007 ORTHO05D006705 4.7e-64 249.2 267 48.7
ATR0618G385 Amborella trichopoda HOM05D001007 ORTHO05D006705 2.0e-62 243.8 444 36.3
Zm00001eb232660 Zea mays HOM05D001007 ORTHO05D006705 1.9e-57 227.3 391 36.8
Nitab4.5_0000880g0030 Nicotiana tabacum HOM05D001007 ORTHO05D006705 3.5e-51 206.5 296 42.2
Mapoly0005s0056 Marchantia polymorpha HOM05D001007 ORTHO05D006705 5.1e-50 202.6 376 35.9
Dinv28598 Davidia involucrata HOM05D001007 ORTHO05D006705 2.8e-48 196.8 249 48.2
SMO364G0835 Selaginella moellendorffii HOM05D001007 ORTHO05D006705 3.8e-45 186.4 363 32.5
Pp3c20_11040 Physcomitrium patens HOM05D001007 ORTHO05D006705 3.2e-44 183.3 372 33.9
HPP92_015336 Vanilla planifolia HOM05D001007 ORTHO05D023068 2.8e-40 170.2 134 59.7
HPP92_015299 Vanilla planifolia HOM05D001007 ORTHO05D023068 8.1e-40 168.7 134 59.0
SHI05888 Sapria himalayana HOM05D001007 ORTHO05D006705 2.9e-37 160.2 226 42.0
AagrBONN_evm.TU.Sc2ySwM_228.608 Anthoceros agrestis HOM05D001007 ORTHO05D006705 1.9e-36 157.5 387 30.0
unitig_0.g809 Utricularia gibba HOM05D001007 ORTHO05D023068 4.8e-16 89.7 189 31.7
Glyma.08G265967 Glycine max HOM05D005120 ORTHO05D006174 1.2e-14 85.1 58 63.8
GSVIVG01024809001 Vitis vinifera HOM05D001007 ORTHO05D006705 2.6e-14 84.0 87 55.2
AUR62020078 Chenopodium quinoa HOM05D001007 ORTHO05D006705 5.9e-14 82.8 113 44.2
SHI05887 Sapria himalayana HOM05D001007 ORTHO05D023068 1.3e-08 65.1 45 64.4
CDE07G0187 Ceratophyllum demersum HOM05D001007 ORTHO05D006705 6.3e-08 62.8 43 62.8
Peaxi162Scf00842g00017 Petunia axillaris HOM05D001007 ORTHO05D023068 6.9e-07 59.3 44 52.3
Cfa026548 Carpinus fangiana HOM05D001007 ORTHO05D006705 1.2e-06 58.5 344 26.2
SEGI_29030 Sequoiadendron giganteum HOM05D001007 ORTHO05D006705 1.2e-06 58.5 61 45.9
Sc23g0002050 Simmondsia chinensis HOM05D001007 ORTHO05D006705 1.2e-06 58.5 61 49.2
Lsat_1_v5_gn_6_118221 Lactuca sativa HOM05D001108 ORTHO05D036465 2.6e-06 57.4 71 50.7


User provided reference genes

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