Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0046024 Camellia sinensis var. sinensis HOM05D005330 ORTHO05D006489 2.7e-64 248.4 120 100.0
vmacro15037 Vaccinium macrocarpon HOM05D005330 ORTHO05D006489 4.2e-49 198.0 118 77.1
GSVIVG01016752001 Vitis vinifera HOM05D005330 ORTHO05D006489 1.6e-48 196.1 101 88.1
Dinv20432 Davidia involucrata HOM05D005330 ORTHO05D006489 3.0e-47 191.8 118 77.1
DCAR_022693 Daucus carota HOM05D005330 ORTHO05D006489 8.8e-47 190.3 118 75.4
QL05p004250 Quercus lobata HOM05D005330 ORTHO05D006489 2.5e-46 188.7 108 77.8
Glyma.16G008300 Glycine max HOM05D005330 ORTHO05D006489 3.3e-46 188.3 118 71.2
Nn6g34611 Nelumbo nucifera HOM05D005330 ORTHO05D006489 3.3e-46 188.3 118 72.9
Cc04_g01320 Coffea canephora HOM05D005330 ORTHO05D006489 9.7e-46 186.8 118 73.7
Actinidia32189 Actinidia chinensis HOM05D005330 ORTHO05D006489 1.3e-45 186.4 118 78.0
Rhsim08G0239400 Rhododendron simsii HOM05D005330 ORTHO05D006489 1.3e-45 186.4 100 84.0
Thecc.06G120800 Theobroma cacao HOM05D005330 ORTHO05D006489 1.3e-45 186.4 98 86.7
TWI79G1442 Tripterygium wilfordii HOM05D005330 ORTHO05D006489 3.7e-45 184.9 101 81.2
Manes.11G019800 Manihot esculenta HOM05D005330 ORTHO05D006489 6.3e-45 184.1 108 78.7
TAR624G1001 Trochodendron aralioides HOM05D005330 ORTHO05D006489 8.2e-45 183.7 99 82.8
Lj5A36G79 Lonicera japonica HOM05D005330 ORTHO05D006489 1.1e-44 183.3 98 85.7
TWI31G1192 Tripterygium wilfordii HOM05D005330 ORTHO05D006489 1.8e-44 182.6 101 80.2
arahy.Tifrunner.gnm1.ann1.K577WU Arachis hypogaea HOM05D005330 ORTHO05D006489 2.4e-44 182.2 101 78.2
arahy.Tifrunner.gnm1.ann1.RX87J0 Arachis hypogaea HOM05D005330 ORTHO05D006489 2.4e-44 182.2 101 78.2
Cpa.g.sc25.125 Carica papaya HOM05D005330 ORTHO05D006489 2.4e-44 182.2 99 83.8
Gohir.A10G053500 Gossypium hirsutum HOM05D005330 ORTHO05D006489 2.4e-44 182.2 101 79.2
Hma1.2p1_0686F.1_g203410 Hydrangea macrophylla HOM05D005330 ORTHO05D006489 2.4e-44 182.2 119 71.4
Glyma.18G149800 Glycine max HOM05D005330 ORTHO05D006489 3.1e-44 181.8 108 76.9
PGR119G1300 Punica granatum HOM05D005330 ORTHO05D006489 3.1e-44 181.8 98 83.7
Lalb_Chr04g0263541 Lupinus albus HOM05D005330 ORTHO05D006489 4.1e-44 181.4 108 75.0
Glyma.03G080300 Glycine max HOM05D005330 ORTHO05D006489 5.3e-44 181.0 108 75.9
Cfa003530 Carpinus fangiana HOM05D005330 ORTHO05D006489 6.9e-44 180.6 108 76.9
Gohir.D10G055300 Gossypium hirsutum HOM05D005330 ORTHO05D006489 6.9e-44 180.6 101 78.2
Gorai.011G059000 Gossypium raimondii HOM05D005330 ORTHO05D006489 6.9e-44 180.6 101 78.2
Lsat_1_v5_gn_5_136241 Lactuca sativa HOM05D005330 ORTHO05D006489 6.9e-44 180.6 118 69.5
Haze_16035 Corylus avellana HOM05D005330 ORTHO05D006489 1.5e-43 179.5 99 82.8
Sabra03G0038500 Salix brachista HOM05D005330 ORTHO05D006489 2.6e-43 178.7 118 71.2
Eucgr.F04419 Eucalyptus grandis HOM05D005330 ORTHO05D006489 3.4e-43 178.3 118 67.8
HanXRQChr12g0360301 Helianthus annuus HOM05D005330 ORTHO05D006489 3.4e-43 178.3 118 69.5
HanXRQChr12g0360351 Helianthus annuus HOM05D005330 ORTHO05D006489 3.4e-43 178.3 118 69.5
Lj3g0015373 Lotus japonicus HOM05D005330 ORTHO05D006489 3.4e-43 178.3 118 66.9
Potri.003G065500 Populus trichocarpa HOM05D005330 ORTHO05D006489 3.4e-43 178.3 118 72.0
Nitab4.5_0000189g0150 Nicotiana tabacum HOM05D005330 ORTHO05D006489 4.5e-43 177.9 108 75.0
Sc10g0007910 Simmondsia chinensis HOM05D005330 ORTHO05D006489 7.7e-43 177.2 108 71.3
Duzib160G0528 Durio zibethinus HOM05D005330 ORTHO05D006489 1.0e-42 176.8 101 79.2
Nitab4.5_0001199g0030 Nicotiana tabacum HOM05D005330 ORTHO05D006489 1.3e-42 176.4 108 74.1
Oeu015485.2 Olea europaea HOM05D005330 ORTHO05D006489 1.7e-42 176.0 118 72.0
Phvul.010G129300 Phaseolus vulgaris HOM05D005330 ORTHO05D006489 1.7e-42 176.0 108 72.2
Hund05737 Selenicereus undatus HOM05D005330 ORTHO05D006489 1.7e-42 176.0 118 65.3
VMungo0331G1542 Vigna mungo HOM05D005330 ORTHO05D006489 5.0e-42 174.5 119 67.2
Hma1.2p1_0291F.1_g115070 Hydrangea macrophylla HOM05D005330 ORTHO05D006489 1.1e-41 173.3 101 80.2
CiPaw.01G218300 Carya illinoinensis HOM05D005330 ORTHO05D006489 2.5e-41 172.2 108 75.9
PGSC0003DMG400014100 Solanum tuberosum HOM05D005330 ORTHO05D006489 2.5e-41 172.2 108 72.2
SGA_v2.0_scaffold71G23853 Striga asiatica HOM05D005330 ORTHO05D006489 2.5e-41 172.2 119 68.9
Potri.001G168700 Populus trichocarpa HOM05D005330 ORTHO05D006489 3.2e-41 171.8 109 75.2
Prupe.3G040200 Prunus persica HOM05D005330 ORTHO05D006489 3.2e-41 171.8 102 73.5
Sed0005660 Sechium edule HOM05D005330 ORTHO05D006489 5.5e-41 171.0 118 66.9
EL10Ac7g16412 Beta vulgaris HOM05D005330 ORTHO05D006489 9.4e-41 170.2 118 63.6
Peaxi162Scf00177g00417 Petunia axillaris HOM05D005330 ORTHO05D006489 9.4e-41 170.2 108 73.1
Ca_23387_v3 Cicer arietinum L. HOM05D005330 ORTHO05D006489 1.2e-40 169.9 101 74.3
TPR.G36682 Trifolium pratense HOM05D005330 ORTHO05D006489 1.2e-40 169.9 118 62.7
Medtr8g020850 Medicago truncatula HOM05D005330 ORTHO05D006489 1.6e-40 169.5 118 62.7
Solyc12g049330.2 Solanum lycopersicum HOM05D005330 ORTHO05D006489 2.1e-40 169.1 108 71.3
Sopen12g023810 Solanum pennellii HOM05D005330 ORTHO05D006489 2.1e-40 169.1 108 71.3
Atru.chr1.3994 Acer truncatum HOM05D005330 ORTHO05D006489 3.6e-40 168.3 101 73.3
Atru.chr1.3993 Acer truncatum HOM05D005330 ORTHO05D006489 7.9e-40 167.2 101 71.3
CAN.G1080.1 Capsicum annuum HOM05D005330 ORTHO05D006489 7.9e-40 167.2 108 70.4
CAN.G1455.4 Capsicum annuum HOM05D005330 ORTHO05D006489 7.9e-40 167.2 108 70.4
ClCG09G000970 Citrullus lanatus HOM05D005330 ORTHO05D006489 1.0e-39 166.8 108 70.4
SGA_v2.0_scaffold122G33335 Striga asiatica HOM05D005330 ORTHO05D006489 1.8e-39 166.0 102 75.5
SalBow6G0331 Salvia bowleyana HOM05D005330 ORTHO05D006489 2.3e-39 165.6 99 76.8
SalBow6G0719 Salvia bowleyana HOM05D005330 ORTHO05D006489 2.3e-39 165.6 99 76.8
Hund18689 Selenicereus undatus HOM05D005330 ORTHO05D006489 3.9e-39 164.9 118 63.6
TAR624G0147 Trochodendron aralioides HOM05D005330 ORTHO05D006489 8.8e-39 163.7 100 76.0
Ah.08g216810 Amaranthus hybridus HOM05D005330 ORTHO05D006489 1.1e-38 163.3 101 68.3
Migut.I01076 Erythranthe guttata HOM05D005330 ORTHO05D006489 3.3e-38 161.8 101 74.3
Ciclev10025803m.g Citrus clementina HOM05D005330 ORTHO05D006489 5.7e-38 161.0 118 64.4
AUR62009886 Chenopodium quinoa HOM05D005330 ORTHO05D006489 7.4e-38 160.6 98 70.4
MELO3C024354.2 Cucumis melo HOM05D005330 ORTHO05D006489 7.4e-38 160.6 108 65.7
CsaV3_7G034470 Cucumis sativus L. HOM05D005330 ORTHO05D006489 7.4e-38 160.6 108 65.7
Psat0s741g0240 Pisum sativum HOM05D005330 ORTHO05D006489 9.7e-38 160.2 101 72.3
Sed0026793 Sechium edule HOM05D005330 ORTHO05D006489 2.2e-37 159.1 98 71.4
AUR62001479 Chenopodium quinoa HOM05D005330 ORTHO05D006489 4.8e-37 157.9 98 69.4
THA.LOC104810366 Tarenaya hassleriana HOM05D005330 ORTHO05D006489 6.3e-37 157.5 109 65.1
A08p01180 Brassica napus HOM05D005330 ORTHO05D006489 8.2e-37 157.1 106 64.2
ECA234G4612 Erigeron canadensis HOM05D005330 ORTHO05D006489 1.1e-36 156.8 118 61.0
MD09G1182800 Malus domestica HOM05D005330 ORTHO05D006489 1.1e-36 156.8 120 60.0
BraA08t32169Z Brassica rapa HOM05D005330 ORTHO05D006489 2.4e-36 155.6 106 64.2
Lsat_1_v5_gn_5_136301 Lactuca sativa HOM05D005330 ORTHO05D006489 7.0e-36 154.1 105 70.5
A06p00510 Brassica napus HOM05D005330 ORTHO05D006489 1.5e-35 152.9 106 63.2
BraA06t23266Z Brassica rapa HOM05D005330 ORTHO05D006489 1.5e-35 152.9 106 63.2
Sp1g40600 Schrenkiella parvula HOM05D005330 ORTHO05D006489 2.0e-35 152.5 106 64.2
BcaC01g01438 Brassica carinata HOM05D005330 ORTHO05D006489 3.5e-35 151.8 106 62.3
C03p92030 Brassica napus HOM05D005330 ORTHO05D006489 3.5e-35 151.8 106 62.3
BolC3t21521H Brassica oleracea HOM05D005330 ORTHO05D006489 3.5e-35 151.8 106 62.3
CARHR044500 Cardamine hirsuta HOM05D005330 ORTHO05D006489 3.5e-35 151.8 106 65.1
Thhalv10011564m.g Eutrema salsugineum HOM05D005330 ORTHO05D006489 3.5e-35 151.8 111 59.5
ATR0598G333 Amborella trichopoda HOM05D005330 ORTHO05D006489 4.5e-35 151.4 99 68.7
MD09G1182600 Malus domestica HOM05D005330 ORTHO05D006489 4.5e-35 151.4 102 63.7
Aa31LG10G1260 Aethionema arabicum HOM05D005330 ORTHO05D006489 1.0e-34 150.2 106 62.3
BcaC08g43595 Brassica carinata HOM05D005330 ORTHO05D006489 1.0e-34 150.2 106 62.3
C06p09930 Brassica napus HOM05D005330 ORTHO05D006489 1.0e-34 150.2 106 62.3
BolC6t36066H Brassica oleracea HOM05D005330 ORTHO05D006489 1.0e-34 150.2 106 62.3
BcaB04g17020 Brassica carinata HOM05D005330 ORTHO05D006489 1.7e-34 149.4 107 62.6
BcaB07g33256 Brassica carinata HOM05D005330 ORTHO05D006489 2.9e-34 148.7 107 63.6
HanXRQChr12g0360331 Helianthus annuus HOM05D005330 ORTHO05D006489 2.9e-34 148.7 99 68.7
DCAR_016124 Daucus carota HOM05D005330 ORTHO05D006489 5.0e-34 147.9 98 68.4
RcHm_v2.0_Chr2g0145651 Rosa chinensis HOM05D005330 ORTHO05D006489 8.5e-34 147.1 108 59.3
PSO724G1321 Papaver somniferum HOM05D005330 ORTHO05D006489 1.9e-33 146.0 120 58.3
Aqoxy2G00145 Aquilegia oxysepala HOM05D005330 ORTHO05D006489 4.2e-33 144.8 104 61.5
PSO135G0621 Papaver somniferum HOM05D005330 ORTHO05D006489 7.2e-33 144.1 120 57.5
HPP92_013292 Vanilla planifolia HOM05D005330 ORTHO05D006489 7.2e-33 144.1 98 65.3
MD09G1182700 Malus domestica HOM05D005330 ORTHO05D006489 1.2e-32 143.3 108 55.6
PSO135G0922 Papaver somniferum HOM05D005330 ORTHO05D006489 1.2e-32 143.3 100 65.0
PSO135G0120 Papaver somniferum HOM05D005330 ORTHO05D006489 2.3e-31 139.0 102 62.7
Carub.0001s4339 Capsella rubella HOM05D005330 ORTHO05D006489 3.9e-31 138.3 106 63.2
AL1G62870 Arabidopsis lyrata HOM05D005330 ORTHO05D006489 1.1e-30 136.7 108 62.0
FvH4_6g34790 Fragaria vesca HOM05D005330 ORTHO05D006489 1.1e-30 136.7 118 50.8
FAN05G5341 Fragaria x ananassa HOM05D005330 ORTHO05D006489 1.1e-30 136.7 118 50.8
SEGI_21309 Sequoiadendron giganteum HOM05D005330 ORTHO05D006489 8.2e-29 130.6 99 61.6
AT1G54150 Arabidopsis thaliana HOM05D005330 ORTHO05D006489 1.8e-28 129.4 108 59.3
AagrBONN_evm.TU.Sc2ySwM_228.1646 Anthoceros agrestis HOM05D005330 ORTHO05D006489 1.6e-27 126.3 108 59.3
CDE05G1829 Ceratophyllum demersum HOM05D005330 ORTHO05D006489 2.5e-25 119.0 118 50.0
COL.COLO4_30752 Corchorus olitorius HOM05D005330 ORTHO05D006489 3.2e-25 118.6 100 59.0
Pp3c13_6970 Physcomitrium patens HOM05D005330 ORTHO05D006489 5.5e-25 117.9 105 57.1
Pp3c16_12380 Physcomitrium patens HOM05D005330 ORTHO05D006489 7.2e-25 117.5 105 54.3
Mapoly0002s0144 Marchantia polymorpha HOM05D005330 ORTHO05D006489 1.2e-24 116.7 105 59.0
PSO724G1224 Papaver somniferum HOM05D005330 ORTHO05D006489 3.6e-24 115.2 78 65.4
MD02G1089500 Malus domestica HOM05D005330 ORTHO05D006489 6.1e-24 114.4 107 53.3
SMO118G0169 Selaginella moellendorffii HOM05D005330 ORTHO05D006489 1.4e-23 113.2 99 51.5
Zm00001eb401910 Zea mays HOM05D005330 ORTHO05D006489 5.7e-22 107.8 100 48.0
Os03g0177300 Oryza sativa ssp. japonica HOM05D005330 ORTHO05D006489 1.4e-20 103.2 118 40.7
Dinv20433 Davidia involucrata HOM05D005330 ORTHO05D006489 1.8e-20 102.8 102 54.9
Aqoxy3G00178 Aquilegia oxysepala HOM05D005330 ORTHO05D006489 1.1e-17 93.6 102 47.1
Aqoxy3G00203 Aquilegia oxysepala HOM05D005330 ORTHO05D006489 4.0e-15 85.1 101 47.5
CBR_g17139 Chara braunii HOM05D005330 ORTHO05D006489 3.1e-12 75.5 114 40.4
RhsimUnG0257000 Rhododendron simsii HOM05D002922 ORTHO05D000401 8.6e-10 67.4 41 78.0
Lsat_1_v5_gn_8_134000 Lactuca sativa HOM05D005330 ORTHO05D006489 4.4e-06 55.1 37 64.9


User provided reference genes

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