Gene: PGSC0003DMG400040134
General Information
Structural Information
- Species Solanum tuberosum
- Gene Identifier PGSC0003DMG400040134
- Transcript Identifier PGSC0003DMT400090563
- Gene Type Coding gene
- Location ST4.03ch10 : 56201798-56202385 : positive
Gene Family Information
- ID HOM05D003084
- #Genes/#Species 223/98
- Phylogenetic origin
- ID ORTHO05D003580
- #Genes/#Species 214/98
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- pacid 37477038
- id PGSC0003DMG400040134.v4.03
- uniprot M1DKN8
Descriptions
- Description Splicing factor 3B subunit
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000245 | IBA IEA | GOA Database | spliceosomal complex assembly | |
| GO:0000245 | IEA | InterPro | spliceosomal complex assembly |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003729 | IBA IEA | GOA Database | mRNA binding | |
| GO:0003729 | IEA | InterPro | mRNA binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005681 | IEA | GOA Database | spliceosomal complex | |
| GO:0016021 | IEA | GOA Database | integral component of membrane | |
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0071013 | IBA | GOA Database | catalytic step 2 spliceosome | |
| GO:0071004 | IBA | GOA Database | U2-type prespliceosome | |
| GO:0005689 | IBA | GOA Database | U12-type spliceosomal complex | |
| GO:0005686 | IBA | GOA Database | U2 snRNP |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |