Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_03032_v3 Cicer arietinum L. HOM05D005906 ORTHO05D007359 2.6e-290 1001.5 567 100.0
Psat7g176600 Pisum sativum HOM05D005906 ORTHO05D007359 6.1e-215 751.1 567 75.1
Glyma.11G102600 Glycine max HOM05D005906 ORTHO05D007359 1.3e-196 690.3 567 67.2
Glyma.11G103100 Glycine max HOM05D005906 ORTHO05D007359 1.6e-194 683.3 519 71.9
Medtr4g074440 Medicago truncatula HOM05D005906 ORTHO05D007359 3.1e-187 659.1 517 75.0
Lj3g0019719 Lotus japonicus HOM05D005906 ORTHO05D007359 7.2e-184 647.9 516 73.3
VMungo1127G1981 Vigna mungo HOM05D005906 ORTHO05D007359 1.3e-180 637.1 521 67.9
Phvul.011G031500 Phaseolus vulgaris HOM05D005906 ORTHO05D007359 2.0e-173 613.2 522 66.9
Lalb_Chr01g0001511 Lupinus albus HOM05D005906 ORTHO05D007359 4.4e-173 612.1 490 68.8
TPR.G21563 Trifolium pratense HOM05D005906 ORTHO05D007359 4.6e-170 602.1 564 63.7
arahy.Tifrunner.gnm1.ann1.LWY0NT Arachis hypogaea HOM05D005906 ORTHO05D007359 6.6e-169 598.2 522 69.0
Glyma.12G028100 Glycine max HOM05D005906 ORTHO05D007359 4.3e-168 595.5 572 62.2
arahy.Tifrunner.gnm1.ann1.KE9NE3 Arachis hypogaea HOM05D005906 ORTHO05D007359 1.2e-159 567.4 586 61.4
Prupe.1G345100 Prunus persica HOM05D005906 ORTHO05D007359 5.1e-121 439.1 524 50.8
Haze_11727 Corylus avellana HOM05D005906 ORTHO05D007359 2.1e-119 433.7 511 53.2
Cfa008717 Carpinus fangiana HOM05D005906 ORTHO05D007359 9.0e-118 428.3 511 51.9
GSVIVG01010209001 Vitis vinifera HOM05D005906 ORTHO05D007359 8.4e-116 421.8 538 48.7
Dinv12052 Davidia involucrata HOM05D005906 ORTHO05D007359 3.4e-109 399.8 504 50.0
RcHm_v2.0_Chr4g0446421 Rosa chinensis HOM05D005906 ORTHO05D007359 7.7e-109 398.7 522 48.7
CSS0007611 Camellia sinensis var. sinensis HOM05D005906 ORTHO05D007359 8.5e-108 395.2 511 48.9
QL03p043467 Quercus lobata HOM05D005906 ORTHO05D007359 1.6e-106 391.0 532 48.1
Atru.chr11.1229 Acer truncatum HOM05D005906 ORTHO05D007359 6.7e-105 385.6 518 47.5
Atru.chr11.1316 Acer truncatum HOM05D005906 ORTHO05D007359 6.7e-105 385.6 518 47.7
CiPaw.05G166700 Carya illinoinensis HOM05D005906 ORTHO05D007359 2.0e-104 384.0 496 48.0
Thecc.02G295800 Theobroma cacao HOM05D005906 ORTHO05D007359 5.3e-102 375.9 435 52.0
MD16G1000200 Malus domestica HOM05D005906 ORTHO05D007359 1.5e-101 374.4 471 49.3
TAR371G1124 Trochodendron aralioides HOM05D005906 ORTHO05D007359 3.4e-101 373.2 533 46.2
Eucgr.G02565 Eucalyptus grandis HOM05D005906 ORTHO05D007359 2.2e-100 370.5 515 47.8
Duzib251G0270 Durio zibethinus HOM05D005906 ORTHO05D007359 1.1e-99 368.2 508 46.3
Actinidia04315 Actinidia chinensis HOM05D005906 ORTHO05D007359 1.4e-99 367.9 406 51.0
Rhsim09G0071900 Rhododendron simsii HOM05D005906 ORTHO05D007359 5.1e-97 359.4 516 46.5
TWI53G0095 Tripterygium wilfordii HOM05D005906 ORTHO05D007359 4.8e-95 352.8 525 44.4
Nn3g18680 Nelumbo nucifera HOM05D005906 ORTHO05D007359 5.3e-94 349.4 521 44.7
Ciclev10030612m.g Citrus clementina HOM05D005906 ORTHO05D007359 4.5e-93 346.3 522 44.4
Aqoxy3G04280 Aquilegia oxysepala HOM05D005906 ORTHO05D007359 2.2e-92 344.0 513 42.7
Potri.010G170400 Populus trichocarpa HOM05D005906 ORTHO05D007359 5.0e-92 342.8 519 44.3
FvH4_4g36700 Fragaria vesca HOM05D005906 ORTHO05D007359 1.5e-91 341.3 499 45.3
FAN12G0559 Fragaria x ananassa HOM05D005906 ORTHO05D007359 2.5e-91 340.5 499 45.3
Sed0021796 Sechium edule HOM05D005906 ORTHO05D007359 9.4e-91 338.6 466 47.2
ATR0618G038 Amborella trichopoda HOM05D005906 ORTHO05D007359 1.2e-90 338.2 531 43.5
Gohir.A01G145818 Gossypium hirsutum HOM05D005906 ORTHO05D007359 3.6e-90 336.7 510 43.9
Gohir.D01G138300 Gossypium hirsutum HOM05D005906 ORTHO05D007359 1.4e-89 334.7 453 47.2
Gorai.002G167700 Gossypium raimondii HOM05D005906 ORTHO05D007359 2.3e-89 334.0 506 45.1
vmacro16015 Vaccinium macrocarpon HOM05D005906 ORTHO05D007359 4.0e-89 333.2 552 44.7
MELO3C024279.2 Cucumis melo HOM05D005906 ORTHO05D007359 8.2e-87 325.5 459 45.5
TWI74G1493 Tripterygium wilfordii HOM05D005906 ORTHO05D007359 8.2e-87 325.5 525 41.9
CsaV3_7G033650 Cucumis sativus L. HOM05D005906 ORTHO05D007359 1.1e-86 325.1 459 46.0
PGR142G1078 Punica granatum HOM05D005906 ORTHO05D007359 1.4e-86 324.7 501 45.9
Sabra10G0130100 Salix brachista HOM05D005906 ORTHO05D007359 5.3e-86 322.8 525 42.9
PSO063G6838 Papaver somniferum HOM05D005906 ORTHO05D007359 7.0e-86 322.4 473 48.4
MD13G1007900 Malus domestica HOM05D005906 ORTHO05D007359 2.0e-85 320.9 371 51.2
FAN07G0309 Fragaria x ananassa HOM05D005906 ORTHO05D007359 3.5e-85 320.1 499 43.1
FAN17G1621 Fragaria x ananassa HOM05D005906 ORTHO05D007359 3.5e-85 320.1 499 43.5
MBI03_g33918_MAGBIO Magnolia biondii HOM05D005906 ORTHO05D007359 7.7e-85 318.9 450 43.1
EL10Ac9g22918 Beta vulgaris HOM05D005906 ORTHO05D007359 1.9e-83 314.3 347 49.9
arahy.Tifrunner.gnm1.ann1.HBZ9IW Arachis hypogaea HOM05D005906 ORTHO05D007359 2.7e-82 310.5 206 75.7
Sc10g0007040 Simmondsia chinensis HOM05D005906 ORTHO05D007359 4.7e-82 309.7 462 44.6
DCAR_006599 Daucus carota HOM05D005906 ORTHO05D007359 6.8e-81 305.8 465 47.5
PSO782G0435 Papaver somniferum HOM05D005906 ORTHO05D007359 2.0e-80 304.3 473 46.9
AL3G33350 Arabidopsis lyrata HOM05D005906 ORTHO05D007359 1.3e-79 301.6 401 47.6
AUR62015199 Chenopodium quinoa HOM05D005906 ORTHO05D007359 1.4e-78 298.1 402 50.5
ClCG09G001670 Citrullus lanatus HOM05D005906 ORTHO05D007359 2.4e-78 297.4 459 45.5
Oeu022359.1 Olea europaea HOM05D005906 ORTHO05D007359 1.6e-77 294.7 533 39.6
Sopen04g003870 Solanum pennellii HOM05D005906 ORTHO05D007359 2.7e-77 293.9 524 43.1
Solyc04g008700.3 Solanum lycopersicum HOM05D005906 ORTHO05D007359 1.7e-76 291.2 524 42.9
AUR62017662 Chenopodium quinoa HOM05D005906 ORTHO05D007359 2.2e-76 290.8 402 50.0
CANSAT64G0121 Cannabis sativa HOM05D005906 ORTHO05D007359 5.5e-75 286.2 454 47.8
Migut.N00351 Erythranthe guttata HOM05D005906 ORTHO05D007359 2.1e-74 284.3 483 44.9
Thhalv10020134m.g Eutrema salsugineum HOM05D005906 ORTHO05D007359 2.1e-74 284.3 408 44.9
AT3G19840 Arabidopsis thaliana HOM05D005906 ORTHO05D007359 4.7e-74 283.1 501 40.5
Carub.0003s1972 Capsella rubella HOM05D005906 ORTHO05D007359 8.0e-74 282.3 391 45.3
Nitab4.5_0001983g0010 Nicotiana tabacum HOM05D005906 ORTHO05D007359 5.2e-73 279.6 542 42.1
Sp3g17850 Schrenkiella parvula HOM05D005906 ORTHO05D007359 3.7e-71 273.5 473 41.9
SGA_v2.0_scaffold317G48430 Striga asiatica HOM05D005906 ORTHO05D007359 1.8e-70 271.2 510 42.5
CAN.G419.29 Capsicum annuum HOM05D005906 ORTHO05D007359 5.4e-70 269.6 505 39.4
HanXRQChr17g0540691 Helianthus annuus HOM05D005906 ORTHO05D007359 6.6e-68 262.7 567 37.4
Peaxi162Scf00329g00515 Petunia axillaris HOM05D005906 ORTHO05D007359 4.3e-67 260.0 508 39.0
Nitab4.5_0000129g0230 Nicotiana tabacum HOM05D005906 ORTHO05D007359 5.6e-67 259.6 534 41.4
Lju1295A4T31 Lonicera japonica HOM05D005906 ORTHO05D007359 8.0e-66 255.8 465 39.1
ECA246G1682 Erigeron canadensis HOM05D005906 ORTHO05D007359 6.4e-63 246.1 516 37.2
CDE04G3187 Ceratophyllum demersum HOM05D005906 ORTHO05D007359 5.9e-61 239.6 512 39.8
Manes.03G080900 Manihot esculenta HOM05D005906 ORTHO05D007359 1.3e-60 238.4 254 56.7
SEGI_27443 Sequoiadendron giganteum HOM05D005906 ORTHO05D007359 2.3e-60 237.7 448 38.8
BraA05t21811Z Brassica rapa HOM05D005906 ORTHO05D007359 3.0e-60 237.3 508 36.4
COL.COLO4_27510 Corchorus olitorius HOM05D005906 ORTHO05D007359 3.9e-60 236.9 275 51.6
BcaB06g26053 Brassica carinata HOM05D005906 ORTHO05D007359 6.6e-60 236.1 488 38.5
C05p44790 Brassica napus HOM05D005906 ORTHO05D007359 6.6e-60 236.1 521 36.5
A05p29280 Brassica napus HOM05D005906 ORTHO05D007359 1.1e-59 235.3 498 37.3
BolC5t33205H Brassica oleracea HOM05D005906 ORTHO05D007359 3.3e-59 233.8 437 38.9
BcaC05g28400 Brassica carinata HOM05D005906 ORTHO05D007359 4.3e-59 233.4 528 36.0
CDE08G0300 Ceratophyllum demersum HOM05D005906 ORTHO05D007359 6.2e-58 229.6 512 36.1
Os10g0485000 Oryza sativa ssp. japonica HOM05D005906 ORTHO05D007359 2.3e-57 227.6 519 36.2
Lsat_1_v5_gn_0_9300 Lactuca sativa HOM05D005906 ORTHO05D007359 1.7e-55 221.5 498 37.1
CARHR095360 Cardamine hirsuta HOM05D005906 ORTHO05D007359 7.0e-54 216.1 236 51.3
unitig_26.g9977 Utricularia gibba HOM05D005906 ORTHO05D007359 6.4e-47 193.0 389 38.3
Aa31LG8G6610 Aethionema arabicum HOM05D005906 ORTHO05D007359 1.4e-41 175.3 443 35.2
HPP92_015160 Vanilla planifolia HOM05D005906 ORTHO05D007359 2.6e-40 171.0 524 30.2
Pp3c7_20890 Physcomitrium patens HOM05D005906 ORTHO05D007359 4.4e-40 170.2 518 33.0
Mapoly0048s0088 Marchantia polymorpha HOM05D005906 ORTHO05D007359 9.9e-40 169.1 422 35.8
Pp3c11_2890 Physcomitrium patens HOM05D005906 ORTHO05D007359 2.4e-38 164.5 483 31.1
CBR_g3777 Chara braunii HOM05D005906 ORTHO05D007359 1.7e-36 158.3 240 40.4
COL.COLO4_16625 Corchorus olitorius HOM05D005906 ORTHO05D007359 2.8e-34 151.0 159 56.0
SMO347G0007 Selaginella moellendorffii HOM05D005906 ORTHO05D007359 6.8e-33 146.4 435 36.1
HanXRQChr13g0425271 Helianthus annuus HOM05D005906 ORTHO05D007359 9.0e-25 119.4 99 56.6
Cpa.g.c31481.2 Carica papaya HOM05D005906 ORTHO05D007359 3.3e-19 100.9 252 35.7
Cre09.g393551 Chlamydomonas reinhardtii HOM05D005906 ORTHO05D007359 1.3e-18 99.0 98 42.9
DCAR_020063 Daucus carota HOM05D002048 ORTHO05D002146 5.5e-06 57.0 59 47.5


User provided reference genes

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