Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_03532_v3 Cicer arietinum L. HOM05D006561 ORTHO05D008097 7.1e-136 487.3 246 100.0
Psat0s1402g0080 Pisum sativum HOM05D006561 ORTHO05D008097 1.6e-119 433.0 246 86.6
TPR.G7947 Trifolium pratense HOM05D006561 ORTHO05D008097 1.7e-113 412.9 246 82.5
Medtr2g078640 Medicago truncatula HOM05D006561 ORTHO05D008097 9.3e-112 407.1 246 82.1
VMungo1080G0633 Vigna mungo HOM05D006561 ORTHO05D008097 1.5e-98 363.2 247 73.7
Phvul.005G029100 Phaseolus vulgaris HOM05D006561 ORTHO05D008097 5.0e-97 358.2 248 73.4
Lalb_Chr25g0286221 Lupinus albus HOM05D006561 ORTHO05D008097 4.7e-95 351.7 248 70.6
Glyma.13G273500 Glycine max HOM05D006561 ORTHO05D008097 3.5e-90 335.5 251 68.9
Phvul.005G075200 Phaseolus vulgaris HOM05D006561 ORTHO05D008097 4.1e-83 312.0 209 74.2
Lj3g0026269 Lotus japonicus HOM05D006561 ORTHO05D008097 1.2e-82 310.5 203 76.4
Rhsim06G0203200 Rhododendron simsii HOM05D006561 ORTHO05D008097 1.7e-76 290.0 251 57.8
arahy.Tifrunner.gnm1.ann1.RM2LTG Arachis hypogaea HOM05D006561 ORTHO05D008097 2.2e-76 289.7 247 63.2
TAR627G0129 Trochodendron aralioides HOM05D006561 ORTHO05D008097 2.4e-75 286.2 255 59.2
Oeu005397.1 Olea europaea HOM05D006561 ORTHO05D008097 4.1e-75 285.4 251 58.6
ClCG11G017750 Citrullus lanatus HOM05D006561 ORTHO05D008097 3.8e-73 278.9 249 56.2
Dinv14944 Davidia involucrata HOM05D006561 ORTHO05D008097 6.5e-73 278.1 251 57.4
TWI38G0530 Tripterygium wilfordii HOM05D006561 ORTHO05D008097 1.1e-72 277.3 251 56.2
CSS0025681 Camellia sinensis var. sinensis HOM05D006561 ORTHO05D008097 5.5e-72 275.0 252 57.5
CSS0029173 Camellia sinensis var. sinensis HOM05D006561 ORTHO05D008097 5.5e-72 275.0 252 57.5
Migut.M00775 Erythranthe guttata HOM05D006561 ORTHO05D008097 2.7e-71 272.7 248 57.3
Hma1.2p1_0416F.1_g148410 Hydrangea macrophylla HOM05D006561 ORTHO05D008097 2.7e-71 272.7 241 54.8
CiPaw.11G166900 Carya illinoinensis HOM05D006561 ORTHO05D008097 4.7e-71 271.9 251 55.4
Aqoxy1G02303 Aquilegia oxysepala HOM05D006561 ORTHO05D008097 1.0e-70 270.8 238 57.1
Manes.03G104900 Manihot esculenta HOM05D006561 ORTHO05D008097 1.0e-70 270.8 251 55.4
PGSC0003DMG401012439 Solanum tuberosum HOM05D006561 ORTHO05D008097 1.4e-70 270.4 251 55.8
Eucgr.F01175 Eucalyptus grandis HOM05D006561 ORTHO05D008097 2.3e-70 269.6 248 54.8
Nn1g06395 Nelumbo nucifera HOM05D006561 ORTHO05D008097 2.3e-70 269.6 251 57.0
Cfa020616 Carpinus fangiana HOM05D006561 ORTHO05D008097 1.2e-69 267.3 251 53.8
Nitab4.5_0000246g0010 Nicotiana tabacum HOM05D006561 ORTHO05D008097 1.5e-69 266.9 251 54.6
Sed0026268 Sechium edule HOM05D006561 ORTHO05D008097 1.5e-69 266.9 249 54.2
Nitab4.5_0002019g0020 Nicotiana tabacum HOM05D006561 ORTHO05D008097 2.0e-69 266.5 251 54.6
Sopen07g031000 Solanum pennellii HOM05D006561 ORTHO05D008097 7.5e-69 264.6 252 54.8
PGR083G2053 Punica granatum HOM05D006561 ORTHO05D008097 9.8e-69 264.2 249 52.6
CsaV3_4G033370 Cucumis sativus L. HOM05D006561 ORTHO05D008097 1.3e-68 263.8 249 53.4
Solyc07g062780.3 Solanum lycopersicum HOM05D006561 ORTHO05D008097 1.7e-68 263.5 252 54.4
MELO3C025617.2 Cucumis melo HOM05D006561 ORTHO05D008097 2.8e-68 262.7 257 52.5
Haze_09389 Corylus avellana HOM05D006561 ORTHO05D008097 3.7e-68 262.3 251 52.6
PSO675G8981 Papaver somniferum HOM05D006561 ORTHO05D008097 4.9e-68 261.9 251 53.4
MSTRG.15242 Avicennia marina HOM05D006561 ORTHO05D008097 2.4e-67 259.6 251 54.6
Atru.chr2.2390 Acer truncatum HOM05D006561 ORTHO05D008097 1.2e-66 257.3 251 52.6
Potri.011G141200 Populus trichocarpa HOM05D006561 ORTHO05D008097 2.7e-66 256.1 255 53.3
Ciclev10009269m.g Citrus clementina HOM05D006561 ORTHO05D008097 4.5e-66 255.4 252 54.4
AUR62019482 Chenopodium quinoa HOM05D006561 ORTHO05D008097 5.9e-66 255.0 252 52.4
GSVIVG01014276001 Vitis vinifera HOM05D006561 ORTHO05D008097 1.0e-65 254.2 211 58.8
Sabra11G0126800 Salix brachista HOM05D006561 ORTHO05D008097 3.8e-65 252.3 255 52.2
Cc05_g11670 Coffea canephora HOM05D006561 ORTHO05D008097 1.1e-64 250.8 239 52.3
C05p52080 Brassica napus HOM05D006561 ORTHO05D008097 1.5e-64 250.4 247 52.2
Gohir.D01G047500 Gossypium hirsutum HOM05D006561 ORTHO05D008097 1.5e-64 250.4 254 52.4
Gorai.002G067000 Gossypium raimondii HOM05D006561 ORTHO05D008097 1.5e-64 250.4 254 52.4
Thecc.07G098700 Theobroma cacao HOM05D006561 ORTHO05D008097 1.5e-64 250.4 268 48.9
MD03G1235300 Malus domestica HOM05D006561 ORTHO05D008097 1.9e-64 250.0 247 53.4
Prupe.4G174000 Prunus persica HOM05D006561 ORTHO05D008097 1.9e-64 250.0 215 57.7
BolC5t33893H Brassica oleracea HOM05D006561 ORTHO05D008097 2.5e-64 249.6 247 52.2
ATR0602G252 Amborella trichopoda HOM05D006561 ORTHO05D008097 3.3e-64 249.2 241 49.8
Lj8A153G39 Lonicera japonica HOM05D006561 ORTHO05D008097 3.3e-64 249.2 204 61.8
BcaB06g29539 Brassica carinata HOM05D006561 ORTHO05D008097 5.6e-64 248.4 247 51.8
Sc16g0007290 Simmondsia chinensis HOM05D006561 ORTHO05D008097 5.6e-64 248.4 254 48.8
EL10Ac4g08253 Beta vulgaris HOM05D006561 ORTHO05D008097 7.3e-64 248.1 253 51.8
AUR62036152 Chenopodium quinoa HOM05D006561 ORTHO05D008097 7.3e-64 248.1 252 50.4
Carub.0003s1480 Capsella rubella HOM05D006561 ORTHO05D008097 1.2e-63 247.3 241 53.1
A05p34300 Brassica napus HOM05D006561 ORTHO05D008097 1.6e-63 246.9 247 51.4
Gohir.A01G061000 Gossypium hirsutum HOM05D006561 ORTHO05D008097 1.6e-63 246.9 254 51.6
Aa31LG8G2350 Aethionema arabicum HOM05D006724 ORTHO05D008514 3.6e-63 245.7 237 53.6
AT3G15150 Arabidopsis thaliana HOM05D006561 ORTHO05D008097 6.1e-63 245.0 249 51.8
Thhalv10021394m.g Eutrema salsugineum HOM05D006561 ORTHO05D008097 6.1e-63 245.0 249 51.4
CAN.G162.30 Capsicum annuum HOM05D006561 ORTHO05D008097 8.0e-63 244.6 211 55.5
Peaxi162Scf00069g01837 Petunia axillaris HOM05D006561 ORTHO05D008097 1.0e-62 244.2 248 52.0
CARHR090130 Cardamine hirsuta HOM05D006561 ORTHO05D008097 1.4e-62 243.8 247 51.0
RcHm_v2.0_Chr5g0032331 Rosa chinensis HOM05D006561 ORTHO05D008097 2.3e-62 243.0 254 51.2
AL3G27540 Arabidopsis lyrata HOM05D006561 ORTHO05D008097 3.0e-62 242.7 249 52.2
unitig_747.g21579 Utricularia gibba HOM05D006561 ORTHO05D008097 5.2e-62 241.9 250 52.8
Sp3g13360 Schrenkiella parvula HOM05D006561 ORTHO05D008097 6.8e-62 241.5 248 50.8
BraA05t22251Z Brassica rapa HOM05D006561 ORTHO05D008097 2.0e-61 240.0 254 50.0
HanXRQChr10g0302511 Helianthus annuus HOM05D006561 ORTHO05D008097 2.0e-61 240.0 241 52.3
THA.LOC104818093 Tarenaya hassleriana HOM05D006561 ORTHO05D008097 2.0e-61 240.0 250 51.6
FvH4_3g19260 Fragaria vesca HOM05D006561 ORTHO05D008097 4.4e-61 238.8 255 49.8
ECA234G0004 Erigeron canadensis HOM05D006561 ORTHO05D008097 5.7e-61 238.4 244 52.9
FAN11G0360 Fragaria x ananassa HOM05D006561 ORTHO05D008097 5.7e-61 238.4 244 50.0
arahy.Tifrunner.gnm1.ann1.YD6KBQ Arachis hypogaea HOM05D006561 ORTHO05D008097 2.9e-60 236.1 246 54.9
MBI02_g25404_MAGBIO Magnolia biondii HOM05D006561 ORTHO05D008097 4.9e-60 235.3 247 51.0
FAN25G3572 Fragaria x ananassa HOM05D006561 ORTHO05D008097 6.4e-60 235.0 255 49.4
Hund17607 Selenicereus undatus HOM05D006561 ORTHO05D008097 8.3e-60 234.6 247 48.2
CANSAT35G0349 Cannabis sativa HOM05D006561 ORTHO05D008097 1.4e-59 233.8 251 49.4
vmacro11896 Vaccinium macrocarpon HOM05D006561 ORTHO05D008097 1.8e-59 233.4 321 41.1
DCAR_017121 Daucus carota HOM05D006561 ORTHO05D008097 2.4e-59 233.0 249 50.6
Lsat_1_v5_gn_5_127501 Lactuca sativa HOM05D006561 ORTHO05D008097 7.0e-59 231.5 252 50.0
SHI39306 Sapria himalayana HOM05D006561 ORTHO05D008097 9.2e-59 231.1 235 48.5
SHI39545 Sapria himalayana HOM05D006561 ORTHO05D008097 9.2e-59 231.1 235 48.5
Duzib213G1006 Durio zibethinus HOM05D006561 ORTHO05D008097 1.7e-57 226.9 214 51.9
Zm00001eb295840 Zea mays HOM05D006561 ORTHO05D008097 3.3e-56 222.6 237 47.3
Cpa.g.sc80.2 Carica papaya HOM05D006561 ORTHO05D008097 9.5e-56 221.1 246 48.0
MBI02_g44100_MAGBIO Magnolia biondii HOM05D006561 ORTHO05D008097 2.6e-53 213.0 216 50.5
HPP92_024567 Vanilla planifolia HOM05D006561 ORTHO05D008097 2.9e-52 209.5 300 41.7
SGA_v2.0_scaffold34G13795 Striga asiatica HOM05D006561 ORTHO05D008097 6.4e-52 208.4 206 51.0
MD11G1255800 Malus domestica HOM05D006561 ORTHO05D008097 3.2e-51 206.1 187 57.8
Pp3c22_18560 Physcomitrium patens HOM05D006561 ORTHO05D008097 5.4e-43 178.7 248 37.1
Ah.06g184730 Amaranthus hybridus HOM05D006561 ORTHO05D008097 9.2e-43 177.9 240 43.3
PSO541G4753 Papaver somniferum HOM05D006561 ORTHO05D008097 1.6e-42 177.2 182 52.2
Actinidia12544 Actinidia chinensis HOM05D006561 ORTHO05D008097 1.6e-39 167.2 182 50.0
Actinidia07498 Actinidia chinensis HOM05D006561 ORTHO05D008097 8.9e-38 161.4 117 64.1
QL08p023698 Quercus lobata HOM05D006561 ORTHO05D008097 6.4e-36 155.2 120 61.7
AagrBONN_evm.TU.Sc2ySwM_228.4556 Anthoceros agrestis HOM05D006561 ORTHO05D008097 2.4e-35 153.3 281 33.1
Mapoly0096s0048 Marchantia polymorpha HOM05D006561 ORTHO05D008097 2.1e-34 150.2 241 34.0
SMO143G0268 Selaginella moellendorffii HOM05D006561 ORTHO05D008097 2.3e-33 146.7 203 41.4
FAN16G3278 Fragaria x ananassa HOM05D006561 ORTHO05D008097 1.5e-32 144.1 129 54.3
SMO265G0056 Selaginella moellendorffii HOM05D006561 ORTHO05D008097 7.3e-32 141.7 175 44.0
CBR_g861 Chara braunii HOM05D006561 ORTHO05D008097 1.5e-29 134.0 223 30.9
arahy.Tifrunner.gnm1.ann1.YKS4T6 Arachis hypogaea HOM05D006561 ORTHO05D008097 2.2e-28 130.2 144 54.2
QL08p023707 Quercus lobata HOM05D006561 ORTHO05D008097 9.3e-27 124.8 127 48.8
CDE08G0579 Ceratophyllum demersum HOM05D006561 ORTHO05D008097 6.0e-26 122.1 147 43.5
Hma1.2p1_0416F.1_g148400 Hydrangea macrophylla HOM05D006561 ORTHO05D008097 1.3e-25 120.9 135 48.9
Haze_09400 Corylus avellana HOM05D006561 ORTHO05D008097 1.1e-24 117.9 131 48.9
PRCOL_00000682 Prasinoderma coloniale HOM05D006561 ORTHO05D008097 6.7e-17 92.0 207 30.9
Nn5g27383 Nelumbo nucifera HOM05D006561 ORTHO05D008097 5.6e-16 89.0 97 46.4
Mapoly0066s0041 Marchantia polymorpha HOM05D006561 ORTHO05D008097 2.2e-12 77.0 92 37.0
Pp3c23_10880 Physcomitrium patens HOM05D006561 ORTHO05D008097 1.1e-11 74.7 99 34.3
Pp3c20_12000 Physcomitrium patens HOM05D006561 ORTHO05D008097 1.9e-08 63.9 93 34.4
Os05g0563500 Oryza sativa ssp. japonica HOM05D006561 ORTHO05D008097 3.1e-06 56.6 80 38.8


User provided reference genes

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