Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_08047_v3 Cicer arietinum L. HOM05D004270 ORTHO05D005037 7.0e-167 590.5 291 100.0
Ca_08053_v3 Cicer arietinum L. HOM05D004270 ORTHO05D005037 7.0e-167 590.5 291 100.0
Psat3g099560 Pisum sativum HOM05D004270 ORTHO05D005037 1.2e-161 573.2 291 96.6
Medtr7g081220 Medicago truncatula HOM05D004270 ORTHO05D005037 2.4e-159 565.5 291 95.2
TPR.G21772 Trifolium pratense HOM05D004270 ORTHO05D005037 2.4e-159 565.5 291 96.2
Lj1g0019682 Lotus japonicus HOM05D004270 ORTHO05D005037 6.0e-158 560.8 291 94.2
TPR.G29107 Trifolium pratense HOM05D004270 ORTHO05D005037 2.3e-157 558.9 291 95.9
arahy.Tifrunner.gnm1.ann1.D5XWDC Arachis hypogaea HOM05D004270 ORTHO05D005037 1.1e-156 556.6 291 92.1
arahy.Tifrunner.gnm1.ann1.PIH8R2 Arachis hypogaea HOM05D004270 ORTHO05D005037 4.3e-156 554.7 291 91.8
CiPaw.14G018200 Carya illinoinensis HOM05D004270 ORTHO05D005037 1.2e-155 553.1 291 90.7
Thecc.06G006500 Theobroma cacao HOM05D004270 ORTHO05D005037 1.4e-154 549.7 291 89.7
VMungo1383G2841 Vigna mungo HOM05D004270 ORTHO05D005037 1.8e-154 549.3 291 91.1
Potri.005G199100 Populus trichocarpa HOM05D004270 ORTHO05D005037 2.0e-153 545.8 291 91.1
Glyma.09G244900 Glycine max HOM05D004270 ORTHO05D005037 2.6e-153 545.4 292 91.1
Ciclev10005458m.g Citrus clementina HOM05D004270 ORTHO05D005037 4.4e-153 544.7 291 90.4
Phvul.008G049000 Phaseolus vulgaris HOM05D004270 ORTHO05D005037 2.2e-152 542.3 288 91.0
Potri.002G061900 Populus trichocarpa HOM05D004270 ORTHO05D005037 4.9e-152 541.2 291 90.0
Thhalv10008359m.g Eutrema salsugineum HOM05D004270 ORTHO05D005037 6.4e-152 540.8 290 89.7
Nn6g34391 Nelumbo nucifera HOM05D004270 ORTHO05D005037 6.4e-152 540.8 290 90.0
ClCG03G001640 Citrullus lanatus HOM05D004270 ORTHO05D005037 8.4e-152 540.4 288 90.3
THA.LOC104812380 Tarenaya hassleriana HOM05D004270 ORTHO05D005037 2.4e-151 538.9 288 89.2
Duzib268G0296 Durio zibethinus HOM05D004270 ORTHO05D005037 4.2e-151 538.1 291 88.0
GSVIVG01036737001 Vitis vinifera HOM05D004270 ORTHO05D005037 5.4e-151 537.7 291 88.3
TAR636G3127 Trochodendron aralioides HOM05D004270 ORTHO05D005037 1.2e-150 536.6 291 88.3
AT1G79500 Arabidopsis thaliana HOM05D004270 ORTHO05D005037 2.7e-150 535.4 291 88.7
arahy.Tifrunner.gnm1.ann1.WIVF2E Arachis hypogaea HOM05D004270 ORTHO05D005037 2.7e-150 535.4 298 86.9
RcHm_v2.0_Chr5g0023881 Rosa chinensis HOM05D004270 ORTHO05D005037 2.7e-150 535.4 291 88.7
TWI12G0564 Tripterygium wilfordii HOM05D004270 ORTHO05D005037 2.7e-150 535.4 291 89.3
Duzib187G1348 Durio zibethinus HOM05D004270 ORTHO05D005037 3.5e-150 535.0 291 88.7
Migut.H01658 Erythranthe guttata HOM05D004270 ORTHO05D005037 1.0e-149 533.5 289 88.6
FvH4_3g14500 Fragaria vesca HOM05D004270 ORTHO05D005037 1.0e-149 533.5 291 88.3
Gohir.D08G090400 Gossypium hirsutum HOM05D004270 ORTHO05D005037 1.0e-149 533.5 288 88.9
Prupe.4G129800 Prunus persica HOM05D004270 ORTHO05D005037 1.0e-149 533.5 288 88.5
AUR62009294 Chenopodium quinoa HOM05D004270 ORTHO05D005037 1.3e-149 533.1 291 88.3
Sabra05G0151600 Salix brachista HOM05D004270 ORTHO05D005037 1.3e-149 533.1 312 84.3
Sp5g34553 Schrenkiella parvula HOM05D004270 ORTHO05D005037 1.3e-149 533.1 291 88.3
CANSAT78G1193 Cannabis sativa HOM05D004270 ORTHO05D005037 1.7e-149 532.7 288 88.2
Manes.03G080050 Manihot esculenta HOM05D004270 ORTHO05D005037 2.3e-149 532.3 291 88.0
Atru.chr1.67 Acer truncatum HOM05D004270 ORTHO05D005037 3.0e-149 531.9 291 88.3
AL2G40110 Arabidopsis lyrata HOM05D004270 ORTHO05D005037 3.9e-149 531.6 291 88.0
Carub.0002s2636 Capsella rubella HOM05D004270 ORTHO05D005037 3.9e-149 531.6 291 88.0
CsaV3_1G034040 Cucumis sativus L. HOM05D004270 ORTHO05D005037 3.9e-149 531.6 288 88.9
CARHR073160 Cardamine hirsuta HOM05D004270 ORTHO05D005037 5.1e-149 531.2 291 88.7
Thhalv10018956m.g Eutrema salsugineum HOM05D004270 ORTHO05D005037 5.1e-149 531.2 291 88.0
Gorai.004G095400 Gossypium raimondii HOM05D004270 ORTHO05D005037 5.1e-149 531.2 288 88.5
FAN25G1815 Fragaria x ananassa HOM05D004270 ORTHO05D005037 6.6e-149 530.8 291 88.0
MD10G1213400 Malus domestica HOM05D004270 ORTHO05D005037 6.6e-149 530.8 291 87.6
Sc15g0006060 Simmondsia chinensis HOM05D004270 ORTHO05D005037 6.6e-149 530.8 291 86.9
MELO3C020651.2 Cucumis melo HOM05D004270 ORTHO05D005037 8.7e-149 530.4 288 88.9
BcaB02g07218 Brassica carinata HOM05D004270 ORTHO05D005037 2.5e-148 528.9 291 87.6
Sed0021681 Sechium edule HOM05D004270 ORTHO05D005037 3.3e-148 528.5 288 87.8
Actinidia07391 Actinidia chinensis HOM05D004270 ORTHO05D005037 4.3e-148 528.1 291 86.9
CSS0035574 Camellia sinensis var. sinensis HOM05D004270 ORTHO05D005037 4.3e-148 528.1 288 88.2
AUR62041708 Chenopodium quinoa HOM05D004270 ORTHO05D005037 4.3e-148 528.1 291 87.6
AUR62043393 Chenopodium quinoa HOM05D004270 ORTHO05D005037 4.3e-148 528.1 291 87.6
Gohir.A08G080300 Gossypium hirsutum HOM05D004270 ORTHO05D005037 7.3e-148 527.3 288 87.8
PSO675G6017 Papaver somniferum HOM05D004270 ORTHO05D005037 7.3e-148 527.3 290 88.3
Aqoxy7G03543 Aquilegia oxysepala HOM05D004270 ORTHO05D005037 9.6e-148 526.9 287 87.8
BcaC03g15900 Brassica carinata HOM05D004270 ORTHO05D005037 9.6e-148 526.9 291 86.9
DCAR_016846 Daucus carota HOM05D004270 ORTHO05D005037 1.6e-147 526.2 291 86.3
HanXRQChr14g0449761 Helianthus annuus HOM05D004270 ORTHO05D005037 1.6e-147 526.2 291 86.3
Hma1.2p1_0151F.1_g067120 Hydrangea macrophylla HOM05D004270 ORTHO05D005037 1.6e-147 526.2 291 86.9
CAN.G84.19 Capsicum annuum HOM05D004270 ORTHO05D005037 2.1e-147 525.8 291 86.9
CARHR016810 Cardamine hirsuta HOM05D004270 ORTHO05D005037 2.8e-147 525.4 288 88.2
AT1G16340 Arabidopsis thaliana HOM05D004270 ORTHO05D005037 3.6e-147 525.0 288 88.2
PSO782G4107 Papaver somniferum HOM05D004270 ORTHO05D005037 4.7e-147 524.6 290 87.2
SGA_v2.0_scaffold49G18204 Striga asiatica HOM05D004270 ORTHO05D005037 4.7e-147 524.6 296 86.5
EL10Ac2g04029 Beta vulgaris HOM05D004270 ORTHO05D005037 8.1e-147 523.9 291 86.6
PSO732G0600 Papaver somniferum HOM05D004270 ORTHO05D005037 1.8e-146 522.7 290 87.2
Os12g0210800 Oryza sativa ssp. japonica HOM05D004270 ORTHO05D005037 2.4e-146 522.3 292 87.0
Lsat_1_v5_gn_2_88340 Lactuca sativa HOM05D004270 ORTHO05D005037 3.1e-146 521.9 291 84.9
AL1G28460 Arabidopsis lyrata HOM05D004270 ORTHO05D005037 6.9e-146 520.8 288 87.2
THA.LOC104813606 Tarenaya hassleriana HOM05D004270 ORTHO05D005037 9.0e-146 520.4 287 87.5
ECA238G3087 Erigeron canadensis HOM05D004270 ORTHO05D005037 1.2e-145 520.0 292 86.0
PGR119G1968 Punica granatum HOM05D004270 ORTHO05D005037 2.0e-145 519.2 285 86.3
Lalb_Chr19g0126381 Lupinus albus HOM05D004270 ORTHO05D005037 2.6e-145 518.8 272 93.8
BraA02t07287Z Brassica rapa HOM05D004270 ORTHO05D005037 3.4e-145 518.5 292 86.6
PGSC0003DMG400025362 Solanum tuberosum HOM05D004270 ORTHO05D005037 3.4e-145 518.5 288 86.5
COL.COLO4_12345 Corchorus olitorius HOM05D004270 ORTHO05D005037 4.4e-145 518.1 273 91.9
MSTRG.16093 Avicennia marina HOM05D004270 ORTHO05D005037 7.6e-145 517.3 288 85.4
Solyc11g072690.2 Solanum lycopersicum HOM05D004270 ORTHO05D005037 7.6e-145 517.3 288 86.1
Sopen11g030360 Solanum pennellii HOM05D004270 ORTHO05D005037 7.6e-145 517.3 288 86.1
Ah.15g099350 Amaranthus hybridus HOM05D004270 ORTHO05D005037 9.9e-145 516.9 288 85.8
Ah.15g099360 Amaranthus hybridus HOM05D004270 ORTHO05D005037 9.9e-145 516.9 288 85.8
Carub.0001s1608 Capsella rubella HOM05D004270 ORTHO05D005037 1.7e-144 516.2 290 87.2
C02p36680 Brassica napus HOM05D004270 ORTHO05D005037 2.2e-144 515.8 292 86.0
A02p22860 Brassica napus HOM05D004270 ORTHO05D005037 3.8e-144 515.0 295 85.4
Haze_02880 Corylus avellana HOM05D004270 ORTHO05D005037 4.9e-144 514.6 272 89.7
MSTRG.13089 Avicennia marina HOM05D004270 ORTHO05D005037 8.4e-144 513.8 291 84.9
HPP92_024995 Vanilla planifolia HOM05D004270 ORTHO05D005037 8.4e-144 513.8 291 84.5
Cc11_g02350 Coffea canephora HOM05D004270 ORTHO05D005037 1.9e-143 512.7 291 83.8
BolC6t38147H Brassica oleracea HOM05D004270 ORTHO05D005037 3.2e-143 511.9 291 86.3
vmacro23274 Vaccinium macrocarpon HOM05D004270 ORTHO05D005037 3.2e-143 511.9 318 79.2
BraA07t30356Z Brassica rapa HOM05D004270 ORTHO05D005037 7.1e-143 510.8 291 85.9
A07p27110 Brassica napus HOM05D004270 ORTHO05D005037 9.3e-143 510.4 291 85.6
Glyma.18G248300 Glycine max HOM05D004270 ORTHO05D005037 2.1e-142 509.2 273 90.8
SGA_v2.0_scaffold239G44014 Striga asiatica HOM05D004270 ORTHO05D005037 2.7e-142 508.8 275 88.4
QL04p092971 Quercus lobata HOM05D004270 ORTHO05D005037 7.8e-142 507.3 272 89.7
MD05G1236400 Malus domestica HOM05D004270 ORTHO05D005037 1.0e-141 506.9 291 84.2
BolC2t09663H Brassica oleracea HOM05D004270 ORTHO05D005037 1.3e-141 506.5 296 84.5
QL04p091607 Quercus lobata HOM05D004270 ORTHO05D005037 6.6e-141 504.2 272 89.3
BcaC08g45353 Brassica carinata HOM05D004270 ORTHO05D005037 1.1e-140 503.4 272 89.7
FAN16G1654 Fragaria x ananassa HOM05D004270 ORTHO05D005037 1.9e-140 502.7 272 89.3
FAN11G3302 Fragaria x ananassa HOM05D004270 ORTHO05D005037 5.6e-140 501.1 288 85.1
MBI07_g44658_MAGBIO Magnolia biondii HOM05D004270 ORTHO05D005037 2.8e-139 498.8 290 84.5
Zm00001eb138330 Zea mays HOM05D004270 ORTHO05D005037 8.1e-139 497.3 289 83.7
Lj7A89G46 Lonicera japonica HOM05D004270 ORTHO05D005037 2.0e-137 492.7 279 86.7
vmacro11688 Vaccinium macrocarpon HOM05D004270 ORTHO05D005037 7.6e-137 490.7 362 69.6
BcaB05g25203 Brassica carinata HOM05D004270 ORTHO05D005037 9.9e-137 490.3 293 84.0
PGR119G0090 Punica granatum HOM05D004270 ORTHO05D005037 2.2e-136 489.2 285 82.8
Ah.15g099340 Amaranthus hybridus HOM05D004270 ORTHO05D005037 6.4e-136 487.6 273 85.3
unitig_744.g24505 Utricularia gibba HOM05D004270 ORTHO05D005037 8.4e-136 487.3 269 86.6
C06p29850 Brassica napus HOM05D004270 ORTHO05D005037 5.4e-135 484.6 272 87.9
Rhsim06G0243500 Rhododendron simsii HOM05D004270 ORTHO05D005037 7.1e-135 484.2 300 80.0
Aa31LG4G1520 Aethionema arabicum HOM05D004270 ORTHO05D005037 9.3e-135 483.8 266 89.1
BcaC08g45351 Brassica carinata HOM05D004270 ORTHO05D005037 1.6e-134 483.0 292 81.5
SalBow8G2534 Salvia bowleyana HOM05D004270 ORTHO05D005037 3.5e-134 481.9 295 81.7
SalBow8G3927 Salvia bowleyana HOM05D004270 ORTHO05D005037 3.5e-134 481.9 295 81.7
Lj7A89G45 Lonicera japonica HOM05D004270 ORTHO05D005037 1.3e-133 479.9 266 88.3
Rhsim03G0145800 Rhododendron simsii HOM05D004270 ORTHO05D005037 1.1e-132 476.9 311 76.8
CSS0009623 Camellia sinensis var. sinensis HOM05D004270 ORTHO05D005037 1.9e-132 476.1 259 88.0
Duzib187G1262 Durio zibethinus HOM05D004270 ORTHO05D005037 1.9e-132 476.1 255 90.2
ATR0743G256 Amborella trichopoda HOM05D004270 ORTHO05D005037 2.4e-130 469.2 253 88.9
ATR0561G061 Amborella trichopoda HOM05D004270 ORTHO05D005037 2.0e-129 466.1 253 88.1
Nitab4.5_0004015g0030 Nicotiana tabacum HOM05D004270 ORTHO05D005037 2.2e-128 462.6 291 78.4
Pp3c22_7420 Physcomitrium patens HOM05D004270 ORTHO05D005037 7.1e-127 457.6 283 76.3
Peaxi162Scf00616g00418 Petunia axillaris HOM05D004270 ORTHO05D005037 3.5e-126 455.3 288 78.5
FAN21G0266 Fragaria x ananassa HOM05D004270 ORTHO05D005037 1.3e-125 453.4 254 86.6
SMO347G0325 Selaginella moellendorffii HOM05D004270 ORTHO05D005037 1.3e-125 453.4 271 78.6
Hma1.2p1_2351F.1_g320490 Hydrangea macrophylla HOM05D004270 ORTHO05D005037 2.3e-125 452.6 301 76.4
Eucgr.K01360 Eucalyptus grandis HOM05D004270 ORTHO05D005037 1.9e-124 449.5 247 87.0
DCAR_013716 Daucus carota HOM05D004270 ORTHO05D005037 7.4e-124 447.6 238 89.5
AagrBONN_evm.TU.Sc2ySwM_344.2891 Anthoceros agrestis HOM05D004270 ORTHO05D005037 1.6e-123 446.4 287 72.5
Oeu026000.2 Olea europaea HOM05D004270 ORTHO05D005037 2.1e-123 446.0 324 69.8
Lj4A247G30 Lonicera japonica HOM05D004270 ORTHO05D005037 3.4e-121 438.7 242 88.0
PSO832G2042 Papaver somniferum HOM05D004270 ORTHO05D005037 4.9e-120 434.9 290 76.2
RcHm_v2.0_Chr6g0274781 Rosa chinensis HOM05D004270 ORTHO05D005037 4.5e-113 411.8 275 76.7
Mapoly0024s0056 Marchantia polymorpha HOM05D004270 ORTHO05D005037 1.7e-112 409.8 290 68.3
CiPaw.13G024200 Carya illinoinensis HOM05D004270 ORTHO05D005037 8.5e-112 407.5 220 88.6
vmacro08704 Vaccinium macrocarpon HOM05D004270 ORTHO05D005037 8.5e-112 407.5 390 58.5
arahy.Tifrunner.gnm1.ann1.S8QNVY Arachis hypogaea HOM05D004270 ORTHO05D005037 2.6e-100 369.4 275 69.8
CDE05G0560 Ceratophyllum demersum HOM05D004270 ORTHO05D005037 2.2e-99 366.3 191 88.0
QL04p093439 Quercus lobata HOM05D004270 ORTHO05D005037 1.4e-98 363.6 400 52.5
Nitab4.5_0006659g0030 Nicotiana tabacum HOM05D004270 ORTHO05D005037 8.5e-96 354.4 198 86.4
arahy.Tifrunner.gnm1.ann1.IC77ZE Arachis hypogaea HOM05D004270 ORTHO05D005037 8.8e-93 344.4 271 67.5
Cpa.g.sc32.74 Carica papaya HOM05D004270 ORTHO05D005037 1.5e-92 343.6 173 94.2
SHI21470 Sapria himalayana HOM05D004270 ORTHO05D005037 9.7e-84 314.3 278 60.1
Cfa020378 Carpinus fangiana HOM05D004270 ORTHO05D005037 1.5e-79 300.4 234 67.1
CBR_g41577 Chara braunii HOM05D000019 ORTHO05D000048 8.8e-77 291.2 172 79.1
arahy.Tifrunner.gnm1.ann1.06J840 Arachis hypogaea HOM05D004270 ORTHO05D005037 4.7e-70 268.9 194 71.6
Haze_26612 Corylus avellana HOM05D004270 ORTHO05D005037 3.0e-69 266.2 261 50.2
arahy.Tifrunner.gnm1.ann1.IZH1PK Arachis hypogaea HOM05D004270 ORTHO05D005037 1.9e-55 220.3 193 63.7
arahy.Tifrunner.gnm1.ann1.BQF4LJ Arachis hypogaea HOM05D004270 ORTHO05D005037 1.7e-51 207.2 131 78.6
arahy.Tifrunner.gnm1.ann1.C4QR2M Arachis hypogaea HOM05D004270 ORTHO05D005037 1.7e-51 207.2 131 78.6
QL04p092150 Quercus lobata HOM05D004270 ORTHO05D005037 2.4e-37 160.2 141 62.4
MBI10_g05703_MAGBIO Magnolia biondii HOM05D004270 ORTHO05D005037 1.1e-31 141.4 129 62.0
Lsat_1_v5_gn_3_92901 Lactuca sativa HOM05D004270 ORTHO05D005037 1.5e-23 114.4 72 69.4
SEGI_39104 Sequoiadendron giganteum HOM05D004270 ORTHO05D005037 1.9e-23 114.0 91 61.5
vmacro07967 Vaccinium macrocarpon HOM05D004270 ORTHO05D007590 7.3e-23 112.1 66 75.8
arahy.Tifrunner.gnm1.ann1.J4JBIL Arachis hypogaea HOM05D004270 ORTHO05D005037 4.8e-22 109.4 88 64.8
arahy.Tifrunner.gnm1.ann1.SB2A23 Arachis hypogaea HOM05D004270 ORTHO05D005037 4.8e-22 109.4 88 64.8
Lsat_1_v5_gn_2_10621 Lactuca sativa HOM05D004270 ORTHO05D005037 5.3e-21 105.9 64 78.1
arahy.Tifrunner.gnm1.ann1.8HXD5I Arachis hypogaea HOM05D004270 ORTHO05D005037 1.0e-16 91.7 237 31.2
SEGI_07848 Sequoiadendron giganteum HOM05D004270 ORTHO05D005037 3.9e-16 89.7 51 76.5
RcHm_v2.0_Chr2g0110821 Rosa chinensis HOM05D004270 ORTHO05D005037 1.8e-13 80.9 45 82.2
FAN12G0414 Fragaria x ananassa HOM05D000835 ORTHO05D035555 2.9e-11 73.6 90 52.2
FAN12G0605 Fragaria x ananassa HOM05D000835 ORTHO05D035555 2.9e-11 73.6 90 52.2
arahy.Tifrunner.gnm1.ann1.FF7QMU Arachis hypogaea HOM05D004270 ORTHO05D005037 4.6e-09 66.2 46 65.2
TAR636G1752 Trochodendron aralioides HOM05D004270 ORTHO05D005037 7.9e-09 65.5 39 84.6


User provided reference genes

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