Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0047196 Camellia sinensis var. sinensis HOM05D005579 ORTHO05D006775 0.0e+00 2268.0 1136 100.0
CSS0017636 Camellia sinensis var. sinensis HOM05D005579 ORTHO05D006775 0.0e+00 2235.7 1141 98.5
Dinv28443 Davidia involucrata HOM05D005579 ORTHO05D006775 0.0e+00 1394.8 1190 63.7
Actinidia32860 Actinidia chinensis HOM05D005579 ORTHO05D006775 0.0e+00 1261.1 1101 62.6
QL09p014220 Quercus lobata HOM05D005579 ORTHO05D006775 0.0e+00 1112.8 1181 52.9
GSVIVG01028977001 Vitis vinifera HOM05D005579 ORTHO05D006775 0.0e+00 1100.9 1297 50.3
Cfa008319 Carpinus fangiana HOM05D005579 ORTHO05D006775 0.0e+00 1094.3 1181 53.0
TAR367G0001 Trochodendron aralioides HOM05D005579 ORTHO05D006775 0.0e+00 1093.6 1204 51.7
CiPaw.04G071000 Carya illinoinensis HOM05D005579 ORTHO05D006775 1.5e-305 1053.1 1167 51.3
Ciclev10006492m.g Citrus clementina HOM05D005579 ORTHO05D006775 1.8e-287 993.0 1167 49.1
Duzib068G1336 Durio zibethinus HOM05D005579 ORTHO05D006775 8.8e-282 974.2 1190 48.7
Rhsim03G0180800 Rhododendron simsii HOM05D005579 ORTHO05D006775 2.3e-277 959.5 1177 49.6
Cc02_g02990 Coffea canephora HOM05D005579 ORTHO05D006775 5.4e-263 911.8 1191 46.3
Nn6g33500 Nelumbo nucifera HOM05D005579 ORTHO05D006775 2.0e-262 909.8 1173 47.2
Peaxi162Scf00444g00841 Petunia axillaris HOM05D005579 ORTHO05D006775 3.5e-262 909.1 1213 45.5
Gohir.D12G259200 Gossypium hirsutum HOM05D005579 ORTHO05D006775 1.2e-257 894.0 1100 48.3
Nitab4.5_0009681g0030 Nicotiana tabacum HOM05D005579 ORTHO05D006775 2.2e-256 889.8 1194 45.6
Sopen03g004630 Solanum pennellii HOM05D005579 ORTHO05D006775 7.1e-255 884.8 1199 45.8
Nitab4.5_0000716g0010 Nicotiana tabacum HOM05D005579 ORTHO05D006775 9.2e-255 884.4 1195 45.4
Solyc03g025820.3 Solanum lycopersicum HOM05D005579 ORTHO05D006775 9.2e-255 884.4 1195 45.5
Hma1.2p1_0270F.1_g108020 Hydrangea macrophylla HOM05D005579 ORTHO05D006775 1.1e-247 860.9 822 59.5
Gorai.008G277600 Gossypium raimondii HOM05D005579 ORTHO05D006775 3.2e-247 859.4 1072 48.2
TWI23G0169 Tripterygium wilfordii HOM05D005579 ORTHO05D006775 7.1e-247 858.2 1185 45.4
CAN.G490.30 Capsicum annuum HOM05D005579 ORTHO05D006775 1.6e-243 847.0 1195 43.4
COL.COLO4_14309 Corchorus olitorius HOM05D005579 ORTHO05D006775 2.9e-240 836.3 1183 44.0
Cpa.g.sc107.52 Carica papaya HOM05D005579 ORTHO05D006775 2.3e-237 826.6 1178 44.8
Gohir.A12G257850 Gossypium hirsutum HOM05D005579 ORTHO05D006775 4.8e-235 818.9 1070 46.7
Sed0022815 Sechium edule HOM05D005579 ORTHO05D006775 1.4e-231 807.4 1165 42.7
Sc13g0008650 Simmondsia chinensis HOM05D005579 ORTHO05D006775 5.6e-228 795.4 1166 43.7
Lj2g0003134 Lotus japonicus HOM05D005579 ORTHO05D006775 8.1e-227 791.6 1176 43.3
Thecc.03G176600 Theobroma cacao HOM05D005579 ORTHO05D006775 4.5e-225 785.8 1171 42.8
Glyma.09G139400 Glycine max HOM05D005579 ORTHO05D006775 7.1e-223 778.5 1158 43.3
Phvul.004G117000 Phaseolus vulgaris HOM05D005579 ORTHO05D006775 7.1e-223 778.5 1183 42.6
DCAR_018198 Daucus carota HOM05D005579 ORTHO05D006775 2.3e-221 773.5 1194 42.1
PGR142G3926 Punica granatum HOM05D005579 ORTHO05D006775 3.0e-221 773.1 1180 41.9
ClCG09G012930 Citrullus lanatus HOM05D005579 ORTHO05D006775 4.3e-220 769.2 1190 41.8
CsaV3_3G049940 Cucumis sativus L. HOM05D005579 ORTHO05D006775 2.0e-217 760.4 1172 41.6
TPR.G10740 Trifolium pratense HOM05D005579 ORTHO05D006775 4.5e-217 759.2 1158 41.7
VMungo0464G1636 Vigna mungo HOM05D005579 ORTHO05D006775 1.7e-216 757.3 1156 43.0
Psat0s2227g0080 Pisum sativum HOM05D005579 ORTHO05D006775 6.3e-211 738.8 1158 41.5
EL10Ac3g05643 Beta vulgaris HOM05D005579 ORTHO05D006775 1.4e-207 727.6 1270 39.0
Haze_13712 Corylus avellana HOM05D005579 ORTHO05D006775 1.4e-202 711.1 741 55.5
Medtr6g045357 Medicago truncatula HOM05D005579 ORTHO05D006775 5.3e-202 709.1 1138 41.0
AL8G26680 Arabidopsis lyrata HOM05D005579 ORTHO05D006775 4.6e-198 696.0 1181 40.2
Atru.chr1.458 Acer truncatum HOM05D005579 ORTHO05D006775 5.1e-197 692.6 781 52.4
Thhalv10015364m.g Eutrema salsugineum HOM05D005579 ORTHO05D006775 1.1e-196 691.4 1188 40.8
CARHR265270 Cardamine hirsuta HOM05D005579 ORTHO05D006775 3.3e-196 689.9 1156 40.7
Sp6g14550 Schrenkiella parvula HOM05D005579 ORTHO05D006775 2.4e-194 683.7 1183 40.0
Ah.07g207210 Amaranthus hybridus HOM05D005579 ORTHO05D006775 4.1e-194 682.9 1091 40.5
AL271U10020 Arabidopsis lyrata HOM05D005579 ORTHO05D006775 4.5e-193 679.5 1187 39.8
Prupe.2G294300 Prunus persica HOM05D005579 ORTHO05D006775 5.9e-193 679.1 736 53.4
AT5G52290 Arabidopsis thaliana HOM05D005579 ORTHO05D006775 5.0e-192 676.0 1184 39.9
Carub.0008s1239 Capsella rubella HOM05D005579 ORTHO05D006775 1.6e-190 671.0 1127 40.6
MELO3C003322.2 Cucumis melo HOM05D005579 ORTHO05D006775 1.0e-189 668.3 1177 39.6
THA.LOC104800252 Tarenaya hassleriana HOM05D005579 ORTHO05D006775 3.1e-186 656.8 1185 37.7
FvH4_7g29470 Fragaria vesca HOM05D005579 ORTHO05D006775 7.7e-185 652.1 745 52.1
Potri.012G141100 Populus trichocarpa HOM05D005579 ORTHO05D006775 1.0e-184 651.7 759 52.0
RcHm_v2.0_Chr1g0377251 Rosa chinensis HOM05D005579 ORTHO05D006775 2.1e-182 644.0 719 52.0
BcaB01g04199 Brassica carinata HOM05D005579 ORTHO05D006775 1.0e-181 641.7 1127 39.9
Aa31LG3G8710 Aethionema arabicum HOM05D005579 ORTHO05D006775 5.2e-181 639.4 1178 38.5
C03p18410 Brassica napus HOM05D005579 ORTHO05D006775 6.7e-181 639.0 1157 39.0
BcaC01g06176 Brassica carinata HOM05D005579 ORTHO05D006775 3.7e-179 633.3 1149 38.9
A03p15740 Brassica napus HOM05D005579 ORTHO05D006775 4.8e-179 632.9 1153 38.8
FAN06G0670 Fragaria x ananassa HOM05D005579 ORTHO05D006775 6.3e-179 632.5 765 50.3
FAN01G1040 Fragaria x ananassa HOM05D005579 ORTHO05D006775 4.1e-178 629.8 734 51.1
Sabra12G0106200 Salix brachista HOM05D005579 ORTHO05D006775 2.0e-177 627.5 782 49.4
MD07G1268700 Malus domestica HOM05D005579 ORTHO05D006775 3.8e-176 623.2 739 50.7
MBI17_g46332_MAGBIO Magnolia biondii HOM05D005579 ORTHO05D006775 1.0e-173 615.1 847 43.4
FAN03G0333 Fragaria x ananassa HOM05D005579 ORTHO05D006775 6.8e-173 612.5 707 52.6
BraA03t10864Z Brassica rapa HOM05D005579 ORTHO05D006775 8.8e-173 612.1 1217 36.7
BolC3t14238H Brassica oleracea HOM05D005579 ORTHO05D006775 1.2e-172 611.7 1219 36.6
MBI17_g39341_MAGBIO Magnolia biondii HOM05D005579 ORTHO05D006775 1.2e-172 611.7 1004 40.5
FAN06G0715 Fragaria x ananassa HOM05D005579 ORTHO05D006775 8.3e-171 605.5 681 52.0
FAN03G0790 Fragaria x ananassa HOM05D005579 ORTHO05D006775 2.4e-170 604.0 720 51.1
Manes.06G147100 Manihot esculenta HOM05D005579 ORTHO05D006775 2.5e-167 594.0 736 47.6
CANSAT21G2370 Cannabis sativa HOM05D005579 ORTHO05D006775 1.7e-160 571.2 728 49.2
Migut.F00340 Erythranthe guttata HOM05D005579 ORTHO05D006775 2.0e-156 557.8 745 46.4
PGSC0003DMG400014341 Solanum tuberosum HOM05D005579 ORTHO05D006775 5.0e-152 543.1 686 47.5
SGA_v2.0_scaffold60G21038 Striga asiatica HOM05D005579 ORTHO05D006775 1.4e-149 535.0 745 45.8
Oeu056255.1 Olea europaea HOM05D005579 ORTHO05D006775 5.8e-148 529.6 590 51.0
ECA232G1470 Erigeron canadensis HOM05D005579 ORTHO05D006775 6.0e-145 519.6 701 47.8
SalBow4G1821 Salvia bowleyana HOM05D005579 ORTHO05D006775 1.1e-143 515.4 779 43.5
SalBow4G2278 Salvia bowleyana HOM05D005579 ORTHO05D006775 1.1e-143 515.4 779 43.5
MD01G1200800 Malus domestica HOM05D005579 ORTHO05D006775 3.3e-143 513.8 726 44.4
PSO063G6446 Papaver somniferum HOM05D005579 ORTHO05D006775 3.1e-141 507.3 683 44.8
Eucgr.L01677 Eucalyptus grandis HOM05D005579 ORTHO05D006775 6.8e-141 506.1 638 46.9
PSO782G1268 Papaver somniferum HOM05D005579 ORTHO05D006775 3.5e-137 493.8 683 44.8
HanXRQChr15g0495541 Helianthus annuus HOM05D005579 ORTHO05D006775 3.0e-136 490.7 673 48.0
Lsat_1_v5_gn_9_55980 Lactuca sativa HOM05D005579 ORTHO05D006775 2.5e-135 487.6 671 46.6
AUR62021193 Chenopodium quinoa HOM05D005579 ORTHO05D006775 7.1e-130 469.5 763 42.1
Lalb_Chr19g0130861 Lupinus albus HOM05D005579 ORTHO05D006775 1.6e-126 458.4 769 42.4
AUR62015985 Chenopodium quinoa HOM05D005579 ORTHO05D006775 2.1e-126 458.0 745 40.9
Os02g0642600 Oryza sativa ssp. japonica HOM05D005579 ORTHO05D006775 1.7e-123 448.4 1190 30.5
arahy.Tifrunner.gnm1.ann1.TEHT7Q Arachis hypogaea HOM05D005579 ORTHO05D006775 3.0e-120 437.6 661 45.1
Zm00001eb248620 Zea mays HOM05D005579 ORTHO05D006775 2.4e-117 427.9 1268 29.7
arahy.Tifrunner.gnm1.ann1.Q0IWYL Arachis hypogaea HOM05D005579 ORTHO05D006775 1.2e-116 425.6 656 44.7
HPP92_008526 Vanilla planifolia HOM05D005579 ORTHO05D006775 7.1e-114 416.4 716 37.8
ATR0680G156 Amborella trichopoda HOM05D005579 ORTHO05D006775 6.9e-109 399.8 803 35.7
FAN10G2011 Fragaria x ananassa HOM05D005579 ORTHO05D006775 7.6e-108 396.4 330 64.2
FAN10G0535 Fragaria x ananassa HOM05D005579 ORTHO05D006775 1.2e-97 362.5 502 46.4
SHI39775 Sapria himalayana HOM05D005579 ORTHO05D006775 6.7e-96 356.7 722 37.4
Haze_13711 Corylus avellana HOM05D005579 ORTHO05D006775 4.5e-84 317.4 365 46.8
unitig_37.g12526 Utricularia gibba HOM05D005579 ORTHO05D006775 3.3e-71 274.6 606 36.6
Hund11748 Selenicereus undatus HOM05D005579 ORTHO05D006775 1.6e-65 255.8 503 37.6
CDE08G0179 Ceratophyllum demersum HOM05D005579 ORTHO05D006775 6.8e-56 223.8 591 32.7
Actinidia34112 Actinidia chinensis HOM05D005579 ORTHO05D006775 9.8e-55 219.9 164 72.6
Mapoly0013s0198 Marchantia polymorpha HOM05D005579 ORTHO05D006775 3.3e-50 204.9 533 29.6
Hund11747 Selenicereus undatus HOM05D005579 ORTHO05D006775 2.0e-44 185.7 234 45.3
SMO364G0179 Selaginella moellendorffii HOM05D005579 ORTHO05D006775 1.1e-42 179.9 247 42.1
MBI17_g46331_MAGBIO Magnolia biondii HOM05D005579 ORTHO05D006775 1.0e-40 173.3 282 40.1
Pp3c13_14750 Physcomitrium patens HOM05D005579 ORTHO05D006775 4.7e-33 147.9 225 37.8
Pp3c21_13440 Physcomitrium patens HOM05D005579 ORTHO05D006775 8.3e-30 137.1 228 31.6
CDE08G1090 Ceratophyllum demersum HOM05D005579 ORTHO05D006775 2.7e-28 132.1 103 62.1
SEGI_30883 Sequoiadendron giganteum HOM05D005579 ORTHO05D006775 3.0e-19 102.1 295 26.4
Oeu024225.1 Olea europaea HOM05D002251 ORTHO05D006775 1.3e-11 76.6 317 29.0
CBR_g61457 Chara braunii HOM05D005579 ORTHO05D006775 5.1e-11 74.7 145 31.7
TPR.G17624 Trifolium pratense HOM05D005579 ORTHO05D006775 1.9e-10 72.8 146 35.6
TPR.G31959 Trifolium pratense HOM05D061576 ORTHO05D006775 9.0e-08 63.9 143 30.8
SalBow1G5008 Salvia bowleyana HOM05D045082 ORTHO05D006775 8.4e-06 57.4 36 72.2
SalBow1G5207 Salvia bowleyana HOM05D045082 ORTHO05D006775 8.4e-06 57.4 36 72.2


User provided reference genes

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