Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0044658 Camellia sinensis var. sinensis HOM05D000246 ORTHO05D007179 2.9e-79 298.5 152 100.0
CSS0043712 Camellia sinensis var. sinensis HOM05D000246 ORTHO05D007179 2.1e-66 255.8 137 97.1
vmacro04965 Vaccinium macrocarpon HOM05D000246 ORTHO05D007179 3.7e-50 201.8 130 74.6
Nitab4.5_0002344g0100 Nicotiana tabacum HOM05D000246 ORTHO05D007179 8.8e-44 180.6 130 66.9
Lj5A431G15 Lonicera japonica HOM05D000246 ORTHO05D007179 1.5e-43 179.9 130 69.2
Nitab4.5_0008329g0030 Nicotiana tabacum HOM05D000246 ORTHO05D007179 2.0e-43 179.5 130 66.2
Peaxi162Scf00037g00932 Petunia axillaris HOM05D000246 ORTHO05D007179 9.7e-43 177.2 130 66.2
MBI19_g18874_MAGBIO Magnolia biondii HOM05D000246 ORTHO05D007179 1.3e-42 176.8 131 64.9
TPR.G6096 Trifolium pratense HOM05D000246 ORTHO05D007179 1.3e-42 176.8 151 58.9
CAN.G1652.4 Capsicum annuum HOM05D000246 ORTHO05D007179 1.4e-41 173.3 129 63.6
Sopen01g043000 Solanum pennellii HOM05D000246 ORTHO05D007179 3.1e-41 172.2 129 64.3
TAR633G0108 Trochodendron aralioides HOM05D000246 ORTHO05D007179 7.0e-41 171.0 131 66.4
Psat6g150320 Pisum sativum HOM05D000246 ORTHO05D007179 1.6e-40 169.9 139 61.2
Lj5A421T62 Lonicera japonica HOM05D000246 ORTHO05D007179 3.5e-40 168.7 120 69.2
Ca_10124_v3 Cicer arietinum L. HOM05D000246 ORTHO05D007179 1.7e-39 166.4 136 61.0
arahy.Tifrunner.gnm1.ann1.JYY4I0 Arachis hypogaea HOM05D000246 ORTHO05D007179 2.2e-39 166.0 144 60.4
arahy.Tifrunner.gnm1.ann1.K95L4M Arachis hypogaea HOM05D000246 ORTHO05D007179 2.2e-39 166.0 144 60.4
Atru.chr2.19 Acer truncatum HOM05D000246 ORTHO05D007179 3.8e-39 165.2 142 59.9
ECA240G0991 Erigeron canadensis HOM05D000246 ORTHO05D007179 3.8e-39 165.2 133 57.9
PSO170G0679 Papaver somniferum HOM05D000246 ORTHO05D007179 6.5e-39 164.5 129 62.8
Cc00_g10440 Coffea canephora HOM05D000246 ORTHO05D007179 8.5e-39 164.1 129 59.7
Manes.08G118800 Manihot esculenta HOM05D000246 ORTHO05D007179 8.5e-39 164.1 133 63.9
Medtr1g083250 Medicago truncatula HOM05D000246 ORTHO05D007179 8.5e-39 164.1 138 63.8
Hund21703 Selenicereus undatus HOM05D000246 ORTHO05D007179 1.1e-38 163.7 141 58.2
Thecc.05G311900 Theobroma cacao HOM05D000246 ORTHO05D007179 1.5e-38 163.3 142 59.2
Migut.B01029 Erythranthe guttata HOM05D000246 ORTHO05D007179 2.5e-38 162.5 135 58.5
Sabra05G0031700 Salix brachista HOM05D000359 ORTHO05D007179 2.5e-38 162.5 141 58.2
CiPaw.08G162700 Carya illinoinensis HOM05D000246 ORTHO05D007179 5.5e-38 161.4 152 55.3
Haze_04155 Corylus avellana HOM05D000246 ORTHO05D007179 5.5e-38 161.4 154 54.5
TWI56G0873 Tripterygium wilfordii HOM05D000246 ORTHO05D007179 1.2e-37 160.2 143 58.7
arahy.Tifrunner.gnm1.ann1.G0LK44 Arachis hypogaea HOM05D000246 ORTHO05D007179 1.6e-37 159.8 149 58.4
Lalb_Chr21g0310621 Lupinus albus HOM05D000246 ORTHO05D007179 2.1e-37 159.5 144 59.0
Duzib177G0836 Durio zibethinus HOM05D000246 ORTHO05D007179 3.6e-37 158.7 141 55.3
Glyma.20G236000 Glycine max HOM05D000246 ORTHO05D007179 3.6e-37 158.7 139 57.6
PSO210G2254 Papaver somniferum HOM05D000246 ORTHO05D007179 3.6e-37 158.7 129 62.8
Lsat_1_v5_gn_9_123801 Lactuca sativa HOM05D000246 ORTHO05D007179 1.0e-36 157.1 135 60.0
Nn3g21421 Nelumbo nucifera HOM05D000246 ORTHO05D007179 1.0e-36 157.1 131 61.8
GSVIVG01031124001 Vitis vinifera HOM05D001472 ORTHO05D002655 1.0e-36 157.1 119 68.1
Aqoxy2G03005 Aquilegia oxysepala HOM05D000246 ORTHO05D007179 1.4e-36 156.8 138 58.7
Gorai.007G299200 Gossypium raimondii HOM05D000246 ORTHO05D007179 1.4e-36 156.8 139 54.7
PGR031G3950 Punica granatum HOM05D000246 ORTHO05D007179 1.4e-36 156.8 141 54.6
Gohir.D11G277100 Gossypium hirsutum HOM05D000246 ORTHO05D007179 2.3e-36 156.0 139 54.7
CANSAT54G2417 Cannabis sativa HOM05D000246 ORTHO05D007179 3.0e-36 155.6 145 55.9
Gohir.A11G267000 Gossypium hirsutum HOM05D000246 ORTHO05D007179 4.0e-36 155.2 139 54.0
Rhsim07G0187000 Rhododendron simsii HOM05D000246 ORTHO05D007179 4.0e-36 155.2 190 46.3
AUR62000778 Chenopodium quinoa HOM05D000246 ORTHO05D007179 5.2e-36 154.8 140 56.4
Phvul.007G196600 Phaseolus vulgaris HOM05D000246 ORTHO05D007179 6.7e-36 154.5 140 58.6
QL03p021621 Quercus lobata HOM05D000246 ORTHO05D007179 1.5e-35 153.3 148 61.5
QL03p021635 Quercus lobata HOM05D000246 ORTHO05D007179 1.5e-35 153.3 148 61.5
Cfa006619 Carpinus fangiana HOM05D000246 ORTHO05D007179 2.0e-35 152.9 107 68.2
Actinidia05681 Actinidia chinensis HOM05D000246 ORTHO05D007179 3.3e-35 152.1 88 76.1
FAN05G3600 Fragaria x ananassa HOM05D000246 ORTHO05D007179 4.4e-35 151.8 149 57.0
Potri.005G026400 Populus trichocarpa HOM05D000246 ORTHO05D007179 5.7e-35 151.4 135 63.7
Prupe.6G321800 Prunus persica HOM05D000246 ORTHO05D007179 7.5e-35 151.0 143 51.0
COL.COLO4_10505 Corchorus olitorius HOM05D000246 ORTHO05D007179 1.3e-34 150.2 143 58.0
EL10Ac4g09931 Beta vulgaris HOM05D000246 ORTHO05D007179 2.2e-34 149.4 140 55.7
FAN02G0914 Fragaria x ananassa HOM05D000246 ORTHO05D007179 4.8e-34 148.3 149 55.7
HanXRQChr03g0072511 Helianthus annuus HOM05D000246 ORTHO05D007179 6.3e-34 147.9 135 57.0
MD04G1201600 Malus domestica HOM05D000246 ORTHO05D007179 8.2e-34 147.5 143 50.3
ClCG02G015470 Citrullus lanatus HOM05D000246 ORTHO05D007179 1.1e-33 147.1 142 53.5
Ciclev10000234m.g Citrus clementina HOM05D000246 ORTHO05D007179 1.1e-33 147.1 141 53.2
RcHm_v2.0_Chr3g0455521 Rosa chinensis HOM05D000246 ORTHO05D007179 1.1e-33 147.1 146 56.8
AUR62005191 Chenopodium quinoa HOM05D000246 ORTHO05D007179 1.8e-33 146.4 140 55.7
Cpa.g.sc48.83 Carica papaya HOM05D000246 ORTHO05D007179 3.1e-33 145.6 107 66.4
Eucgr.L01168 Eucalyptus grandis HOM05D000246 ORTHO05D007179 4.1e-33 145.2 135 53.3
CsaV3_2G006600 Cucumis sativus L. HOM05D000246 ORTHO05D007179 7.0e-33 144.4 140 55.0
Lj5g0018456 Lotus japonicus HOM05D000246 ORTHO05D007179 7.0e-33 144.4 130 58.5
Sed0014533 Sechium edule HOM05D000246 ORTHO05D007179 2.7e-32 142.5 140 54.3
VMungo0720G1388 Vigna mungo HOM05D000246 ORTHO05D007179 3.5e-32 142.1 137 56.9
MELO3C004226.2 Cucumis melo HOM05D000246 ORTHO05D007179 4.5e-32 141.7 137 54.7
ATR0210G017 Amborella trichopoda HOM05D000246 ORTHO05D007179 5.0e-31 138.3 136 51.5
CDE01G0473 Ceratophyllum demersum HOM05D000246 ORTHO05D007179 5.0e-31 138.3 123 54.5
HPP92_010691 Vanilla planifolia HOM05D000246 ORTHO05D007179 6.5e-31 137.9 132 53.0
FAN14G0626 Fragaria x ananassa HOM05D000246 ORTHO05D007179 1.9e-30 136.3 108 58.3
Oeu012115.1 Olea europaea HOM05D000246 ORTHO05D007179 3.2e-30 135.6 100 63.0
FvH4_6g06440 Fragaria vesca HOM05D000246 ORTHO05D007179 4.2e-30 135.2 149 53.0
CARHR186200 Cardamine hirsuta HOM05D000246 ORTHO05D007179 6.1e-29 131.3 99 62.6
FvH4_6g06441 Fragaria vesca HOM05D000246 ORTHO05D007179 1.8e-28 129.8 143 46.9
Dinv40318 Davidia involucrata HOM05D000246 ORTHO05D007179 2.3e-28 129.4 101 64.4
AL6G39350 Arabidopsis lyrata HOM05D000246 ORTHO05D007179 3.0e-28 129.0 97 62.9
DCAR_003348 Daucus carota HOM05D000246 ORTHO05D007179 8.8e-28 127.5 162 46.9
AT5G27680 Arabidopsis thaliana HOM05D000246 ORTHO05D007179 1.5e-27 126.7 97 60.8
FAN05G4756 Fragaria x ananassa HOM05D000246 ORTHO05D007179 3.4e-27 125.6 147 47.6
Carub.0006s2490 Capsella rubella HOM05D000246 ORTHO05D007179 5.7e-27 124.8 97 59.8
Solyc01g099470.3 Solanum lycopersicum HOM05D000246 ORTHO05D007179 9.8e-27 124.0 98 61.2
Aa31LG11G9420 Aethionema arabicum HOM05D000246 ORTHO05D007179 1.1e-25 120.6 112 52.7
Thhalv10003644m.g Eutrema salsugineum HOM05D000246 ORTHO05D007179 2.4e-25 119.4 110 54.5
A06p37370 Brassica napus HOM05D000246 ORTHO05D007179 4.1e-25 118.6 107 54.2
C07p41090 Brassica napus HOM05D000246 ORTHO05D007179 7.0e-25 117.9 107 54.2
BolC7t44636H Brassica oleracea HOM05D000246 ORTHO05D007179 7.0e-25 117.9 107 54.2
BraA06t26661Z Brassica rapa HOM05D000246 ORTHO05D007179 2.7e-24 115.9 107 53.3
MBI19_g41249_MAGBIO Magnolia biondii HOM05D000246 ORTHO05D007179 2.9e-23 112.5 76 65.8
Zm00001eb354210 Zea mays HOM05D000246 ORTHO05D007179 7.2e-22 107.8 134 42.5
Aqoxy2G02800 Aquilegia oxysepala HOM05D000246 ORTHO05D007179 1.3e-18 97.1 69 66.7
SEGI_40367 Sequoiadendron giganteum HOM05D000246 ORTHO05D007179 1.3e-18 97.1 141 42.6
SHI18110 Sapria himalayana HOM05D000246 ORTHO05D007179 5.4e-17 91.7 71 59.2
Sp2g20840 Schrenkiella parvula HOM05D000246 ORTHO05D007179 5.0e-15 85.1 91 49.5
Pp3c20_2130 Physcomitrium patens HOM05D000246 ORTHO05D007179 2.1e-13 79.7 147 40.1
Eucgr.L01167 Eucalyptus grandis HOM05D000246 ORTHO05D007179 2.0e-11 73.2 58 51.7
Eucgr.F00584 Eucalyptus grandis HOM05D000246 ORTHO05D007179 1.3e-10 70.5 65 46.2
Solyc02g088430.1 Solanum lycopersicum HOM05D000246 ORTHO05D007179 4.6e-08 62.0 55 50.9
BcaNung04538 Brassica carinata HOM05D005214 ORTHO05D005861 2.5e-06 56.2 88 37.5
Solyc01g099460.3 Solanum lycopersicum HOM05D000246 ORTHO05D007179 7.3e-06 54.7 34 70.6


User provided reference genes

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