Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_01800_v3 Cicer arietinum L. HOM05D005363 ORTHO05D006607 5.3e-227 790.8 432 100.0
Ca_30473_v3 Cicer arietinum L. HOM05D005363 ORTHO05D006607 3.3e-120 436.0 251 100.0
Medtr2g081100 Medicago truncatula HOM05D005363 ORTHO05D006607 8.2e-87 325.1 230 83.9
Psat2g184560 Pisum sativum HOM05D005363 ORTHO05D006607 5.3e-86 322.4 233 84.5
Glyma.12G219100 Glycine max HOM05D005363 ORTHO05D006607 7.4e-72 275.4 245 71.4
TPR.G32857 Trifolium pratense HOM05D005363 ORTHO05D006607 1.6e-69 267.7 183 89.6
Lalb_Chr25g0286791 Lupinus albus HOM05D005363 ORTHO05D006607 9.8e-64 248.4 245 67.8
arahy.Tifrunner.gnm1.ann1.42XSYF Arachis hypogaea HOM05D005363 ORTHO05D006607 7.0e-62 242.3 234 67.1
arahy.Tifrunner.gnm1.ann1.3P80NP Arachis hypogaea HOM05D005363 ORTHO05D006607 2.7e-61 240.4 234 65.8
Phvul.005G085700 Phaseolus vulgaris HOM05D005363 ORTHO05D006607 4.5e-61 239.6 247 64.0
Lj3g0015043 Lotus japonicus HOM05D005363 ORTHO05D006607 4.2e-59 233.0 225 72.9
CSS0003917 Camellia sinensis var. sinensis HOM05D005363 ORTHO05D006607 8.8e-57 225.3 236 60.2
GSVIVG01014441001 Vitis vinifera HOM05D005363 ORTHO05D006607 4.9e-55 219.5 271 56.5
CiPaw.11G177000 Carya illinoinensis HOM05D005363 ORTHO05D006607 8.3e-55 218.8 240 57.1
QL08p017669 Quercus lobata HOM05D005363 ORTHO05D006607 1.0e-52 211.8 294 50.3
CANSAT11G0579 Cannabis sativa HOM05D005363 ORTHO05D006607 1.3e-52 211.5 245 55.9
RcHm_v2.0_Chr5g0036071 Rosa chinensis HOM05D005363 ORTHO05D006607 1.6e-50 204.5 243 58.0
Ciclev10007579m.g Citrus clementina HOM05D005363 ORTHO05D006607 4.7e-50 203.0 240 57.5
Actinidia35283 Actinidia chinensis HOM05D005363 ORTHO05D006607 8.0e-50 202.2 268 51.1
TAR629G3355 Trochodendron aralioides HOM05D005363 ORTHO05D006607 8.9e-49 198.7 246 52.4
Potri.001G407300 Populus trichocarpa HOM05D005363 ORTHO05D006607 2.0e-48 197.6 259 54.1
Cpa.g.sc12.44 Carica papaya HOM05D005363 ORTHO05D006607 7.5e-48 195.7 268 53.0
MD03G1218100 Malus domestica HOM05D005363 ORTHO05D006607 9.8e-48 195.3 276 54.0
MD11G1235900 Malus domestica HOM05D005363 ORTHO05D006607 9.8e-48 195.3 276 53.6
Duzib170G0704 Durio zibethinus HOM05D005363 ORTHO05D006607 1.7e-47 194.5 233 57.5
Manes.15G082900 Manihot esculenta HOM05D005363 ORTHO05D006607 4.9e-47 193.0 248 48.8
Oeu009902.1 Olea europaea HOM05D005363 ORTHO05D006607 6.3e-47 192.6 245 54.7
vmacro09564 Vaccinium macrocarpon HOM05D005363 ORTHO05D006607 7.0e-46 189.1 255 54.5
Nitab4.5_0007366g0050 Nicotiana tabacum HOM05D005363 ORTHO05D006607 9.2e-46 188.7 247 52.6
Prupe.4G191100 Prunus persica HOM05D005363 ORTHO05D006607 2.7e-45 187.2 277 50.5
Atru.chr2.2912 Acer truncatum HOM05D005363 ORTHO05D006607 3.5e-45 186.8 238 49.6
Thecc.07G070700 Theobroma cacao HOM05D005363 ORTHO05D006607 4.6e-45 186.4 238 54.6
FAN21G3123 Fragaria x ananassa HOM05D005363 ORTHO05D006607 1.7e-44 184.5 239 50.6
Gorai.009G430700 Gossypium raimondii HOM05D005363 ORTHO05D006607 6.6e-44 182.6 203 56.7
Gohir.D05G362100 Gossypium hirsutum HOM05D005363 ORTHO05D006607 1.5e-43 181.4 201 56.7
FvH4_3g21040 Fragaria vesca HOM05D005363 ORTHO05D006607 2.5e-43 180.6 222 60.4
FAN11G3021 Fragaria x ananassa HOM05D005363 ORTHO05D006607 2.5e-43 180.6 222 60.4
Sc03g0009580 Simmondsia chinensis HOM05D005363 ORTHO05D006607 3.3e-43 180.3 256 47.7
EL10Ac4g08052 Beta vulgaris HOM05D005363 ORTHO05D006607 4.3e-43 179.9 262 50.8
Migut.J00972 Erythranthe guttata HOM05D005363 ORTHO05D006607 4.3e-43 179.9 243 51.0
ClCG11G018480 Citrullus lanatus HOM05D005363 ORTHO05D006607 1.6e-42 177.9 261 50.6
PGR083G1158 Punica granatum HOM05D005363 ORTHO05D006607 1.6e-42 177.9 237 54.0
Hma1.2p1_1176F.1_g264200 Hydrangea macrophylla HOM05D005363 ORTHO05D006607 3.6e-42 176.8 299 41.5
Sp6g16300 Schrenkiella parvula HOM05D005363 ORTHO05D006607 3.6e-42 176.8 218 54.1
CAN.G824.3 Capsicum annuum HOM05D005363 ORTHO05D006607 1.0e-41 175.3 245 52.2
Dinv08347 Davidia involucrata HOM05D005363 ORTHO05D006607 1.0e-41 175.3 256 49.2
MSTRG.5819 Avicennia marina HOM05D005363 ORTHO05D006607 1.4e-41 174.9 262 50.8
Gohir.A04G026000 Gossypium hirsutum HOM05D005363 ORTHO05D006607 1.4e-41 174.9 193 56.5
Thhalv10012804m.g Eutrema salsugineum HOM05D005363 ORTHO05D006607 5.2e-41 172.9 217 55.8
Gorai.002G076500 Gossypium raimondii HOM05D005363 ORTHO05D006607 5.2e-41 172.9 284 48.6
CARHR267540 Cardamine hirsuta HOM05D005363 ORTHO05D006607 6.8e-41 172.6 239 51.9
DCAR_018424 Daucus carota HOM05D005363 ORTHO05D006607 8.9e-41 172.2 247 50.2
BcaC04g20356 Brassica carinata HOM05D005363 ORTHO05D006607 1.5e-40 171.4 212 55.2
Peaxi162Scf00290g00111 Petunia axillaris HOM05D005363 ORTHO05D006607 2.0e-40 171.0 215 54.0
COL.COLO4_09485 Corchorus olitorius HOM05D005363 ORTHO05D006607 3.4e-40 170.2 238 54.6
BcaB08g35781 Brassica carinata HOM05D005363 ORTHO05D006607 5.8e-40 169.5 214 57.0
Aqoxy1G03881 Aquilegia oxysepala HOM05D005363 ORTHO05D006607 2.2e-39 167.5 242 47.1
SGA_v2.0_scaffold13G06767 Striga asiatica HOM05D005363 ORTHO05D006607 2.9e-39 167.2 222 50.9
AL8G29590 Arabidopsis lyrata HOM05D005363 ORTHO05D006607 4.9e-39 166.4 221 54.3
RhsimUnG0258300 Rhododendron simsii HOM05D005363 ORTHO05D006607 6.4e-39 166.0 253 46.2
FAN25G3415 Fragaria x ananassa HOM05D005363 ORTHO05D006607 8.3e-39 165.6 216 57.4
Carub.0008s1460 Capsella rubella HOM05D005363 ORTHO05D006607 1.1e-38 165.2 170 62.4
PSO832G2870 Papaver somniferum HOM05D005363 ORTHO05D006607 3.2e-38 163.7 245 49.4
Gohir.D01G056400 Gossypium hirsutum HOM05D005363 ORTHO05D006607 9.2e-38 162.2 242 53.3
HPP92_026534 Vanilla planifolia HOM05D005363 ORTHO05D006607 9.2e-38 162.2 247 43.7
A10p11550 Brassica napus HOM05D005363 ORTHO05D006607 1.2e-37 161.8 200 56.5
C09p44570 Brassica napus HOM05D005363 ORTHO05D006607 1.2e-37 161.8 200 56.5
PSO210G7030 Papaver somniferum HOM05D005363 ORTHO05D006607 1.2e-37 161.8 245 50.2
HanXRQChr03g0077211 Helianthus annuus HOM05D005363 ORTHO05D006607 1.6e-37 161.4 242 44.2
Nn1g03887 Nelumbo nucifera HOM05D005363 ORTHO05D006607 1.6e-37 161.4 251 49.4
CDE12G0487 Ceratophyllum demersum HOM05D005363 ORTHO05D006607 3.5e-37 160.2 253 43.1
AT5G54260 Arabidopsis thaliana HOM05D005363 ORTHO05D006607 4.6e-37 159.8 218 50.9
BolC9t57330H Brassica oleracea HOM05D005363 ORTHO05D006607 7.8e-37 159.1 227 51.1
BraA10t43250Z Brassica rapa HOM05D005363 ORTHO05D006607 7.8e-37 159.1 221 52.9
CsaV3_3G044350 Cucumis sativus L. HOM05D005363 ORTHO05D006607 1.0e-36 158.7 281 49.1
ECA240G2604 Erigeron canadensis HOM05D005363 ORTHO05D006607 1.0e-36 158.7 244 45.5
Hund02186 Selenicereus undatus HOM05D005363 ORTHO05D006607 1.3e-36 158.3 278 42.8
SalBow3G2312 Salvia bowleyana HOM05D005363 ORTHO05D006607 3.9e-36 156.8 291 43.0
HPP92_026561 Vanilla planifolia HOM05D005363 ORTHO05D006607 1.1e-35 155.2 234 44.0
Sed0012869 Sechium edule HOM05D005363 ORTHO05D006607 1.9e-35 154.5 265 47.2
Haze_09533 Corylus avellana HOM05D005363 ORTHO05D006607 4.3e-35 153.3 304 41.1
ATR0693G020 Amborella trichopoda HOM05D005363 ORTHO05D006607 6.2e-34 149.4 275 41.5
Eucgr.F01076 Eucalyptus grandis HOM05D005363 ORTHO05D006607 8.1e-34 149.1 244 47.5
SHI33827 Sapria himalayana HOM05D005363 ORTHO05D006607 1.8e-33 147.9 212 45.8
Sopen09g004090 Solanum pennellii HOM05D005363 ORTHO05D006607 2.3e-33 147.5 139 58.3
MELO3C018187.2 Cucumis melo HOM05D005363 ORTHO05D006607 2.0e-32 144.4 243 50.6
Gohir.A04G025700 Gossypium hirsutum HOM05D005363 ORTHO05D006607 2.9e-31 140.6 202 50.5
Sabra16G0270900 Salix brachista HOM05D005363 ORTHO05D006607 2.9e-31 140.6 251 47.8
unitig_8.g4146 Utricularia gibba HOM05D005363 ORTHO05D006607 8.3e-31 139.0 241 45.6
Lsat_1_v5_gn_9_95600 Lactuca sativa HOM05D005363 ORTHO05D006607 4.1e-30 136.7 249 46.6
Zm00001eb069270 Zea mays HOM05D005363 ORTHO05D006607 5.4e-30 136.3 245 39.6
Aa31LG3G10220 Aethionema arabicum HOM05D005363 ORTHO05D006607 1.6e-29 134.8 240 44.2
Sabra16G0268700 Salix brachista HOM05D005363 ORTHO05D006607 2.7e-29 134.0 229 47.2
MBI15_g19746_MAGBIO Magnolia biondii HOM05D005363 ORTHO05D006607 1.0e-28 132.1 252 40.9
Nitab4.5_0001969g0080 Nicotiana tabacum HOM05D005363 ORTHO05D006607 1.0e-28 132.1 230 47.0
SEGI_35588 Sequoiadendron giganteum HOM05D005363 ORTHO05D006607 1.8e-25 121.3 233 37.8
Eucgr.C01186 Eucalyptus grandis HOM05D005363 ORTHO05D006607 3.1e-25 120.6 279 40.1
Os04g0635900 Oryza sativa ssp. japonica HOM05D005363 ORTHO05D006607 4.0e-25 120.2 246 37.8
THA.LOC104813315 Tarenaya hassleriana HOM05D005363 ORTHO05D006607 1.2e-24 118.6 87 66.7
Lj8C160T16 Lonicera japonica HOM05D005363 ORTHO05D006607 2.6e-24 117.5 251 44.6
AUR62029306 Chenopodium quinoa HOM05D005363 ORTHO05D006607 4.9e-23 113.2 234 38.5
arahy.Tifrunner.gnm1.ann1.Q8WXS4 Arachis hypogaea HOM05D005363 ORTHO05D006607 1.4e-22 111.7 88 68.2
Cc06_g05460 Coffea canephora HOM05D005363 ORTHO05D006607 2.1e-21 107.8 66 75.8
FAN16G0276 Fragaria x ananassa HOM05D005363 ORTHO05D006607 1.3e-20 105.1 135 63.7
AUR62015595 Chenopodium quinoa HOM05D005363 ORTHO05D006607 7.3e-19 99.4 169 39.1
GSVIVG01001519001 Vitis vinifera HOM05D005363 ORTHO05D006607 1.6e-18 98.2 69 66.7
Mapoly0023s0117 Marchantia polymorpha HOM05D005363 ORTHO05D006607 6.2e-18 96.3 255 35.7
AagrBONN_evm.TU.Sc2ySwM_117.2240 Anthoceros agrestis HOM05D005363 ORTHO05D006607 2.6e-16 90.9 238 39.1
Pp3c24_2350 Physcomitrium patens HOM05D005363 ORTHO05D006607 1.1e-14 85.5 126 39.7
GSVIVG01004486001 Vitis vinifera HOM05D004774 ORTHO05D005514 4.6e-13 80.1 261 31.4
Cc06_g05450 Coffea canephora HOM05D005363 ORTHO05D006607 1.3e-12 78.6 162 46.9
VMungo1080G1535 Vigna mungo HOM05D005363 ORTHO05D006607 1.5e-11 75.1 52 69.2
SMO347G0170 Selaginella moellendorffii HOM05D005363 ORTHO05D006607 8.1e-10 69.3 80 46.2
arahy.Tifrunner.gnm1.ann1.9SD0MH Arachis hypogaea HOM05D005363 ORTHO05D015967 1.8e-09 68.2 50 70.0
GSVIVG01002726001 Vitis vinifera HOM05D005363 ORTHO05D006607 4.9e-07 60.1 79 46.8
GSVIVG01001483001 Vitis vinifera HOM05D005363 ORTHO05D006607 1.4e-06 58.5 76 46.1
GSVIVG01001488001 Vitis vinifera HOM05D005363 ORTHO05D006607 5.4e-06 56.6 107 36.4


User provided reference genes

Program Settings