Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_03420_v3 Cicer arietinum L. HOM05D002170 ORTHO05D148646 2.5e-62 241.9 118 100.0
Ca_22557_v3 Cicer arietinum L. HOM05D002170 ORTHO05D148971 8.9e-28 127.1 102 69.6
Ca_25357_v3 Cicer arietinum L. HOM05D002170 ORTHO05D007478 7.6e-11 70.9 40 77.5
PGR044G0130 Punica granatum HOM05D002170 ORTHO05D007478 7.6e-11 70.9 40 80.0
Rhsim08G0127800 Rhododendron simsii HOM05D002170 ORTHO05D007478 7.6e-11 70.9 40 80.0
vmacro17769 Vaccinium macrocarpon HOM05D002170 ORTHO05D007478 7.6e-11 70.9 40 80.0
Lalb_Chr22g0353421 Lupinus albus HOM05D002170 ORTHO05D007478 1.3e-10 70.1 40 77.5
Medtr6g071210 Medicago truncatula HOM05D002170 ORTHO05D007478 1.3e-10 70.1 40 77.5
Psat1g029560 Pisum sativum HOM05D002170 ORTHO05D007478 1.3e-10 70.1 40 77.5
THA.LOC104820334 Tarenaya hassleriana HOM05D002170 ORTHO05D007478 1.3e-10 70.1 40 77.5
TPR.G22320 Trifolium pratense HOM05D002170 ORTHO05D007478 1.3e-10 70.1 40 77.5
BcaB04g18965 Brassica carinata HOM05D002170 ORTHO05D007478 1.7e-10 69.7 40 77.5
BcaB04g20814 Brassica carinata HOM05D002170 ORTHO05D007478 1.7e-10 69.7 40 77.5
BcaC09g48741 Brassica carinata HOM05D002170 ORTHO05D007478 1.7e-10 69.7 40 77.5
BcaNung05883 Brassica carinata HOM05D002170 ORTHO05D007478 1.7e-10 69.7 40 77.5
A01p36570 Brassica napus HOM05D002170 ORTHO05D007478 1.7e-10 69.7 40 77.5
A05p32010 Brassica napus HOM05D002170 ORTHO05D007478 1.7e-10 69.7 40 77.5
C01p46400 Brassica napus HOM05D002170 ORTHO05D007478 1.7e-10 69.7 40 77.5
C05p48530 Brassica napus HOM05D002170 ORTHO05D007478 1.7e-10 69.7 40 77.5
BraA01t03721Z Brassica rapa HOM05D002170 ORTHO05D007478 1.7e-10 69.7 40 77.5
BraA05t22032Z Brassica rapa HOM05D002170 ORTHO05D007478 1.7e-10 69.7 40 77.5
CSS0009402 Camellia sinensis var. sinensis HOM05D002170 ORTHO05D007478 1.7e-10 69.7 40 77.5
CSS0042449 Camellia sinensis var. sinensis HOM05D002170 ORTHO05D007478 1.7e-10 69.7 40 77.5
Cfa020634 Carpinus fangiana HOM05D002170 ORTHO05D007478 1.7e-10 69.7 40 77.5
ClCG04G010450 Citrullus lanatus HOM05D002170 ORTHO05D007478 1.7e-10 69.7 40 75.0
COL.COLO4_18962 Corchorus olitorius HOM05D002170 ORTHO05D005003 1.7e-10 69.7 40 77.5
Haze_18913 Corylus avellana HOM05D002170 ORTHO05D007478 1.7e-10 69.7 40 77.5
MELO3C002149.2 Cucumis melo HOM05D002170 ORTHO05D007478 1.7e-10 69.7 40 75.0
CsaV3_1G007330 Cucumis sativus L. HOM05D002170 ORTHO05D007478 1.7e-10 69.7 40 75.0
Dinv05998 Davidia involucrata HOM05D002170 ORTHO05D007478 1.7e-10 69.7 40 77.5
Duzib068G1477 Durio zibethinus HOM05D002170 ORTHO05D007478 1.7e-10 69.7 40 77.5
Glyma.09G172700 Glycine max HOM05D002170 ORTHO05D007478 1.7e-10 69.7 40 75.0
MD06G1232500 Malus domestica HOM05D002170 ORTHO05D007478 1.7e-10 69.7 40 77.5
Manes.06G002900 Manihot esculenta HOM05D002170 ORTHO05D007478 1.7e-10 69.7 40 77.5
Phvul.004G148000 Phaseolus vulgaris HOM05D002170 ORTHO05D007478 1.7e-10 69.7 40 75.0
Potri.015G030600 Populus trichocarpa HOM05D002170 ORTHO05D007478 1.7e-10 69.7 40 77.5
QL10p031496 Quercus lobata HOM05D002170 ORTHO05D007478 1.7e-10 69.7 40 75.0
Sabra15G0025500 Salix brachista HOM05D002170 ORTHO05D007478 1.7e-10 69.7 40 77.5
SalBow5G3655 Salvia bowleyana HOM05D002170 ORTHO05D007478 1.7e-10 69.7 40 77.5
Sed0008892 Sechium edule HOM05D002170 ORTHO05D007478 1.7e-10 69.7 40 75.0
Thecc.03G062200 Theobroma cacao HOM05D002170 ORTHO05D007478 1.7e-10 69.7 40 77.5
TWI81G0098 Tripterygium wilfordii HOM05D002170 ORTHO05D007478 1.7e-10 69.7 40 77.5
GSVIVG01008478001 Vitis vinifera HOM05D002170 ORTHO05D007478 1.7e-10 69.7 40 77.5
Atru.BG.197.p Acer truncatum HOM05D002170 ORTHO05D007478 2.2e-10 69.3 40 75.0
Atru.chr9.1597 Acer truncatum HOM05D002170 ORTHO05D007478 2.2e-10 69.3 40 75.0
Ah.16g108010 Amaranthus hybridus HOM05D002170 ORTHO05D007478 2.2e-10 69.3 40 75.0
MSTRG.9351 Avicennia marina HOM05D002170 ORTHO05D007478 2.2e-10 69.3 40 75.0
BolC3t17203H Brassica oleracea HOM05D002170 ORTHO05D007478 2.2e-10 69.3 40 75.0
Migut.D01219 Erythranthe guttata HOM05D002170 ORTHO05D007478 2.2e-10 69.3 40 75.0
Eucgr.K02286 Eucalyptus grandis HOM05D002170 ORTHO05D007478 2.2e-10 69.3 40 75.0
Glyma.07G105400 Glycine max HOM05D002170 ORTHO05D007478 2.2e-10 69.3 40 72.5
Gohir.A09G175200 Gossypium hirsutum HOM05D002170 ORTHO05D007478 2.2e-10 69.3 40 77.5
Gorai.006G191200 Gossypium raimondii HOM05D002170 ORTHO05D007478 2.2e-10 69.3 40 77.5
Lalb_Chr14g0370711 Lupinus albus HOM05D002170 ORTHO05D007478 2.2e-10 69.3 40 75.0
arahy.Tifrunner.gnm1.ann1.U6RNCV Arachis hypogaea HOM05D002170 ORTHO05D007478 2.9e-10 68.9 40 75.0
EL10Ac2g03531 Beta vulgaris HOM05D002170 ORTHO05D007478 2.9e-10 68.9 40 72.5
CANSAT35G0706 Cannabis sativa HOM05D002170 ORTHO05D007478 2.9e-10 68.9 40 72.5
Cpa.g.sc3.360 Carica papaya HOM05D002170 ORTHO05D007478 2.9e-10 68.9 40 75.0
FvH4_5g17680 Fragaria vesca HOM05D002170 ORTHO05D007478 2.9e-10 68.9 40 72.5
FAN04G0031 Fragaria x ananassa HOM05D002170 ORTHO05D007478 2.9e-10 68.9 40 72.5
FAN08G0558 Fragaria x ananassa HOM05D002170 ORTHO05D007478 2.9e-10 68.9 40 72.5
FAN18G3495 Fragaria x ananassa HOM05D002170 ORTHO05D007478 2.9e-10 68.9 40 72.5
HanXRQChr15g0492101 Helianthus annuus HOM05D002170 ORTHO05D007478 2.9e-10 68.9 33 90.9
MBI19_g09384_MAGBIO Magnolia biondii HOM05D003263 ORTHO05D004801 2.9e-10 68.9 40 72.5
Prupe.5G236800 Prunus persica HOM05D002170 ORTHO05D007478 2.9e-10 68.9 40 72.5
AT3G17810 Arabidopsis thaliana HOM05D002170 ORTHO05D007478 3.8e-10 68.6 40 75.0
arahy.Tifrunner.gnm1.ann1.DTQ5EB Arachis hypogaea HOM05D002170 ORTHO05D007478 3.8e-10 68.6 40 72.5
Carub.0003s1752 Capsella rubella HOM05D002170 ORTHO05D007478 3.8e-10 68.6 40 75.0
Thhalv10020777m.g Eutrema salsugineum HOM05D002170 ORTHO05D007478 3.8e-10 68.6 40 75.0
Hma1.2p1_0471F.1_g159440 Hydrangea macrophylla HOM05D002170 ORTHO05D007478 3.8e-10 68.6 33 87.9
Sp3g15930 Schrenkiella parvula HOM05D002170 ORTHO05D007478 3.8e-10 68.6 40 75.0
C03p49210 Brassica napus HOM05D002170 ORTHO05D007478 4.9e-10 68.2 40 72.5
CiPaw.15G147300 Carya illinoinensis HOM05D002170 ORTHO05D007478 4.9e-10 68.2 40 75.0
Duzib084G0411 Durio zibethinus HOM05D002170 ORTHO05D007478 4.9e-10 68.2 40 75.0
MD14G1239300 Malus domestica HOM05D002170 ORTHO05D007478 4.9e-10 68.2 40 75.0
TAR629G0118 Trochodendron aralioides HOM05D002170 ORTHO05D007478 4.9e-10 68.2 40 75.0
Actinidia09052 Actinidia chinensis HOM05D002170 ORTHO05D007478 6.4e-10 67.8 40 75.0
Ciclev10020301m.g Citrus clementina HOM05D002170 ORTHO05D007478 6.4e-10 67.8 40 75.0
Cc04_g09360 Coffea canephora HOM05D002170 ORTHO05D007478 6.4e-10 67.8 40 75.0
Oeu023513.1 Olea europaea HOM05D002170 ORTHO05D007478 6.4e-10 67.8 40 75.0
PSO384G2182 Papaver somniferum HOM05D002170 ORTHO05D007478 6.4e-10 67.8 40 70.0
HPP92_007961 Vanilla planifolia HOM05D002170 ORTHO05D007478 6.4e-10 67.8 40 75.0
BolC5t33589H Brassica oleracea HOM05D002170 ORTHO05D007478 8.4e-10 67.4 40 75.0
ECA232G0406 Erigeron canadensis HOM05D002170 ORTHO05D007478 8.4e-10 67.4 40 75.0
HanXRQChr16g0511571 Helianthus annuus HOM05D002170 ORTHO05D007478 8.4e-10 67.4 40 75.0
Lsat_1_v5_gn_0_10461 Lactuca sativa HOM05D002170 ORTHO05D007478 8.4e-10 67.4 40 75.0
Lj9C416G6 Lonicera japonica HOM05D002170 ORTHO05D007478 8.4e-10 67.4 40 75.0
RcHm_v2.0_Chr7g0177971 Rosa chinensis HOM05D002170 ORTHO05D007478 8.4e-10 67.4 40 70.0
Aa31LG8G4690 Aethionema arabicum HOM05D002170 ORTHO05D007478 1.1e-09 67.0 40 72.5
AL3G30970 Arabidopsis lyrata HOM05D002170 ORTHO05D007478 1.1e-09 67.0 40 72.5
Lj2g0009559 Lotus japonicus HOM05D002170 ORTHO05D007478 1.1e-09 67.0 40 75.0
Sc04g0004500 Simmondsia chinensis HOM05D002170 ORTHO05D007478 1.1e-09 67.0 40 75.0
BcaC01g03730 Brassica carinata HOM05D002170 ORTHO05D007478 1.4e-09 66.6 40 72.5
CARHR093160 Cardamine hirsuta HOM05D002170 ORTHO05D007478 1.4e-09 66.6 40 72.5
Gohir.D09G169700 Gossypium hirsutum HOM05D002170 ORTHO05D007478 1.4e-09 66.6 40 75.0
AagrBONN_evm.TU.Sc2ySwM_362.1270 Anthoceros agrestis HOM05D002170 ORTHO05D007478 2.4e-09 65.9 33 87.9
CiPaw.16G097200 Carya illinoinensis HOM05D002170 ORTHO05D007478 2.4e-09 65.9 40 75.0
Hund22449 Selenicereus undatus HOM05D002170 ORTHO05D007478 2.4e-09 65.9 40 70.0
BolC1t04600H Brassica oleracea HOM05D002170 ORTHO05D007478 3.2e-09 65.5 40 75.0
CDE04G1365 Ceratophyllum demersum HOM05D002170 ORTHO05D007478 3.2e-09 65.5 40 67.5
CDE06G2490 Ceratophyllum demersum HOM05D002170 ORTHO05D007478 3.2e-09 65.5 40 67.5
PSO339G1858 Papaver somniferum HOM05D002170 ORTHO05D007478 3.2e-09 65.5 40 67.5
Pp3c23_13670 Physcomitrium patens HOM05D002170 ORTHO05D007478 3.2e-09 65.5 33 81.8
Os02g0736400 Oryza sativa ssp. japonica HOM05D002170 ORTHO05D007478 4.2e-09 65.1 40 70.0
Pp3c20_21870 Physcomitrium patens HOM05D002170 ORTHO05D007478 4.2e-09 65.1 40 67.5
Zm00001eb253890 Zea mays HOM05D002170 ORTHO05D007478 4.2e-09 65.1 40 70.0
Aqoxy3G04073 Aquilegia oxysepala HOM05D002170 ORTHO05D007478 5.5e-09 64.7 40 67.5
CAN.G637.44 Capsicum annuum HOM05D002170 ORTHO05D007478 5.5e-09 64.7 40 72.5
Nitab4.5_0000430g0180 Nicotiana tabacum HOM05D002170 ORTHO05D007478 5.5e-09 64.7 40 72.5
Nitab4.5_0006581g0020 Nicotiana tabacum HOM05D002170 ORTHO05D007478 5.5e-09 64.7 40 72.5
Solyc03g097910.4 Solanum lycopersicum HOM05D002170 ORTHO05D007478 5.5e-09 64.7 40 72.5
Sopen03g028630 Solanum pennellii HOM05D002170 ORTHO05D007478 5.5e-09 64.7 40 72.5
PGSC0003DMG400033683 Solanum tuberosum HOM05D002170 ORTHO05D007478 5.5e-09 64.7 40 72.5
AUR62036004 Chenopodium quinoa HOM05D002170 ORTHO05D007478 7.1e-09 64.3 40 67.5
AUR62041617 Chenopodium quinoa HOM05D002170 ORTHO05D007478 7.1e-09 64.3 40 67.5
Mapoly0033s0018 Marchantia polymorpha HOM05D002170 ORTHO05D007478 7.1e-09 64.3 33 84.8
Peaxi162Scf00171g01030 Petunia axillaris HOM05D002170 ORTHO05D007478 7.1e-09 64.3 40 70.0
SHI19063 Sapria himalayana HOM05D002170 ORTHO05D007478 7.1e-09 64.3 33 84.8
Oeu016182.1 Olea europaea HOM05D002170 ORTHO05D007478 9.3e-09 63.9 40 70.0
unitig_27.g25082 Utricularia gibba HOM05D002170 ORTHO05D007478 9.3e-09 63.9 40 70.0
SEGI_10571 Sequoiadendron giganteum HOM05D002170 ORTHO05D007478 2.1e-08 62.8 40 70.0
DCAR_003532 Daucus carota HOM05D002170 ORTHO05D007478 3.5e-08 62.0 40 70.0
SMO356G0689 Selaginella moellendorffii HOM05D002170 ORTHO05D007478 6.0e-08 61.2 33 78.8
ATR0118G019 Amborella trichopoda HOM05D002170 ORTHO05D007478 1.8e-07 59.7 40 65.0
CBR_g39071 Chara braunii HOM05D002170 ORTHO05D007478 3.0e-07 58.9 33 72.7
MCO10G163 Micromonas commoda HOM05D002170 ORTHO05D007478 1.1e-06 57.0 33 69.7


User provided reference genes

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