Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_00591_v3 Cicer arietinum L. HOM05D002494 ORTHO05D002673 0.0e+00 1134.4 560 100.0
TPR.G18023 Trifolium pratense HOM05D002494 ORTHO05D002673 2.3e-259 898.7 560 81.6
Psat1g185440 Pisum sativum HOM05D002494 ORTHO05D002673 4.7e-252 874.4 566 78.3
Medtr2g020960 Medicago truncatula HOM05D002494 ORTHO05D002673 2.7e-247 858.6 563 78.0
Lj6g0008158 Lotus japonicus HOM05D002494 ORTHO05D002673 1.9e-224 782.7 560 71.4
Glyma.15G100800 Glycine max HOM05D002494 ORTHO05D002673 3.2e-224 781.9 565 72.7
Glyma.13G211900 Glycine max HOM05D002494 ORTHO05D002673 2.6e-218 762.3 565 70.3
Phvul.006G158000 Phaseolus vulgaris HOM05D002494 ORTHO05D002673 1.9e-208 729.6 562 67.6
VMungo0540G1417 Vigna mungo HOM05D002494 ORTHO05D002673 1.5e-205 719.9 562 66.9
arahy.Tifrunner.gnm1.ann1.2UVC2V Arachis hypogaea HOM05D002494 ORTHO05D002673 6.4e-201 704.5 562 64.4
Lalb_Chr15g0087191 Lupinus albus HOM05D002494 ORTHO05D002673 1.6e-199 699.9 566 64.5
arahy.Tifrunner.gnm1.ann1.I64MY8 Arachis hypogaea HOM05D002494 ORTHO05D002673 1.6e-196 689.9 561 63.3
CiPaw.02G089600 Carya illinoinensis HOM05D002494 ORTHO05D002673 4.8e-156 555.4 578 51.2
Dinv38353 Davidia involucrata HOM05D002494 ORTHO05D002673 2.9e-153 546.2 591 52.6
Duzib212G0707 Durio zibethinus HOM05D002494 ORTHO05D002673 2.0e-149 533.5 585 49.7
Prupe.1G147400 Prunus persica HOM05D002494 ORTHO05D002673 2.0e-149 533.5 587 50.6
Manes.03G187900 Manihot esculenta HOM05D002494 ORTHO05D002673 2.8e-148 529.6 570 51.1
Dinv44457 Davidia involucrata HOM05D002494 ORTHO05D002673 9.1e-147 524.6 581 50.8
Actinidia23457 Actinidia chinensis HOM05D002494 ORTHO05D002673 2.7e-146 523.1 588 49.3
Actinidia40212 Actinidia chinensis HOM05D002494 ORTHO05D002673 7.7e-146 521.5 586 50.0
Thecc.04G272000 Theobroma cacao HOM05D002494 ORTHO05D002673 1.0e-145 521.2 589 48.9
CSS0019247 Camellia sinensis var. sinensis HOM05D002494 ORTHO05D002673 1.5e-144 517.3 577 49.0
Sabra10G0012600 Salix brachista HOM05D002494 ORTHO05D002673 1.9e-144 516.9 587 47.5
Potri.010G028200 Populus trichocarpa HOM05D002494 ORTHO05D002673 3.6e-143 512.7 587 47.7
MD16G1179800 Malus domestica HOM05D002494 ORTHO05D002673 2.6e-141 506.5 588 49.1
Haze_01007 Corylus avellana HOM05D002494 ORTHO05D002673 1.3e-140 504.2 576 48.1
COL.COLO4_13973 Corchorus olitorius HOM05D002494 ORTHO05D002673 4.9e-140 502.3 591 48.4
Cfa015542 Carpinus fangiana HOM05D002494 ORTHO05D002673 1.4e-139 500.7 576 47.7
TWI09G0743 Tripterygium wilfordii HOM05D002494 ORTHO05D002673 7.0e-139 498.4 581 48.0
CSS0005255 Camellia sinensis var. sinensis HOM05D002494 ORTHO05D002673 1.6e-138 497.3 577 48.2
MD13G1178600 Malus domestica HOM05D002494 ORTHO05D002673 3.5e-138 496.1 590 48.0
Lj6C665T16 Lonicera japonica HOM05D002494 ORTHO05D002673 7.8e-138 495.0 574 46.9
CSS0038359 Camellia sinensis var. sinensis HOM05D002494 ORTHO05D002673 1.3e-137 494.2 577 48.0
vmacro08242 Vaccinium macrocarpon HOM05D002494 ORTHO05D002673 3.3e-136 489.6 596 46.0
Nn3g21175 Nelumbo nucifera HOM05D002494 ORTHO05D002673 6.1e-135 485.3 605 44.8
RcHm_v2.0_Chr4g0419781 Rosa chinensis HOM05D002494 ORTHO05D002673 8.0e-135 485.0 590 46.3
FAN17G1311 Fragaria x ananassa HOM05D002494 ORTHO05D002673 1.8e-134 483.8 590 46.3
TAR365G0297 Trochodendron aralioides HOM05D002494 ORTHO05D002673 6.8e-134 481.9 611 46.0
FAN22G2205 Fragaria x ananassa HOM05D002494 ORTHO05D002673 7.5e-133 478.4 590 46.1
Gorai.006G256000 Gossypium raimondii HOM05D002494 ORTHO05D002673 9.8e-133 478.0 589 46.2
Gohir.D09G233100 Gossypium hirsutum HOM05D002494 ORTHO05D002673 1.3e-132 477.6 579 47.0
FvH4_4g13920 Fragaria vesca HOM05D002494 ORTHO05D002673 1.1e-131 474.6 590 46.3
FAN12G0871 Fragaria x ananassa HOM05D002494 ORTHO05D002673 2.4e-131 473.4 590 46.3
Rhsim04G0212900 Rhododendron simsii HOM05D002494 ORTHO05D002673 1.2e-130 471.1 578 45.7
Ciclev10004135m.g Citrus clementina HOM05D002494 ORTHO05D002673 2.7e-130 469.9 600 45.8
DCAR_027134 Daucus carota HOM05D002494 ORTHO05D002673 1.1e-128 464.5 590 45.1
SalBow2G0767 Salvia bowleyana HOM05D002494 ORTHO05D002673 5.6e-128 462.2 585 43.9
Oeu032696.1 Olea europaea HOM05D002494 ORTHO05D002673 6.2e-127 458.8 582 44.2
MSTRG.3973 Avicennia marina HOM05D002494 ORTHO05D002673 1.8e-126 457.2 578 42.2
PSO302G0174 Papaver somniferum HOM05D002494 ORTHO05D002673 4.4e-125 452.6 598 43.0
Peaxi162Scf00592g00111 Petunia axillaris HOM05D002494 ORTHO05D002673 7.5e-125 451.8 572 45.1
CANSAT78G1223 Cannabis sativa HOM05D002494 ORTHO05D002673 2.2e-124 450.3 583 46.5
Cpa.g.sc16.69 Carica papaya HOM05D002494 ORTHO05D002673 2.9e-124 449.9 559 46.7
PGR004G0605 Punica granatum HOM05D002494 ORTHO05D002673 3.7e-124 449.5 584 45.0
PSO170G5860 Papaver somniferum HOM05D002494 ORTHO05D002673 2.4e-123 446.8 603 42.5
Migut.G00286 Erythranthe guttata HOM05D002494 ORTHO05D002673 2.7e-122 443.4 582 44.2
Sc13g0003790 Simmondsia chinensis HOM05D002494 ORTHO05D002673 1.9e-120 437.2 565 43.9
Aqoxy2G03189 Aquilegia oxysepala HOM05D002494 ORTHO05D002673 9.5e-120 434.9 608 41.4
THA.LOC104818830 Tarenaya hassleriana HOM05D002494 ORTHO05D002673 8.9e-118 428.3 589 43.8
Cc03_g02770 Coffea canephora HOM05D002494 ORTHO05D002673 2.6e-117 426.8 547 43.3
Nitab4.5_0001505g0010 Nicotiana tabacum HOM05D002494 ORTHO05D002673 2.6e-117 426.8 569 43.2
Hund09628 Selenicereus undatus HOM05D002494 ORTHO05D002673 5.8e-117 425.6 585 41.0
Nitab4.5_0000010g0140 Nicotiana tabacum HOM05D002494 ORTHO05D002673 9.9e-117 424.9 569 43.2
BraA05t22893Z Brassica rapa HOM05D002494 ORTHO05D002673 1.7e-116 424.1 578 42.9
Aa31LG5G16810 Aethionema arabicum HOM05D002494 ORTHO05D002673 2.2e-116 423.7 596 43.1
CAN.G290.14 Capsicum annuum HOM05D002494 ORTHO05D002673 8.3e-116 421.8 574 42.3
A05p41740 Brassica napus HOM05D002494 ORTHO05D002673 1.2e-114 417.9 573 41.7
Eucgr.H03640 Eucalyptus grandis HOM05D002494 ORTHO05D002673 4.6e-114 416.0 600 41.2
Sed0003410 Sechium edule HOM05D002494 ORTHO05D002673 1.0e-113 414.8 573 40.5
AT3G06290 Arabidopsis thaliana HOM05D002494 ORTHO05D002673 1.7e-113 414.1 592 41.0
Sp3g05200 Schrenkiella parvula HOM05D002494 ORTHO05D002673 3.0e-113 413.3 592 40.7
Thhalv10019892m.g Eutrema salsugineum HOM05D002494 ORTHO05D002673 8.6e-113 411.8 591 41.1
BcaC05g30043 Brassica carinata HOM05D002494 ORTHO05D002673 1.1e-112 411.4 589 41.1
AL3G17180 Arabidopsis lyrata HOM05D002494 ORTHO05D002673 5.6e-112 409.1 592 40.0
Sopen12g016080 Solanum pennellii HOM05D002494 ORTHO05D002673 5.6e-112 409.1 579 40.9
Carub.0003s0571 Capsella rubella HOM05D002494 ORTHO05D002673 1.2e-111 407.9 593 40.1
BolC3t16488H Brassica oleracea HOM05D002494 ORTHO05D002673 1.6e-111 407.5 580 41.2
SGA_v2.0_scaffold237G43852 Striga asiatica HOM05D002494 ORTHO05D002673 2.1e-111 407.1 577 40.6
BcaB03g14668 Brassica carinata HOM05D002494 ORTHO05D002673 2.8e-111 406.8 580 41.0
A03p34620 Brassica napus HOM05D002494 ORTHO05D002673 1.1e-110 404.8 584 40.4
C03p42080 Brassica napus HOM05D002494 ORTHO05D002673 1.1e-110 404.8 580 41.0
BraA03t12638Z Brassica rapa HOM05D002494 ORTHO05D002673 1.1e-110 404.8 584 40.4
ClCG05G005560 Citrullus lanatus HOM05D002494 ORTHO05D002673 3.1e-110 403.3 580 41.7
CARHR080780 Cardamine hirsuta HOM05D002494 ORTHO05D002673 8.9e-110 401.7 593 39.8
AUR62024657 Chenopodium quinoa HOM05D002494 ORTHO05D002673 1.2e-109 401.4 576 40.3
SHI00347 Sapria himalayana HOM05D002494 ORTHO05D002673 2.0e-109 400.6 572 41.6
EL10As5g23527 Beta vulgaris HOM05D002494 ORTHO05D002673 2.6e-109 400.2 585 40.3
BcaC05g30040 Brassica carinata HOM05D002494 ORTHO05D002673 2.4e-107 393.7 580 39.7
CsaV3_3G013900 Cucumis sativus L. HOM05D002494 ORTHO05D002673 2.4e-107 393.7 575 41.2
MELO3C006582.2 Cucumis melo HOM05D002494 ORTHO05D002673 2.1e-106 390.6 577 40.7
C05p60980 Brassica napus HOM05D002494 ORTHO05D002673 1.0e-105 388.3 440 46.4
BcaC05g29801 Brassica carinata HOM05D002494 ORTHO05D002673 5.1e-105 386.0 574 41.8
AUR62011813 Chenopodium quinoa HOM05D002494 ORTHO05D002673 5.6e-104 382.5 576 39.1
Ah.02g112310 Amaranthus hybridus HOM05D002494 ORTHO05D002673 7.3e-104 382.1 580 37.4
unitig_748.g8564 Utricularia gibba HOM05D002494 ORTHO05D002673 7.6e-101 372.1 577 38.1
Zm00001eb329290 Zea mays HOM05D002494 ORTHO05D002673 7.6e-101 372.1 592 37.3
ATR0626G271 Amborella trichopoda HOM05D002494 ORTHO05D002673 6.6e-97 359.0 596 37.4
ECA233G5784 Erigeron canadensis HOM05D002494 ORTHO05D002673 4.8e-95 352.8 569 40.1
Zm00001eb329320 Zea mays HOM05D002494 ORTHO05D002673 1.8e-94 350.9 593 35.8
Zm00001eb329350 Zea mays HOM05D002494 ORTHO05D002673 1.1e-91 341.7 448 40.4
Atru.chr4.2700 Acer truncatum HOM05D002494 ORTHO05D002673 4.2e-91 339.7 331 53.8
HanXRQChr09g0251551 Helianthus annuus HOM05D002494 ORTHO05D002673 3.3e-88 330.1 566 40.1
Lsat_1_v5_gn_6_69301 Lactuca sativa HOM05D002494 ORTHO05D002673 2.1e-87 327.4 572 38.8
Gohir.A09G232000 Gossypium hirsutum HOM05D002494 ORTHO05D002673 8.4e-76 288.9 330 50.0
CDE04G2572 Ceratophyllum demersum HOM05D002494 ORTHO05D002673 5.3e-70 269.6 588 33.0
TPR.G14187 Trifolium pratense HOM05D002494 ORTHO05D002673 1.3e-68 265.0 513 37.0
Zm00001eb329310 Zea mays HOM05D002494 ORTHO05D002673 1.4e-67 261.5 460 34.8
GSVIVG01017853001 Vitis vinifera HOM05D002494 ORTHO05D002673 6.9e-62 242.7 252 52.8
AagrBONN_evm.TU.Sc2ySwM_362.842 Anthoceros agrestis HOM05D002494 ORTHO05D002673 5.9e-45 186.4 539 26.7
HPP92_013672 Vanilla planifolia HOM05D002494 ORTHO05D002673 2.9e-44 184.1 273 37.0
SEGI_28422 Sequoiadendron giganteum HOM05D002494 ORTHO05D002673 2.1e-34 151.4 230 36.5
Mapoly0096s0011 Marchantia polymorpha HOM05D002494 ORTHO05D002673 1.3e-31 142.1 456 25.4
Pp3c3_29590 Physcomitrium patens HOM05D002494 ORTHO05D002673 1.8e-30 138.3 436 26.6
BcaB03g14660 Brassica carinata HOM05D002494 ORTHO05D002673 7.0e-30 136.3 184 42.4
BcaB03g14661 Brassica carinata HOM05D002494 ORTHO05D002673 7.0e-30 136.3 288 32.3
HPP92_013671 Vanilla planifolia HOM05D002494 ORTHO05D002673 2.0e-29 134.8 197 41.6
Zm00001eb302530 Zea mays HOM05D002494 ORTHO05D002673 2.3e-28 131.3 172 43.0
Atru.chr4.2699 Acer truncatum HOM05D002494 ORTHO05D002673 5.5e-27 126.7 160 45.0
CBR_g52314 Chara braunii HOM05D002494 ORTHO05D002673 7.3e-19 99.8 361 23.0
Zm00001eb160540 Zea mays HOM05D002494 ORTHO05D002673 2.6e-16 91.3 103 40.8
Zm00001eb302540 Zea mays HOM05D002494 ORTHO05D002673 4.4e-16 90.5 103 40.8
Zm00001eb094450 Zea mays HOM05D002494 ORTHO05D002673 1.3e-12 79.0 88 43.2
Os07g0646000 Oryza sativa ssp. japonica HOM05D002494 ORTHO05D002673 1.7e-12 78.6 201 31.8
BolC5t34753H Brassica oleracea HOM05D002494 ORTHO05D002673 2.0e-08 65.1 66 45.5
Zm00001eb171280 Zea mays HOM05D002494 ORTHO05D002673 2.6e-08 64.7 75 38.7
Zm00001eb094440 Zea mays HOM05D002494 ORTHO05D002673 1.1e-06 59.3 81 40.7
Zm00001eb329300 Zea mays HOM05D002494 ORTHO05D002673 1.1e-06 59.3 63 39.7
SMO356G0469 Selaginella moellendorffii HOM05D015318 ORTHO05D037550 9.2e-06 56.2 118 28.8


User provided reference genes

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