Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0044491 Camellia sinensis var. sinensis HOM05D003084 ORTHO05D003580 5.5e-142 507.7 266 100.0
CSS0001529 Camellia sinensis var. sinensis HOM05D003084 ORTHO05D003580 4.4e-123 444.9 270 88.5
Eucgr.I02637 Eucalyptus grandis HOM05D003084 ORTHO05D003580 2.2e-122 442.6 270 87.4
Hma1.2p1_0996F.1_g245870 Hydrangea macrophylla HOM05D003084 ORTHO05D003580 2.8e-122 442.2 270 87.8
Atru.chr2.3187 Acer truncatum HOM05D003084 ORTHO05D003580 3.7e-122 441.8 270 87.4
Atru.chr2.3199 Acer truncatum HOM05D003084 ORTHO05D003580 3.7e-122 441.8 270 87.4
ECA233G4363 Erigeron canadensis HOM05D003084 ORTHO05D003580 3.7e-122 441.8 270 87.4
HanXRQChr02g0058761 Helianthus annuus HOM05D003084 ORTHO05D003580 3.7e-122 441.8 270 87.4
Lsat_1_v5_gn_6_59920 Lactuca sativa HOM05D003084 ORTHO05D003580 3.7e-122 441.8 270 87.4
Manes.10G104400 Manihot esculenta HOM05D003084 ORTHO05D003580 3.7e-122 441.8 270 87.8
Atru.chr7.2125 Acer truncatum HOM05D003084 ORTHO05D003580 8.2e-122 440.7 270 87.0
DCAR_026599 Daucus carota HOM05D003084 ORTHO05D003580 8.2e-122 440.7 270 87.0
Dinv23897 Davidia involucrata HOM05D003084 ORTHO05D003580 8.2e-122 440.7 270 87.0
Dinv23905 Davidia involucrata HOM05D003084 ORTHO05D003580 8.2e-122 440.7 270 87.0
Oeu060755.1 Olea europaea HOM05D003084 ORTHO05D003580 8.2e-122 440.7 270 87.4
TWI23G0442 Tripterygium wilfordii HOM05D003084 ORTHO05D003580 8.2e-122 440.7 270 87.4
TAR629G3161 Trochodendron aralioides HOM05D003084 ORTHO05D003580 8.2e-122 440.7 270 87.4
TAR636G3251 Trochodendron aralioides HOM05D003084 ORTHO05D003580 8.2e-122 440.7 270 87.4
CANSAT01G3215 Cannabis sativa HOM05D003084 ORTHO05D003580 1.1e-121 440.3 270 87.0
Gohir.A12G015800 Gossypium hirsutum HOM05D003084 ORTHO05D003580 1.1e-121 440.3 270 87.4
Gohir.D12G016100 Gossypium hirsutum HOM05D003084 ORTHO05D003580 1.1e-121 440.3 270 87.4
Gorai.008G016300 Gossypium raimondii HOM05D003084 ORTHO05D003580 1.1e-121 440.3 270 87.4
Medtr2g009110 Medicago truncatula HOM05D003084 ORTHO05D003580 1.1e-121 440.3 270 87.0
Potri.001G310900 Populus trichocarpa HOM05D003084 ORTHO05D003580 1.1e-121 440.3 270 87.4
Sabra16G0196500 Salix brachista HOM05D003084 ORTHO05D003580 1.1e-121 440.3 270 87.4
Ciclev10010658m.g Citrus clementina HOM05D003084 ORTHO05D003580 1.4e-121 439.9 270 87.0
TWI59G0520 Tripterygium wilfordii HOM05D003084 ORTHO05D003580 1.4e-121 439.9 270 87.4
ClCG10G009340 Citrullus lanatus HOM05D003084 ORTHO05D003580 1.8e-121 439.5 270 87.0
MELO3C024822.2 Cucumis melo HOM05D003084 ORTHO05D003580 1.8e-121 439.5 270 87.0
CsaV3_4G009520 Cucumis sativus L. HOM05D003084 ORTHO05D003580 1.8e-121 439.5 270 87.0
Migut.J01608 Erythranthe guttata HOM05D003084 ORTHO05D003580 1.8e-121 439.5 270 87.0
Duzib052G0048 Durio zibethinus HOM05D003084 ORTHO05D003580 2.4e-121 439.1 270 87.0
Lj6g0000948 Lotus japonicus HOM05D003084 ORTHO05D003580 2.4e-121 439.1 270 86.7
Nn4g23295 Nelumbo nucifera HOM05D003084 ORTHO05D003580 2.4e-121 439.1 270 87.0
Peaxi162Scf00153g00138 Petunia axillaris HOM05D003084 ORTHO05D003580 2.4e-121 439.1 270 86.7
Sabra17G0037200 Salix brachista HOM05D003084 ORTHO05D003580 2.4e-121 439.1 270 87.0
Sabra17G0042500 Salix brachista HOM05D003084 ORTHO05D003580 2.4e-121 439.1 270 87.0
MSTRG.6294 Avicennia marina HOM05D003084 ORTHO05D003580 3.1e-121 438.7 270 86.7
CAN.G128.100 Capsicum annuum HOM05D003084 ORTHO05D003580 4.1e-121 438.3 270 86.3
CDE09G0434 Ceratophyllum demersum HOM05D003084 ORTHO05D003580 4.1e-121 438.3 270 87.0
Ca_00144_v3 Cicer arietinum L. HOM05D003084 ORTHO05D003580 4.1e-121 438.3 270 86.7
Psat4g019320 Pisum sativum HOM05D003084 ORTHO05D003580 4.1e-121 438.3 270 86.7
PGR142G4455 Punica granatum HOM05D003084 ORTHO05D003580 4.1e-121 438.3 270 86.3
Sopen10g031590 Solanum pennellii HOM05D003084 ORTHO05D003580 4.1e-121 438.3 270 86.3
PGSC0003DMG400028106 Solanum tuberosum HOM05D003084 ORTHO05D003580 4.1e-121 438.3 270 86.3
ATR0307G103 Amborella trichopoda HOM05D003084 ORTHO05D003580 5.3e-121 438.0 270 86.3
COL.COLO4_32309 Corchorus olitorius HOM05D003084 ORTHO05D003580 5.3e-121 438.0 270 86.3
Potri.017G050800 Populus trichocarpa HOM05D003084 ORTHO05D003580 5.3e-121 438.0 270 86.7
Thecc.02G134200 Theobroma cacao HOM05D003084 ORTHO05D003580 5.3e-121 438.0 270 86.7
Actinidia38769 Actinidia chinensis HOM05D003084 ORTHO05D003580 7.0e-121 437.6 270 86.7
AagrBONN_evm.TU.Sc2ySwM_362.2841 Anthoceros agrestis HOM05D003084 ORTHO05D003580 7.0e-121 437.6 270 85.9
Aqoxy2G00351 Aquilegia oxysepala HOM05D003084 ORTHO05D003580 7.0e-121 437.6 270 86.3
QL12p003834 Quercus lobata HOM05D003084 ORTHO05D003580 7.0e-121 437.6 270 86.7
Sed0019948 Sechium edule HOM05D003084 ORTHO05D003580 7.0e-121 437.6 270 86.3
Sc13g0006780 Simmondsia chinensis HOM05D003084 ORTHO05D003580 7.0e-121 437.6 270 86.7
unitig_744.g24164 Utricularia gibba HOM05D003084 ORTHO05D003580 7.0e-121 437.6 270 86.3
Aa31LG1G17630 Aethionema arabicum HOM05D003084 ORTHO05D003580 9.1e-121 437.2 270 86.3
arahy.Tifrunner.gnm1.ann1.4W8ZMG Arachis hypogaea HOM05D003084 ORTHO05D003580 9.1e-121 437.2 270 86.3
arahy.Tifrunner.gnm1.ann1.PVIH4H Arachis hypogaea HOM05D003084 ORTHO05D003580 9.1e-121 437.2 270 86.3
EL10Ac1g00935 Beta vulgaris HOM05D003084 ORTHO05D003580 9.1e-121 437.2 270 86.3
Cc02_g31230 Coffea canephora HOM05D003084 ORTHO05D003580 9.1e-121 437.2 270 87.0
Cc09_g09140 Coffea canephora HOM05D003084 ORTHO05D003580 9.1e-121 437.2 270 87.0
Haze_17408 Corylus avellana HOM05D003084 ORTHO05D003580 1.2e-120 436.8 270 86.3
Glyma.15G083300 Glycine max HOM05D003084 ORTHO05D003580 1.2e-120 436.8 270 86.3
Phvul.006G175600 Phaseolus vulgaris HOM05D003084 ORTHO05D003580 1.2e-120 436.8 270 86.3
Psat1g216360 Pisum sativum HOM05D003084 ORTHO05D003580 1.2e-120 436.8 270 85.9
RhsimUnG0019800 Rhododendron simsii HOM05D003084 ORTHO05D003580 1.2e-120 436.8 270 86.3
SGA_v2.0_scaffold106G30555 Striga asiatica HOM05D003084 ORTHO05D003580 1.2e-120 436.8 270 85.9
THA.LOC104799861 Tarenaya hassleriana HOM05D003084 ORTHO05D003580 1.2e-120 436.8 270 85.9
vmacro07762 Vaccinium macrocarpon HOM05D003084 ORTHO05D003580 1.2e-120 436.8 270 86.3
VMungo0540G2012 Vigna mungo HOM05D003084 ORTHO05D003580 1.2e-120 436.8 270 86.3
Ah.05g172970 Amaranthus hybridus HOM05D003084 ORTHO05D003580 2.0e-120 436.0 270 85.9
Ah.05g175190 Amaranthus hybridus HOM05D003084 ORTHO05D003580 2.0e-120 436.0 270 85.9
arahy.Tifrunner.gnm1.ann1.6856EH Arachis hypogaea HOM05D003084 ORTHO05D003580 2.0e-120 436.0 270 86.3
CiPaw.16G001600 Carya illinoinensis HOM05D003084 ORTHO05D003580 2.0e-120 436.0 270 86.3
CiPaw.16G001700 Carya illinoinensis HOM05D003084 ORTHO05D003580 2.0e-120 436.0 270 86.3
AUR62004235 Chenopodium quinoa HOM05D003084 ORTHO05D003580 2.0e-120 436.0 270 85.9
AUR62007850 Chenopodium quinoa HOM05D003084 ORTHO05D003580 2.0e-120 436.0 270 85.9
AUR62013613 Chenopodium quinoa HOM05D003084 ORTHO05D003580 2.0e-120 436.0 270 85.9
FvH4_2g14010 Fragaria vesca HOM05D003084 ORTHO05D003580 2.0e-120 436.0 270 86.3
FAN15G1682 Fragaria x ananassa HOM05D003084 ORTHO05D003580 2.0e-120 436.0 270 86.3
FAN20G2309 Fragaria x ananassa HOM05D003084 ORTHO05D003580 2.0e-120 436.0 270 86.3
FAN24G1613 Fragaria x ananassa HOM05D003084 ORTHO05D003580 2.0e-120 436.0 270 86.3
FAN27G2201 Fragaria x ananassa HOM05D003084 ORTHO05D003580 2.0e-120 436.0 270 86.3
Lalb_Chr15g0090381 Lupinus albus HOM05D003084 ORTHO05D003580 2.0e-120 436.0 270 85.9
Lalb_Chr18g0060491 Lupinus albus HOM05D003084 ORTHO05D003580 2.0e-120 436.0 270 85.9
RcHm_v2.0_Chr6g0275901 Rosa chinensis HOM05D003084 ORTHO05D003580 2.0e-120 436.0 270 86.3
AL8G41630 Arabidopsis lyrata HOM05D003084 ORTHO05D003580 2.7e-120 435.6 270 85.9
MBI04_g36083_MAGBIO Magnolia biondii HOM05D003084 ORTHO05D003580 2.7e-120 435.6 270 85.9
MBI14_g36930_MAGBIO Magnolia biondii HOM05D003084 ORTHO05D003580 2.7e-120 435.6 270 85.9
AT5G64270 Arabidopsis thaliana HOM05D003084 ORTHO05D003580 3.5e-120 435.3 270 85.6
Carub.0008s2506 Capsella rubella HOM05D003084 ORTHO05D003580 4.5e-120 434.9 270 85.6
Mapoly0134s0023 Marchantia polymorpha HOM05D003084 ORTHO05D003580 5.9e-120 434.5 270 85.6
Glyma.13G229200 Glycine max HOM05D003084 ORTHO05D003580 7.7e-120 434.1 270 85.6
Prupe.8G065000 Prunus persica HOM05D003084 ORTHO05D003580 7.7e-120 434.1 270 85.9
MD17G1162000 Malus domestica HOM05D003084 ORTHO05D003580 1.0e-119 433.7 270 85.6
MD17G1162100 Malus domestica HOM05D003084 ORTHO05D003580 1.0e-119 433.7 270 85.6
Pp3c11_14450 Physcomitrium patens HOM05D003084 ORTHO05D003580 1.0e-119 433.7 270 85.9
SHI54885 Sapria himalayana HOM05D003084 ORTHO05D003580 1.0e-119 433.7 270 85.9
CARHR278180 Cardamine hirsuta HOM05D003084 ORTHO05D003580 1.3e-119 433.3 269 85.9
PSO832G0894 Papaver somniferum HOM05D003084 ORTHO05D003580 1.3e-119 433.3 270 85.9
SEGI_22402 Sequoiadendron giganteum HOM05D003084 ORTHO05D003580 1.3e-119 433.3 270 85.9
BcaB04g19963 Brassica carinata HOM05D003084 ORTHO05D003580 1.7e-119 433.0 270 85.2
A09p08590 Brassica napus HOM05D003084 ORTHO05D003580 1.7e-119 433.0 270 85.2
C09p09710 Brassica napus HOM05D003084 ORTHO05D003580 1.7e-119 433.0 270 85.2
BolC9t53882H Brassica oleracea HOM05D003084 ORTHO05D003580 1.7e-119 433.0 270 85.2
BraA09t36508Z Brassica rapa HOM05D003084 ORTHO05D003580 1.7e-119 433.0 270 85.2
HanXRQChr07g0185681 Helianthus annuus HOM05D003084 ORTHO05D003580 1.7e-119 433.0 270 85.9
Lj3P537T27 Lonicera japonica HOM05D003084 ORTHO05D003580 2.2e-119 432.6 270 85.2
Lj3P547T47 Lonicera japonica HOM05D003084 ORTHO05D003580 2.2e-119 432.6 270 85.2
Sp2g27330 Schrenkiella parvula HOM05D003084 ORTHO05D003580 2.2e-119 432.6 270 84.8
PSO063G3636 Papaver somniferum HOM05D003084 ORTHO05D003580 2.9e-119 432.2 270 85.6
Os02g0146400 Oryza sativa ssp. japonica HOM05D003084 ORTHO05D003580 1.9e-118 429.5 270 84.8
Migut.D02560 Erythranthe guttata HOM05D003084 ORTHO05D003580 7.2e-118 427.6 270 84.4
SMO134G0059 Selaginella moellendorffii HOM05D003084 ORTHO05D003580 7.2e-118 427.6 270 83.7
CBR_g38933 Chara braunii HOM05D003084 ORTHO05D003580 9.4e-118 427.2 270 83.0
HPP92_010359 Vanilla planifolia HOM05D003084 ORTHO05D003580 1.2e-117 426.8 270 84.1
Zm00001eb208060 Zea mays HOM05D003084 ORTHO05D003580 1.2e-117 426.8 270 83.7
Zm00001eb232170 Zea mays HOM05D003084 ORTHO05D003580 1.2e-117 426.8 270 83.7
DCAR_017867 Daucus carota HOM05D003084 ORTHO05D003580 2.7e-117 425.6 270 83.7
HPP92_010380 Vanilla planifolia HOM05D003084 ORTHO05D003580 2.7e-117 425.6 271 84.1
CBR_g21841 Chara braunii HOM05D003084 ORTHO05D003580 1.0e-116 423.7 270 82.2
AUR62032335 Chenopodium quinoa HOM05D003084 ORTHO05D003580 1.0e-116 423.7 270 84.1
Nitab4.5_0003286g0010 Nicotiana tabacum HOM05D003084 ORTHO05D003580 3.4e-115 418.7 270 83.7
MCO09G793 Micromonas commoda HOM05D003084 ORTHO05D003580 1.1e-113 413.7 270 80.0
DCAR_026292 Daucus carota HOM05D003084 ORTHO05D003580 3.1e-113 412.1 270 80.4
Haze_07018 Corylus avellana HOM05D003084 ORTHO05D003580 5.4e-113 411.4 270 83.0
BolC3t18459H Brassica oleracea HOM05D003084 ORTHO05D003580 2.0e-112 409.5 269 80.7
Os02g0478900 Oryza sativa ssp. japonica HOM05D003084 ORTHO05D003580 8.5e-111 404.1 270 78.9
A06p30960 Brassica napus HOM05D003084 ORTHO05D003580 1.1e-110 403.7 269 80.3
BraA06t26038Z Brassica rapa HOM05D003084 ORTHO05D003580 1.1e-110 403.7 269 80.3
Thhalv10005618m.g Eutrema salsugineum HOM05D003084 ORTHO05D003580 1.1e-110 403.7 270 80.4
COL.COLO4_32308 Corchorus olitorius HOM05D003084 ORTHO05D003580 2.5e-110 402.5 270 78.5
PRCOL_00002641 Prasinoderma coloniale HOM05D003084 ORTHO05D003580 2.5e-110 402.5 270 77.4
Cre12.g494100 Chlamydomonas reinhardtii HOM05D003084 ORTHO05D003580 4.0e-108 395.2 270 77.0
Actinidia38789 Actinidia chinensis HOM05D003084 ORTHO05D003580 5.9e-104 381.3 239 85.8
Thhalv10024248m.g Eutrema salsugineum HOM05D003084 ORTHO05D003580 6.6e-103 377.9 267 74.9
CDE02G2072 Ceratophyllum demersum HOM05D003084 ORTHO05D003580 8.6e-103 377.5 233 87.1
FvH4_3g24440 Fragaria vesca HOM05D003084 ORTHO05D003580 8.6e-103 377.5 270 74.1
FAN11G1592 Fragaria x ananassa HOM05D003084 ORTHO05D003580 3.3e-102 375.6 270 73.7
RcHm_v2.0_Chr5g0043941 Rosa chinensis HOM05D003084 ORTHO05D003580 5.6e-102 374.8 270 74.1
SMO361G0653 Selaginella moellendorffii HOM05D003084 ORTHO05D003580 3.7e-98 362.1 270 70.0
SMO361G0072 Selaginella moellendorffii HOM05D003084 ORTHO05D003580 1.4e-97 360.1 270 69.6
Carub.0013s0010 Capsella rubella HOM05D003084 ORTHO05D003580 5.6e-94 348.2 270 72.2
Cfa022297 Carpinus fangiana HOM05D003084 ORTHO05D003580 2.8e-93 345.9 270 67.0
Haze_26699 Corylus avellana HOM05D003084 ORTHO05D003580 7.5e-91 337.8 275 66.2
vmacro02485 Vaccinium macrocarpon HOM05D003084 ORTHO05D003580 3.5e-88 328.9 240 77.9
HPP92_019915 Vanilla planifolia HOM05D003084 ORTHO05D003580 6.0e-88 328.2 210 82.4
Aqoxy3G02504 Aquilegia oxysepala HOM05D003084 ORTHO05D003580 1.7e-87 326.6 270 65.2
HPP92_010409 Vanilla planifolia HOM05D003084 ORTHO05D003580 3.0e-87 325.9 211 83.4
Actinidia28117 Actinidia chinensis HOM05D003084 ORTHO05D003580 2.0e-83 313.2 267 68.9
FAN21G2367 Fragaria x ananassa HOM05D003084 ORTHO05D003580 1.4e-81 307.0 250 67.2
Peaxi162Scf00541g00066 Petunia axillaris HOM05D003084 ORTHO05D003580 1.3e-79 300.4 271 62.7
GSVIVG01025852001 Vitis vinifera HOM05D003084 ORTHO05D003580 2.3e-79 299.7 211 77.7
Nitab4.5_0000062g0290 Nicotiana tabacum HOM05D003084 ORTHO05D003580 1.3e-66 257.3 144 91.7
ATR0618G293 Amborella trichopoda HOM05D003084 ORTHO05D003580 4.6e-64 248.8 175 77.7
CAN.G128.99 Capsicum annuum HOM05D003084 ORTHO05D003580 1.3e-61 240.7 248 56.0
Actinidia17683 Actinidia chinensis HOM05D003084 ORTHO05D003580 2.1e-56 223.4 261 49.0
DCAR_028101 Daucus carota HOM05D003084 ORTHO05D003580 1.3e-47 194.1 166 63.9
TPR.G10901 Trifolium pratense HOM05D003084 ORTHO05D003580 1.3e-47 194.1 200 59.5
DCAR_024485 Daucus carota HOM05D003084 ORTHO05D003580 2.8e-45 186.4 165 63.0
Rhsim09G0053300 Rhododendron simsii HOM05D003084 ORTHO05D003580 3.5e-40 169.5 123 77.2
C03p62000 Brassica napus HOM05D003084 ORTHO05D003580 4.6e-32 142.5 84 84.5
Pp3c7_19180 Physcomitrium patens HOM05D003084 ORTHO05D003580 2.9e-26 123.2 73 84.9
Peaxi162Scf00920g00062 Petunia axillaris HOM05D003084 ORTHO05D003580 1.9e-25 120.6 166 50.6
PGSC0003DMG400040134 Solanum tuberosum HOM05D003084 ORTHO05D003580 1.4e-23 114.4 155 46.5
Actinidia15649 Actinidia chinensis HOM05D003084 ORTHO05D003580 2.2e-21 107.1 166 42.2
Sopen10g031790 Solanum pennellii HOM05D003084 ORTHO05D003580 3.7e-21 106.3 147 43.5
MD12G1233800 Malus domestica HOM05D003084 ORTHO05D003580 1.2e-19 101.3 165 43.6
Actinidia37731 Actinidia chinensis HOM05D003084 ORTHO05D003580 1.0e-15 88.2 144 38.9
QL09p053393 Quercus lobata HOM05D003084 ORTHO05D003580 5.7e-14 82.4 45 88.9
Solyc10g081290.2 Solanum lycopersicum HOM05D003084 ORTHO05D003580 1.7e-13 80.9 126 40.5
Dinv04118 Davidia involucrata HOM05D003084 ORTHO05D003580 1.3e-10 71.2 46 78.3
RcHm_v2.0_Chr2g0106841 Rosa chinensis HOM05D003084 ORTHO05D003580 4.2e-09 66.2 74 52.7


User provided reference genes

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