Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_00765_v3 Cicer arietinum L. HOM05D006551 ORTHO05D008546 2.3e-142 508.8 244 100.0
Lj6g0027493 Lotus japonicus HOM05D006551 ORTHO05D008546 1.4e-128 463.0 237 91.1
TPR.G17557 Trifolium pratense HOM05D006551 ORTHO05D008546 4.1e-128 461.5 246 91.1
Glyma.09G014800 Glycine max HOM05D006551 ORTHO05D008546 6.2e-124 447.6 238 89.1
Phvul.006G137400 Phaseolus vulgaris HOM05D006551 ORTHO05D008546 4.4e-122 441.4 237 87.8
Phvul.006G137611 Phaseolus vulgaris HOM05D006551 ORTHO05D008546 1.7e-121 439.5 237 87.8
Medtr2g027110 Medicago truncatula HOM05D006551 ORTHO05D008546 1.4e-120 436.4 233 89.7
Lalb_Chr20g0119561 Lupinus albus HOM05D006551 ORTHO05D008546 1.2e-116 423.3 237 84.8
arahy.Tifrunner.gnm1.ann1.TFI8LM Arachis hypogaea HOM05D006551 ORTHO05D008546 3.6e-116 421.8 238 84.5
VMungo0540G0952 Vigna mungo HOM05D006551 ORTHO05D008546 8.1e-116 420.6 240 84.2
arahy.Tifrunner.gnm1.ann1.HFV92P Arachis hypogaea HOM05D006551 ORTHO05D008546 5.2e-115 417.9 238 83.6
QL05p067740 Quercus lobata HOM05D006551 ORTHO05D008546 1.5e-101 373.2 246 74.0
Thecc.06G241400 Theobroma cacao HOM05D006551 ORTHO05D008546 1.3e-100 370.2 240 73.3
CSS0008489 Camellia sinensis var. sinensis HOM05D006551 ORTHO05D008546 4.8e-100 368.2 229 77.3
CSS0047745 Camellia sinensis var. sinensis HOM05D006551 ORTHO05D008546 2.4e-99 365.9 229 76.9
Prupe.4G003400 Prunus persica HOM05D006551 ORTHO05D008546 1.3e-97 360.1 227 72.7
TAR629G1611 Trochodendron aralioides HOM05D006551 ORTHO05D008546 2.9e-97 359.0 233 71.2
THA.LOC104815473 Tarenaya hassleriana HOM05D006551 ORTHO05D008546 3.8e-97 358.6 227 74.4
Dinv15335 Davidia involucrata HOM05D006551 ORTHO05D008546 1.4e-96 356.7 230 72.6
Manes.09G083300 Manihot esculenta HOM05D006551 ORTHO05D008546 1.4e-96 356.7 226 73.5
CiPaw.10G082200 Carya illinoinensis HOM05D006551 ORTHO05D008546 4.2e-96 355.1 246 69.5
Duzib160G0007 Durio zibethinus HOM05D006551 ORTHO05D008546 2.1e-95 352.8 238 69.7
RcHm_v2.0_Chr5g0000451 Rosa chinensis HOM05D006551 ORTHO05D008546 2.7e-95 352.4 238 69.7
TWI38G1730 Tripterygium wilfordii HOM05D006551 ORTHO05D008546 2.7e-95 352.4 238 71.0
Aa31LG2G12400 Aethionema arabicum HOM05D006551 ORTHO05D008546 4.6e-95 351.7 239 70.3
A09p57680 Brassica napus HOM05D006551 ORTHO05D008546 7.9e-95 350.9 240 71.2
FvH4_3g00300 Fragaria vesca HOM05D006551 ORTHO05D008546 7.9e-95 350.9 226 71.7
Potri.006G004500 Populus trichocarpa HOM05D006551 ORTHO05D008546 1.8e-94 349.7 222 73.0
Sabra06G0003800 Salix brachista HOM05D006551 ORTHO05D008546 2.3e-94 349.4 221 72.9
Sc17g0008010 Simmondsia chinensis HOM05D006551 ORTHO05D008546 6.7e-94 347.8 221 74.2
Cfa000032 Carpinus fangiana HOM05D006551 ORTHO05D008546 8.7e-94 347.4 245 66.9
AL4G11740 Arabidopsis lyrata HOM05D006551 ORTHO05D008546 1.1e-93 347.1 233 71.2
BcaC07g41084 Brassica carinata HOM05D006551 ORTHO05D008546 1.9e-93 346.3 233 72.1
BcaC07g41085 Brassica carinata HOM05D006551 ORTHO05D008546 1.9e-93 346.3 233 72.1
C08p40880 Brassica napus HOM05D006551 ORTHO05D008546 1.9e-93 346.3 233 72.1
Atru.chr1.1073 Acer truncatum HOM05D006551 ORTHO05D008546 2.5e-93 345.9 236 69.5
MD10G1339500 Malus domestica HOM05D006551 ORTHO05D008546 2.5e-93 345.9 245 69.8
BolC8t51654H Brassica oleracea HOM05D006551 ORTHO05D008546 7.4e-93 344.4 240 70.4
BraA09t41161Z Brassica rapa HOM05D006551 ORTHO05D008546 7.4e-93 344.4 230 71.3
AT2G22260 Arabidopsis thaliana HOM05D006551 ORTHO05D008546 1.6e-92 343.2 233 70.0
Carub.0004s0140 Capsella rubella HOM05D006551 ORTHO05D008546 8.2e-92 340.9 233 70.4
Migut.M01446 Erythranthe guttata HOM05D006551 ORTHO05D008546 1.1e-91 340.5 223 70.9
Ciclev10016440m.g Citrus clementina HOM05D006551 ORTHO05D008546 1.4e-91 340.1 230 70.4
Gorai.011G008500 Gossypium raimondii HOM05D006551 ORTHO05D008546 2.4e-91 339.3 234 68.4
Hund08692 Selenicereus undatus HOM05D006551 ORTHO05D008546 4.0e-91 338.6 221 71.9
Sopen04g007100 Solanum pennellii HOM05D006551 ORTHO05D008546 5.3e-91 338.2 222 71.2
SalBow8G1397 Salvia bowleyana HOM05D006551 ORTHO05D008546 1.5e-90 336.7 238 66.4
SalBow8G2449 Salvia bowleyana HOM05D006551 ORTHO05D008546 1.5e-90 336.7 238 66.4
Gohir.A10G007900 Gossypium hirsutum HOM05D006551 ORTHO05D008546 2.0e-90 336.3 234 67.5
PSO210G1263 Papaver somniferum HOM05D006551 ORTHO05D008546 2.0e-90 336.3 230 68.7
Aqoxy1G04265 Aquilegia oxysepala HOM05D006551 ORTHO05D008546 3.4e-90 335.5 228 67.5
Eucgr.E03850 Eucalyptus grandis HOM05D006551 ORTHO05D008546 3.4e-90 335.5 223 66.4
Hma1.2p1_1175F.1_g264070 Hydrangea macrophylla HOM05D006551 ORTHO05D008546 1.3e-89 333.6 214 72.4
Lsat_1_v5_gn_7_12961 Lactuca sativa HOM05D006551 ORTHO05D008546 1.3e-89 333.6 225 68.4
Psat1g172360 Pisum sativum HOM05D006551 ORTHO05D008546 2.9e-89 332.4 168 93.5
PGSC0003DMG400015008 Solanum tuberosum HOM05D006551 ORTHO05D008546 2.9e-89 332.4 222 69.4
HPP92_018202 Vanilla planifolia HOM05D006551 ORTHO05D008546 3.8e-89 332.0 224 66.1
PSO210G0886 Papaver somniferum HOM05D006551 ORTHO05D008546 6.5e-89 331.3 230 66.5
MSTRG.7126 Avicennia marina HOM05D006551 ORTHO05D008546 1.4e-88 330.1 231 68.0
PGR042G3561 Punica granatum HOM05D006551 ORTHO05D008546 1.4e-88 330.1 212 67.9
COL.COLO4_31943 Corchorus olitorius HOM05D000879 ORTHO05D002864 2.5e-88 329.3 220 69.1
Cc09_g00290 Coffea canephora HOM05D006551 ORTHO05D008546 5.5e-88 328.2 211 69.7
Gohir.D10G007800 Gossypium hirsutum HOM05D006551 ORTHO05D008546 9.3e-88 327.4 234 65.8
MELO3C008006.2 Cucumis melo HOM05D006551 ORTHO05D008546 1.2e-87 327.0 226 66.4
Eucgr.L00150 Eucalyptus grandis HOM05D006551 ORTHO05D008546 1.2e-87 327.0 201 75.6
ECA248G0604 Erigeron canadensis HOM05D006551 ORTHO05D008546 2.7e-87 325.9 228 66.2
ClCG01G021210 Citrullus lanatus HOM05D006551 ORTHO05D008546 7.9e-87 324.3 217 67.7
CARHR113490 Cardamine hirsuta HOM05D006551 ORTHO05D008546 3.9e-86 322.0 228 67.1
CsaV3_6G048230 Cucumis sativus L. HOM05D006551 ORTHO05D008546 6.7e-86 321.2 226 65.5
HanXRQChr05g0129031 Helianthus annuus HOM05D006551 ORTHO05D008546 8.7e-86 320.9 221 67.0
SGA_v2.0_scaffold7G03692 Striga asiatica HOM05D006551 ORTHO05D008546 1.1e-85 320.5 208 71.6
Lj1C1247T0 Lonicera japonica HOM05D006551 ORTHO05D008546 1.9e-85 319.7 255 63.1
Sed0011139 Sechium edule HOM05D006551 ORTHO05D008546 1.9e-85 319.7 225 64.9
EL10Ac8g20269 Beta vulgaris HOM05D006551 ORTHO05D008546 3.3e-85 318.9 231 65.8
Nitab4.5_0000147g0330 Nicotiana tabacum HOM05D006551 ORTHO05D008546 7.4e-85 317.8 219 68.0
CAN.G1263.6 Capsicum annuum HOM05D006551 ORTHO05D008546 2.2e-84 316.2 205 70.7
Peaxi162Scf00811g00222 Petunia axillaris HOM05D006551 ORTHO05D008546 2.8e-84 315.8 220 69.1
DCAR_002245 Daucus carota HOM05D006551 ORTHO05D008546 8.2e-84 314.3 216 67.1
unitig_37.g12177 Utricularia gibba HOM05D006551 ORTHO05D008546 1.1e-83 313.9 248 61.3
Cpa.g.sc27.224 Carica papaya HOM05D006551 ORTHO05D008546 4.5e-82 308.5 239 65.7
Zm00001eb380830 Zea mays HOM05D006551 ORTHO05D008546 1.4e-80 303.5 218 64.7
Ah.14g087400 Amaranthus hybridus HOM05D006551 ORTHO05D008546 1.9e-80 303.1 228 63.6
Nitab4.5_0006294g0080 Nicotiana tabacum HOM05D006551 ORTHO05D008546 1.9e-80 303.1 219 66.7
BcaB08g35054 Brassica carinata HOM05D006551 ORTHO05D008546 2.1e-79 299.7 205 70.7
AUR62021809 Chenopodium quinoa HOM05D006551 ORTHO05D008546 1.4e-78 297.0 220 64.1
vmacro03605 Vaccinium macrocarpon HOM05D006551 ORTHO05D008546 2.5e-72 276.2 171 77.2
Oeu025969.1 Olea europaea HOM05D006551 ORTHO05D008546 5.5e-72 275.0 182 67.6
SpUn1059_0010 Schrenkiella parvula HOM05D006551 ORTHO05D008546 5.1e-70 268.5 169 76.3
Hma1.2p1_1175F.1_g264060 Hydrangea macrophylla HOM05D006551 ORTHO05D008546 1.3e-68 263.8 145 79.3
Nn1g07524 Nelumbo nucifera HOM05D006551 ORTHO05D008546 3.1e-67 259.2 161 69.6
PGR004G0828 Punica granatum HOM05D006551 ORTHO05D008546 4.1e-67 258.8 182 64.8
Solyc04g015080.4 Solanum lycopersicum HOM05D006551 ORTHO05D008546 9.1e-67 257.7 156 71.8
Haze_07021 Corylus avellana HOM05D006551 ORTHO05D008546 6.5e-65 251.5 240 55.4
Rhsim13G0140300 Rhododendron simsii HOM05D006551 ORTHO05D008546 6.5e-65 251.5 159 71.7
Eucgr.E03848 Eucalyptus grandis HOM05D006551 ORTHO05D008546 5.5e-64 248.4 160 63.8
ATR0751G145 Amborella trichopoda HOM05D006551 ORTHO05D008546 1.1e-61 240.7 164 68.9
AUR62012856 Chenopodium quinoa HOM05D006551 ORTHO05D008546 4.4e-61 238.8 170 67.1
Psat2g019160 Pisum sativum HOM05D006551 ORTHO05D008546 1.5e-56 223.8 118 89.8
AagrBONN_evm.TU.Sc2ySwM_362.1805 Anthoceros agrestis HOM05D006551 ORTHO05D008546 4.8e-52 208.8 291 38.1
Peaxi162Scf00827g00057 Petunia axillaris HOM05D006551 ORTHO05D008546 6.5e-49 198.4 165 60.0
AagrBONN_evm.TU.Sc2ySwM_369.541 Anthoceros agrestis HOM05D006551 ORTHO05D008546 1.8e-46 190.3 247 40.9
SEGI_23146 Sequoiadendron giganteum HOM05D006551 ORTHO05D008546 2.3e-46 189.9 224 44.6
SHI31451 Sapria himalayana HOM05D006551 ORTHO05D008546 5.4e-43 178.7 114 78.1
Glyma.15G120500 Glycine max HOM05D006551 ORTHO05D008546 5.0e-41 172.2 111 78.4
CBR_g3891 Chara braunii HOM05D006551 ORTHO05D008546 1.0e-33 147.9 141 44.7
Sed0010073 Sechium edule HOM05D006551 ORTHO05D008546 1.4e-30 137.5 185 38.9
SHI31456 Sapria himalayana HOM05D006551 ORTHO05D008546 2.7e-26 123.2 94 57.4
VMungo0540G1416 Vigna mungo HOM05D000555 ORTHO05D001906 1.4e-22 110.9 73 75.3
VMungo0540G1474 Vigna mungo HOM05D006551 ORTHO05D008546 4.0e-22 109.4 65 84.6
Hma1.2p1_1322F.1_g275500 Hydrangea macrophylla HOM05D006551 ORTHO05D008546 1.1e-16 91.3 70 68.6
Sp4g01310 Schrenkiella parvula HOM05D006551 ORTHO05D008546 3.3e-16 89.7 71 59.2
Cfa024106 Carpinus fangiana HOM05D006551 ORTHO05D008546 1.2e-15 87.8 117 40.2
Pp3c2_11520 Physcomitrium patens HOM05D006551 ORTHO05D008546 5.2e-14 82.4 117 41.0
PRCOL_00002494 Prasinoderma coloniale HOM05D006551 ORTHO05D008546 7.5e-13 78.6 165 33.3
Os06g0286310 Oryza sativa ssp. japonica HOM05D006551 ORTHO05D008546 1.7e-12 77.4 56 57.1
PRCOL_00002998 Prasinoderma coloniale HOM05D006551 ORTHO05D008546 3.2e-11 73.2 169 33.1
Solyc12g056880.2 Solanum lycopersicum HOM05D006551 ORTHO05D008546 5.4e-11 72.4 38 76.3
HanXRQChr17g0567191 Helianthus annuus HOM05D000289 ORTHO05D000208 7.8e-10 68.6 52 57.7
PRCOL_00003886 Prasinoderma coloniale HOM05D006551 ORTHO05D044110 3.9e-09 66.2 184 27.7
Cfa024972 Carpinus fangiana HOM05D006551 ORTHO05D043702 4.3e-08 62.8 124 33.9
Psat1g141560 Pisum sativum HOM05D006551 ORTHO05D008546 2.1e-07 60.5 43 62.8


User provided reference genes

Program Settings