Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0044178 Camellia sinensis var. sinensis HOM05D004601 ORTHO05D005806 1.7e-48 195.7 96 100.0
CSS0021444 Camellia sinensis var. sinensis HOM05D004601 ORTHO05D005806 4.6e-22 107.8 56 89.3
Actinidia02499 Actinidia chinensis HOM05D004601 ORTHO05D005806 5.1e-21 104.4 56 85.7
Lsat_1_v5_gn_8_69120 Lactuca sativa HOM05D004601 ORTHO05D005806 5.1e-21 104.4 56 82.1
Lj7A622G14 Lonicera japonica HOM05D004601 ORTHO05D005806 2.5e-20 102.1 56 82.1
Hma1.2p1_0235F.1_g098680 Hydrangea macrophylla HOM05D004601 ORTHO05D005806 4.3e-20 101.3 56 82.1
TAR383G0412 Trochodendron aralioides HOM05D004601 ORTHO05D005806 7.3e-20 100.5 56 80.4
MBI16_g10345_MAGBIO Magnolia biondii HOM05D004601 ORTHO05D005806 9.5e-20 100.1 56 80.4
MBI16_g47869_MAGBIO Magnolia biondii HOM05D004601 ORTHO05D005806 9.5e-20 100.1 56 80.4
PGR142G2375 Punica granatum HOM05D004601 ORTHO05D005806 9.5e-20 100.1 87 56.3
PGR142G4125 Punica granatum HOM05D004601 ORTHO05D005806 9.5e-20 100.1 87 56.3
HPP92_021964 Vanilla planifolia HOM05D004601 ORTHO05D005806 1.2e-19 99.8 56 80.4
Dinv25455 Davidia involucrata HOM05D004601 ORTHO05D005806 1.6e-19 99.4 56 80.4
arahy.Tifrunner.gnm1.ann1.8TE3EA Arachis hypogaea HOM05D004601 ORTHO05D005806 2.8e-19 98.6 56 80.4
arahy.Tifrunner.gnm1.ann1.BQ8TF8 Arachis hypogaea HOM05D004601 ORTHO05D005806 2.8e-19 98.6 56 80.4
Oeu019558.1 Olea europaea HOM05D004601 ORTHO05D005806 2.8e-19 98.6 56 80.4
Prupe.1G074600 Prunus persica HOM05D004601 ORTHO05D005806 2.8e-19 98.6 56 75.0
ECA236G0938 Erigeron canadensis HOM05D004601 ORTHO05D005806 3.6e-19 98.2 56 76.8
Phvul.009G235800 Phaseolus vulgaris HOM05D004601 ORTHO05D005806 4.7e-19 97.8 56 76.8
Ca_02111_v3 Cicer arietinum L. HOM05D004601 ORTHO05D005806 6.2e-19 97.4 56 78.6
Lj6g0004756 Lotus japonicus HOM05D004601 ORTHO05D005806 6.2e-19 97.4 56 80.4
Psat1g144440 Pisum sativum HOM05D004601 ORTHO05D005806 6.2e-19 97.4 56 78.6
Nitab4.5_0000056g0070 Nicotiana tabacum HOM05D004601 ORTHO05D005806 8.1e-19 97.1 56 80.4
CiPaw.08G032200 Carya illinoinensis HOM05D004601 ORTHO05D005806 1.1e-18 96.7 56 80.4
Glyma.15G166700 Glycine max HOM05D004601 ORTHO05D005806 1.1e-18 96.7 56 75.0
AL8G33090 Arabidopsis lyrata HOM05D004601 ORTHO05D005806 1.4e-18 96.3 56 76.8
AT5G57160 Arabidopsis thaliana HOM05D004601 ORTHO05D005806 1.4e-18 96.3 56 76.8
Cfa013456 Carpinus fangiana HOM05D004601 ORTHO05D005806 1.4e-18 96.3 56 75.0
Medtr2g038030 Medicago truncatula HOM05D004601 ORTHO05D005806 1.4e-18 96.3 56 76.8
TPR.G7576 Trifolium pratense HOM05D004601 ORTHO05D000001 1.4e-18 96.3 56 76.8
GSVIVG01029314001 Vitis vinifera HOM05D004601 ORTHO05D005806 1.4e-18 96.3 56 75.0
Cpa.g.sc95.10 Carica papaya HOM05D004601 ORTHO05D005806 1.8e-18 95.9 56 75.0
HanXRQChr05g0141031 Helianthus annuus HOM05D004601 ORTHO05D005806 1.8e-18 95.9 56 75.0
Lalb_Chr08g0231931 Lupinus albus HOM05D004601 ORTHO05D005806 3.1e-18 95.1 56 75.0
Haze_22027 Corylus avellana HOM05D004601 ORTHO05D005806 4.0e-18 94.7 55 76.4
Gohir.D13G212700 Gossypium hirsutum HOM05D004601 ORTHO05D005806 4.0e-18 94.7 56 76.8
Gorai.013G243100 Gossypium raimondii HOM05D004601 ORTHO05D005806 4.0e-18 94.7 56 76.8
PSO063G2966 Papaver somniferum HOM05D004601 ORTHO05D005806 4.0e-18 94.7 56 78.6
vmacro05994 Vaccinium macrocarpon HOM05D004601 ORTHO05D005806 4.0e-18 94.7 56 75.0
MSTRG.5939 Avicennia marina HOM05D004601 ORTHO05D005806 5.2e-18 94.4 56 76.8
Potri.018G141900 Populus trichocarpa HOM05D004601 ORTHO05D005806 6.8e-18 94.0 56 73.2
BcaC04g19995 Brassica carinata HOM05D004601 ORTHO05D005806 8.9e-18 93.6 56 73.2
C09p48970 Brassica napus HOM05D004601 ORTHO05D005806 8.9e-18 93.6 56 73.2
PSO170G3696 Papaver somniferum HOM05D004601 ORTHO05D005806 8.9e-18 93.6 56 78.6
Sabra18G0116000 Salix brachista HOM05D004601 ORTHO05D005806 8.9e-18 93.6 56 73.2
BcaB08g35989 Brassica carinata HOM05D004601 ORTHO05D005806 1.2e-17 93.2 56 73.2
CARHR270950 Cardamine hirsuta HOM05D004601 ORTHO05D005806 1.2e-17 93.2 56 73.2
Duzib150G1331 Durio zibethinus HOM05D004601 ORTHO05D005806 1.2e-17 93.2 56 75.0
Thhalv10012474m.g Eutrema salsugineum HOM05D004601 ORTHO05D005806 1.2e-17 93.2 56 73.2
Atru.chr7.956 Acer truncatum HOM05D004601 ORTHO05D005806 1.5e-17 92.8 56 73.2
A10p14520 Brassica napus HOM05D004601 ORTHO05D005806 1.5e-17 92.8 56 71.4
BraA10t43541Z Brassica rapa HOM05D004601 ORTHO05D005806 1.5e-17 92.8 56 71.4
CANSAT11G0507 Cannabis sativa HOM05D004601 ORTHO05D005806 1.5e-17 92.8 56 73.2
Rhsim03G0267200 Rhododendron simsii HOM05D004601 ORTHO05D005806 1.5e-17 92.8 56 73.2
SGA_v2.0_scaffold112G31593 Striga asiatica HOM05D004601 ORTHO05D005806 1.5e-17 92.8 56 76.8
BolC9t57749H Brassica oleracea HOM05D004601 ORTHO05D005806 2.0e-17 92.4 56 71.4
Cc06_g20790 Coffea canephora HOM05D004601 ORTHO05D005806 2.0e-17 92.4 56 75.0
Sed0026596 Sechium edule HOM05D004601 ORTHO05D005806 2.0e-17 92.4 56 75.0
TWI63G1718 Tripterygium wilfordii HOM05D004601 ORTHO05D005806 2.0e-17 92.4 56 71.4
Ciclev10007283m.g Citrus clementina HOM05D004601 ORTHO05D005806 3.4e-17 91.7 56 71.4
Nn8g40736 Nelumbo nucifera HOM05D004601 ORTHO05D005806 3.4e-17 91.7 56 71.4
RcHm_v2.0_Chr4g0399311 Rosa chinensis HOM05D004601 ORTHO05D005806 3.4e-17 91.7 56 69.6
Migut.J00793 Erythranthe guttata HOM05D004601 ORTHO05D005806 4.4e-17 91.3 56 73.2
MD16G1247900 Malus domestica HOM05D004601 ORTHO05D005806 4.4e-17 91.3 56 67.9
Nitab4.5_0006199g0030 Nicotiana tabacum HOM05D004601 ORTHO05D005806 4.4e-17 91.3 56 75.0
Sc16g0011160 Simmondsia chinensis HOM05D004601 ORTHO05D005806 4.4e-17 91.3 56 71.4
Aqoxy7G02847 Aquilegia oxysepala HOM05D004601 ORTHO05D005806 5.8e-17 90.9 56 73.2
Solyc07g017990.3 Solanum lycopersicum HOM05D004601 ORTHO05D005806 5.8e-17 90.9 56 75.0
Sopen00g010200 Solanum pennellii HOM05D004601 ORTHO05D005806 5.8e-17 90.9 56 75.0
Sopen07g006920 Solanum pennellii HOM05D004601 ORTHO05D005806 5.8e-17 90.9 56 75.0
ATR0626G236 Amborella trichopoda HOM05D004601 ORTHO05D005806 7.6e-17 90.5 56 67.9
ClCG11G011730 Citrullus lanatus HOM05D004601 ORTHO05D005806 7.6e-17 90.5 56 71.4
CsaV3_2G008760 Cucumis sativus L. HOM05D004601 ORTHO05D005806 9.9e-17 90.1 80 56.2
FAN12G1367 Fragaria x ananassa HOM05D004601 ORTHO05D005806 9.9e-17 90.1 56 67.9
Ah.06g194430 Amaranthus hybridus HOM05D004601 ORTHO05D005806 1.3e-16 89.7 87 48.3
Sp6g18890 Schrenkiella parvula HOM05D004601 ORTHO05D005806 1.3e-16 89.7 56 71.4
FAN17G2239 Fragaria x ananassa HOM05D004601 ORTHO05D005806 2.2e-16 89.0 56 67.9
Thecc.09G186600 Theobroma cacao HOM05D004601 ORTHO05D005806 2.2e-16 89.0 56 71.4
THA.LOC104817773 Tarenaya hassleriana HOM05D004601 ORTHO05D005806 3.7e-16 88.2 56 69.6
Zm00001eb071490 Zea mays HOM05D004601 ORTHO05D005806 4.9e-16 87.8 56 71.4
Glyma.09G060066 Glycine max HOM05D004601 ORTHO05D005806 6.4e-16 87.4 55 70.9
Aa31LG3G13060 Aethionema arabicum HOM05D004601 ORTHO05D005806 1.1e-15 86.7 56 67.9
SEGI_14441 Sequoiadendron giganteum HOM05D004601 ORTHO05D005806 1.4e-15 86.3 56 66.1
COL.COLO4_06398 Corchorus olitorius HOM05D004601 ORTHO05D005806 3.2e-15 85.1 58 70.7
Mapoly0001s0137 Marchantia polymorpha HOM05D004601 ORTHO05D005806 7.8e-14 80.5 56 58.9
EL10Ac4g10170 Beta vulgaris HOM05D004601 ORTHO05D005806 3.9e-13 78.2 50 66.0
SHI03064 Sapria himalayana HOM05D004601 ORTHO05D005806 5.1e-13 77.8 56 62.5
Pp3c14_5920 Physcomitrium patens HOM05D004601 ORTHO05D005806 4.3e-12 74.7 56 55.4
AagrBONN_evm.TU.Sc2ySwM_228.1820 Anthoceros agrestis HOM05D004601 ORTHO05D005806 4.7e-11 71.2 80 40.0
SMO144G0133 Selaginella moellendorffii HOM05D004601 ORTHO05D005806 1.1e-10 70.1 82 37.8
AUR62039835 Chenopodium quinoa HOM05D004601 ORTHO05D005806 2.4e-10 68.9 87 41.4
AUR62000175 Chenopodium quinoa HOM05D004601 ORTHO05D005806 1.5e-09 66.2 56 50.0
CBR_g50203 Chara braunii HOM05D004601 ORTHO05D005806 2.0e-09 65.9 55 49.1
DCAR_020147 Daucus carota HOM05D004601 ORTHO05D005806 2.6e-09 65.5 36 83.3
Gohir.A13G208300 Gossypium hirsutum HOM05D004601 ORTHO05D005806 2.2e-08 62.4 36 77.8
CDE07G0894 Ceratophyllum demersum HOM05D004601 ORTHO05D005806 8.4e-08 60.5 36 77.8
VMungo1309G1314 Vigna mungo HOM05D004601 ORTHO05D005806 8.4e-08 60.5 32 84.4
AagrBONN_evm.TU.Sc2ySwM_228.3225 Anthoceros agrestis HOM05D004601 ORTHO05D005806 3.2e-07 58.5 52 51.9
Peaxi162Scf00231g01116 Petunia axillaris HOM05D004601 ORTHO05D005806 5.4e-07 57.8 36 72.2
Manes.14G159112 Manihot esculenta HOM05D004601 ORTHO05D005806 9.3e-07 57.0 36 72.2


User provided reference genes

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