Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_07883_v3 Cicer arietinum L. HOM05D005942 ORTHO05D007209 0.0e+00 1366.3 731 100.0
TPR.G28866 Trifolium pratense HOM05D005942 ORTHO05D007209 0.0e+00 1087.8 757 77.1
Medtr7g117545 Medicago truncatula HOM05D005942 ORTHO05D007209 1.8e-304 1048.9 694 80.5
Psat6g168240 Pisum sativum HOM05D005942 ORTHO05D007209 1.2e-292 1009.6 753 73.7
Lj1g0014309 Lotus japonicus HOM05D005942 ORTHO05D007209 1.8e-280 969.1 761 69.1
VMungo1309G0067 Vigna mungo HOM05D005942 ORTHO05D007209 2.7e-276 955.3 757 68.4
Glyma.03G263200 Glycine max HOM05D005942 ORTHO05D007209 3.3e-274 948.3 753 68.5
Phvul.009G261600 Phaseolus vulgaris HOM05D005942 ORTHO05D007209 1.4e-267 926.4 713 69.4
Lalb_Chr15g0076691 Lupinus albus HOM05D005942 ORTHO05D007209 5.7e-266 921.0 784 69.0
arahy.Tifrunner.gnm1.ann1.SXV5N5 Arachis hypogaea HOM05D005942 ORTHO05D007209 8.6e-238 827.4 653 68.6
CiPaw.02G130800 Carya illinoinensis HOM05D005942 ORTHO05D007209 7.8e-215 751.1 724 55.2
QL05p001132 Quercus lobata HOM05D005942 ORTHO05D007209 9.6e-213 744.2 728 54.9
QL05p000862 Quercus lobata HOM05D005942 ORTHO05D007209 2.8e-212 742.7 728 54.8
Prupe.3G030900 Prunus persica HOM05D005942 ORTHO05D007209 6.0e-207 724.9 754 52.3
Hma1.2p1_0090F.1_g045800 Hydrangea macrophylla HOM05D005942 ORTHO05D007209 1.9e-205 719.9 715 54.1
Dinv20380 Davidia involucrata HOM05D005942 ORTHO05D007209 3.3e-205 719.2 633 58.8
Dinv37817 Davidia involucrata HOM05D005942 ORTHO05D007209 4.3e-205 718.8 623 58.6
Potri.003G073000 Populus trichocarpa HOM05D005942 ORTHO05D007209 9.9e-202 707.6 706 52.7
TWI14G0802 Tripterygium wilfordii HOM05D005942 ORTHO05D007209 2.4e-200 703.0 774 50.8
CsaV3_7G033920 Cucumis sativus L. HOM05D005942 ORTHO05D007209 3.2e-200 702.6 730 51.9
Thecc.06G130500 Theobroma cacao HOM05D005942 ORTHO05D007209 7.1e-200 701.4 671 54.5
TAR624G0006 Trochodendron aralioides HOM05D005942 ORTHO05D007209 9.3e-200 701.0 616 58.0
GSVIVG01016664001 Vitis vinifera HOM05D005942 ORTHO05D007209 2.3e-198 696.4 639 56.7
Ciclev10024928m.g Citrus clementina HOM05D005942 ORTHO05D007209 8.7e-198 694.5 633 55.9
ClCG09G001410 Citrullus lanatus HOM05D005942 ORTHO05D007209 1.1e-197 694.1 729 51.6
CSS0026354 Camellia sinensis var. sinensis HOM05D005942 ORTHO05D007209 1.5e-197 693.7 727 53.5
Cc04_g00670 Coffea canephora HOM05D005942 ORTHO05D007209 4.3e-197 692.2 678 53.4
RcHm_v2.0_Chr2g0147901 Rosa chinensis HOM05D005942 ORTHO05D007209 1.4e-195 687.2 642 55.3
Sabra03G0043700 Salix brachista HOM05D005942 ORTHO05D007209 2.4e-195 686.4 736 50.3
CANSAT56G3801 Cannabis sativa HOM05D005942 ORTHO05D007209 5.3e-195 685.3 661 54.0
PGR102G3180 Punica granatum HOM05D005942 ORTHO05D007209 1.5e-194 683.7 637 55.7
Haze_16138 Corylus avellana HOM05D005942 ORTHO05D007209 5.8e-194 681.8 877 46.5
Gohir.D05G144100 Gossypium hirsutum HOM05D005942 ORTHO05D007209 2.2e-193 679.9 694 52.2
Gorai.009G148000 Gossypium raimondii HOM05D005942 ORTHO05D007209 2.2e-193 679.9 694 52.2
FAN09G3780 Fragaria x ananassa HOM05D005942 ORTHO05D007209 6.5e-193 678.3 708 52.0
COL.COLO4_30871 Corchorus olitorius HOM05D005942 ORTHO05D007209 1.1e-192 677.6 648 54.5
Lj9C538T8 Lonicera japonica HOM05D005942 ORTHO05D007209 1.1e-192 677.6 704 51.3
Nn3g21985 Nelumbo nucifera HOM05D005942 ORTHO05D007209 1.4e-192 677.2 633 55.6
Sed0028190 Sechium edule HOM05D005942 ORTHO05D007209 2.5e-192 676.4 642 55.8
MELO3C024305.2 Cucumis melo HOM05D005942 ORTHO05D007209 4.2e-192 675.6 764 49.7
FvH4_6g35860 Fragaria vesca HOM05D005942 ORTHO05D007209 4.2e-192 675.6 711 51.5
Gohir.A05G141800 Gossypium hirsutum HOM05D005942 ORTHO05D007209 7.1e-192 674.9 694 52.3
Eucgr.J02595 Eucalyptus grandis HOM05D005942 ORTHO05D007209 1.3e-190 670.6 629 54.4
FAN14G4637 Fragaria x ananassa HOM05D005942 ORTHO05D007209 3.0e-190 669.5 708 51.0
Duzib192G0321 Durio zibethinus HOM05D005942 ORTHO05D007209 1.5e-189 667.2 695 52.2
Rhsim08G0245000 Rhododendron simsii HOM05D005942 ORTHO05D007209 9.6e-189 664.5 734 51.6
FAN02G3526 Fragaria x ananassa HOM05D005942 ORTHO05D007209 1.4e-187 660.6 741 49.0
ECA234G0243 Erigeron canadensis HOM05D005942 ORTHO05D007209 5.9e-186 655.2 675 51.4
MBI13_g01657_MAGBIO Magnolia biondii HOM05D005942 ORTHO05D007209 7.2e-184 648.3 607 53.9
Lsat_1_v5_gn_5_137681 Lactuca sativa HOM05D005942 ORTHO05D007209 3.6e-183 646.0 677 51.3
CAN.G790.55 Capsicum annuum HOM05D005942 ORTHO05D007209 7.9e-183 644.8 649 51.6
DCAR_007660 Daucus carota HOM05D005942 ORTHO05D007209 3.9e-182 642.5 656 50.6
Aqoxy7G00926 Aquilegia oxysepala HOM05D005942 ORTHO05D007209 8.7e-182 641.3 617 52.7
THA.LOC104813965 Tarenaya hassleriana HOM05D005942 ORTHO05D007209 1.5e-181 640.6 716 48.9
Aa31LG4G2680 Aethionema arabicum HOM05D005942 ORTHO05D007209 5.7e-181 638.6 693 50.1
MSTRG.10908 Avicennia marina HOM05D005942 ORTHO05D007209 7.4e-181 638.3 724 48.9
MD09G1172500 Malus domestica HOM05D005942 ORTHO05D007209 1.6e-180 637.1 685 50.1
AL2G32000 Arabidopsis lyrata HOM05D005942 ORTHO05D007209 2.2e-180 636.7 724 49.0
Carub.0002s1918 Capsella rubella HOM05D005942 ORTHO05D007209 2.2e-180 636.7 698 49.7
Thhalv10018182m.g Eutrema salsugineum HOM05D005942 ORTHO05D007209 2.2e-180 636.7 724 48.3
Atru.chr1.4156 Acer truncatum HOM05D005942 ORTHO05D007209 3.7e-180 636.0 634 53.3
PSO017G1617 Papaver somniferum HOM05D005942 ORTHO05D007209 3.7e-180 636.0 623 53.6
Sopen03g041410 Solanum pennellii HOM05D005942 ORTHO05D007209 6.3e-180 635.2 632 52.5
PSO170G5566 Papaver somniferum HOM05D005942 ORTHO05D007209 8.2e-180 634.8 621 53.5
AT1G72320 Arabidopsis thaliana HOM05D005942 ORTHO05D007209 1.4e-179 634.0 725 48.8
PGSC0003DMG400009149 Solanum tuberosum HOM05D005942 ORTHO05D007209 1.8e-179 633.6 674 50.0
Solyc03g123640.3 Solanum lycopersicum HOM05D005942 ORTHO05D007209 4.1e-179 632.5 632 52.5
Peaxi162Scf00038g02336 Petunia axillaris HOM05D005942 ORTHO05D007209 9.0e-179 631.3 679 49.9
SalBow7G4809 Salvia bowleyana HOM05D005942 ORTHO05D007209 1.5e-178 630.6 686 49.9
CARHR065220 Cardamine hirsuta HOM05D005942 ORTHO05D007209 5.9e-178 628.6 726 48.8
Nitab4.5_0006338g0060 Nicotiana tabacum HOM05D005942 ORTHO05D007209 4.2e-176 622.5 674 49.3
SGA_v2.0_scaffold122G33306 Striga asiatica HOM05D005942 ORTHO05D007209 9.4e-176 621.3 686 49.0
EL10Ac7g16496 Beta vulgaris HOM05D005942 ORTHO05D007209 1.6e-175 620.5 645 51.9
Sp5g27400 Schrenkiella parvula HOM05D005942 ORTHO05D007209 2.7e-175 619.8 702 48.6
AUR62001402 Chenopodium quinoa HOM05D005942 ORTHO05D007209 7.4e-173 611.7 704 48.2
AUR62025613 Chenopodium quinoa HOM05D005942 ORTHO05D007209 4.8e-172 609.0 704 48.0
BcaC08g46688 Brassica carinata HOM05D005942 ORTHO05D007209 8.2e-172 608.2 700 47.1
BolC6t39713H Brassica oleracea HOM05D005942 ORTHO05D007209 1.4e-171 607.4 701 46.9
C06p46680 Brassica napus HOM05D005942 ORTHO05D007209 1.8e-171 607.1 701 46.9
Migut.I01134 Erythranthe guttata HOM05D005942 ORTHO05D007209 2.4e-171 606.7 628 49.8
Ah.15g094920 Amaranthus hybridus HOM05D005942 ORTHO05D007209 3.1e-171 606.3 655 49.8
A07p38500 Brassica napus HOM05D005942 ORTHO05D007209 1.5e-170 604.0 659 49.0
Cfa003459 Carpinus fangiana HOM05D005942 ORTHO05D007209 1.3e-169 600.9 1079 37.6
BraA07t31410Z Brassica rapa HOM05D005942 ORTHO05D007209 2.9e-169 599.7 695 47.1
Manes.04G151100 Manihot esculenta HOM05D005942 ORTHO05D007209 8.5e-169 598.2 649 50.4
Hund18636 Selenicereus undatus HOM05D005942 ORTHO05D007209 1.9e-168 597.0 705 47.4
BcaB03g14980 Brassica carinata HOM05D005942 ORTHO05D007209 1.2e-167 594.3 646 49.1
vmacro18719 Vaccinium macrocarpon HOM05D005942 ORTHO05D007209 4.4e-165 585.9 682 49.4
HanXRQChr10g0311801 Helianthus annuus HOM05D005942 ORTHO05D007209 2.8e-164 583.2 676 47.0
CDE04G3550 Ceratophyllum demersum HOM05D005942 ORTHO05D007209 2.4e-163 580.1 689 46.3
Oeu019509.2 Olea europaea HOM05D005942 ORTHO05D007209 8.0e-159 565.1 586 52.0
ATR0099G013 Amborella trichopoda HOM05D005942 ORTHO05D007209 2.2e-156 557.0 642 47.4
FAN05G1996 Fragaria x ananassa HOM05D005942 ORTHO05D007209 5.3e-155 552.4 589 50.6
HPP92_016652 Vanilla planifolia HOM05D005942 ORTHO05D007209 1.1e-144 518.1 582 45.7
Sc12g0011030 Simmondsia chinensis HOM05D005942 ORTHO05D007209 9.5e-144 515.0 597 47.6
Nitab4.5_0001873g0040 Nicotiana tabacum HOM05D005942 ORTHO05D007209 2.7e-143 513.5 670 44.2
Zm00001eb028000 Zea mays HOM05D005942 ORTHO05D007209 4.5e-138 496.1 670 40.1
arahy.Tifrunner.gnm1.ann1.UMP4HF Arachis hypogaea HOM05D005942 ORTHO05D007209 2.5e-136 490.3 410 64.6
AUR62043501 Chenopodium quinoa HOM05D005942 ORTHO05D007209 1.3e-129 468.0 483 51.3
Nitab4.5_0007678g0030 Nicotiana tabacum HOM05D005942 ORTHO05D007209 1.5e-117 427.9 674 38.9
Actinidia24424 Actinidia chinensis HOM05D005942 ORTHO05D007209 6.0e-114 416.0 365 59.2
unitig_62.g23675 Utricularia gibba HOM05D005942 ORTHO05D007209 6.9e-102 375.9 624 37.7
Cpa.g.sc25.196 Carica papaya HOM05D005942 ORTHO05D007209 6.4e-92 342.8 302 57.0
Mapoly0020s0016 Marchantia polymorpha HOM05D005942 ORTHO05D007209 1.4e-91 341.7 579 37.7
Pp3c10_6430 Physcomitrium patens HOM05D005942 ORTHO05D007209 5.4e-91 339.7 617 34.8
AagrBONN_evm.TU.Sc2ySwM_369.233 Anthoceros agrestis HOM05D005942 ORTHO05D007209 1.2e-90 338.6 595 35.6
SMO118G0133 Selaginella moellendorffii HOM05D005942 ORTHO05D007209 1.6e-74 285.0 572 31.5
HPP92_016646 Vanilla planifolia HOM05D005942 ORTHO05D007209 1.3e-68 265.4 325 44.3
CAN.G635.25 Capsicum annuum HOM05D005942 ORTHO05D007209 3.8e-68 263.8 671 31.0
Nitab4.5_0001873g0030 Nicotiana tabacum HOM05D005942 ORTHO05D007209 4.3e-64 250.4 664 30.7
Cpa.g.sc25.195 Carica papaya HOM05D005942 ORTHO05D007209 2.1e-58 231.5 224 55.4
HPP92_016647 Vanilla planifolia HOM05D005942 ORTHO05D007209 2.9e-52 211.1 261 42.9
MCO05G275 Micromonas commoda HOM05D005942 ORTHO05D007209 1.6e-50 205.3 592 28.4
Cre16.g649600 Chlamydomonas reinhardtii HOM05D005942 ORTHO05D007209 5.9e-45 186.8 641 25.7
CBR_g4864 Chara braunii HOM05D005942 ORTHO05D007209 3.1e-38 164.5 715 23.5
Sabra01G0130200 Salix brachista HOM05D005942 ORTHO05D007209 1.5e-35 155.6 638 26.2
Glyma.19G262250 Glycine max HOM05D005942 ORTHO05D007209 3.2e-35 154.5 175 57.1
CAN.G635.26 Capsicum annuum HOM05D005942 ORTHO05D007209 2.6e-32 144.8 160 49.4
SEGI_33476 Sequoiadendron giganteum HOM05D005942 ORTHO05D007209 7.2e-27 126.7 184 39.1
Psat3g111360 Pisum sativum HOM05D001026 ORTHO05D005232 5.8e-16 90.5 49 77.6
C02p29840 Brassica napus HOM05D005942 ORTHO05D007209 7.5e-16 90.1 73 58.9
Haze_02542 Corylus avellana HOM05D005942 ORTHO05D007209 2.9e-15 88.2 83 59.0
SEGI_14143 Sequoiadendron giganteum HOM05D005942 ORTHO05D007209 4.9e-15 87.4 135 40.7
Actinidia21840 Actinidia chinensis HOM05D005942 ORTHO05D007209 6.4e-15 87.0 120 40.8
Actinidia21839 Actinidia chinensis HOM05D005942 ORTHO05D007209 3.2e-14 84.7 65 60.0
BolC2t09032H Brassica oleracea HOM05D005942 ORTHO05D007209 1.2e-13 82.8 92 46.7
SGA_v2.0_scaffold253G45152 Striga asiatica HOM05D005942 ORTHO05D007209 4.6e-13 80.9 154 37.7
MBI15_g00935_MAGBIO Magnolia biondii HOM05D001716 ORTHO05D016670 3.6e-10 71.2 176 29.0
CBR_g19531 Chara braunii HOM05D005942 ORTHO05D007209 2.3e-09 68.6 649 21.1
SEGI_28404 Sequoiadendron giganteum HOM05D005942 ORTHO05D007209 7.5e-08 63.5 59 45.8


User provided reference genes

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