Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0043711 Camellia sinensis var. sinensis HOM05D058445 ORTHO05D000001 1.0e-118 430.3 241 100.0
CSS0031740 Camellia sinensis var. sinensis HOM05D058445 ORTHO05D000001 6.8e-115 417.5 242 97.9
CSS0013612 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.3e-19 99.0 165 46.1
CSS0033338 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.0e-18 97.1 164 45.7
CSS0002733 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.3e-17 94.4 82 57.3
CSS0042868 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.2e-17 93.6 146 40.4
CSS0050260 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.2e-17 93.6 146 40.4
CSS0014474 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.5e-16 90.9 192 37.0
CSS0010001 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.8e-14 84.0 234 35.5
CSS0010076 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.1e-11 72.8 211 33.6
CSS0029317 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.1e-11 72.8 208 41.8
CSS0035135 Camellia sinensis var. sinensis HOM05D002365 ORTHO05D000001 9.1e-11 71.6 43 72.1
CSS0016191 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.2e-10 71.2 137 38.0
CSS0034909 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.5e-10 69.3 228 31.1
CSS0028899 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.2e-09 67.0 146 40.4
Sopen08g018630 Solanum pennellii HOM05D000006 ORTHO05D000001 1.1e-08 64.7 43 58.1
TPR.G31083 Trifolium pratense HOM05D000002 ORTHO05D000001 1.5e-08 64.3 53 56.6
Sopen12g023580 Solanum pennellii HOM05D000002 ORTHO05D000001 2.5e-08 63.5 43 58.1
Sopen09g021050 Solanum pennellii HOM05D000002 ORTHO05D000001 3.2e-08 63.2 42 57.1
CSS0003847 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.2e-08 62.8 152 36.8
CSS0005225 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.2e-08 62.8 276 25.7
Sopen00g013950 Solanum pennellii HOM05D000002 ORTHO05D000001 4.2e-08 62.8 49 53.1
Sopen09g028090 Solanum pennellii HOM05D000002 ORTHO05D000001 4.2e-08 62.8 49 53.1
Sopen10g027860 Solanum pennellii HOM05D000002 ORTHO05D000001 4.2e-08 62.8 49 53.1
Sopen04g023530 Solanum pennellii HOM05D000002 ORTHO05D000001 5.5e-08 62.4 49 55.1
Sopen10g015040 Solanum pennellii HOM05D000002 ORTHO05D000001 5.5e-08 62.4 42 57.1
Sopen11g010670 Solanum pennellii HOM05D000002 ORTHO05D000001 5.5e-08 62.4 45 55.6
CSS0038799 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 9.4e-08 61.6 69 50.7
Sopen09g015780 Solanum pennellii HOM05D000002 ORTHO05D000001 2.1e-07 60.5 45 53.3
Sopen03g008890 Solanum pennellii HOM05D000002 ORTHO05D000001 2.7e-07 60.1 49 49.0
Sopen04g024750 Solanum pennellii HOM05D000002 ORTHO05D000001 2.7e-07 60.1 49 49.0
Sopen06g030850 Solanum pennellii HOM05D000002 ORTHO05D000001 2.7e-07 60.1 49 49.0
Sopen08g013650 Solanum pennellii HOM05D000002 ORTHO05D000001 2.7e-07 60.1 49 49.0
Sopen09g003850 Solanum pennellii HOM05D000002 ORTHO05D000001 2.7e-07 60.1 49 49.0
Sopen02g013170 Solanum pennellii HOM05D000002 ORTHO05D000001 3.6e-07 59.7 45 51.1
Sopen08g019500 Solanum pennellii HOM05D000002 ORTHO05D000001 3.6e-07 59.7 45 51.1
Ca_07477_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 4.7e-07 59.3 43 62.8
Ah.04g160330 Amaranthus hybridus HOM05D000002 ORTHO05D000001 6.1e-07 58.9 43 55.8
Sopen01g031070 Solanum pennellii HOM05D000002 ORTHO05D000001 6.1e-07 58.9 49 49.0
Sopen04g024510 Solanum pennellii HOM05D000002 ORTHO05D000001 6.1e-07 58.9 49 46.9
Sopen08g023680 Solanum pennellii HOM05D000002 ORTHO05D000001 6.1e-07 58.9 49 53.1
ECA232G0091 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.0e-07 58.5 42 57.1
Sopen08g023660 Solanum pennellii HOM05D000002 ORTHO05D000001 8.0e-07 58.5 49 51.0
SEGI_02411 Sequoiadendron giganteum HOM05D004452 ORTHO05D000001 1.4e-06 57.8 55 43.6
VMungo0720G0396 Vigna mungo HOM05D000002 ORTHO05D000001 1.4e-06 57.8 47 51.1
RcHm_v2.0_Chr4g0401001 Rosa chinensis HOM05D000002 ORTHO05D000001 1.8e-06 57.4 71 42.3
SEGI_06619 Sequoiadendron giganteum HOM05D000006 ORTHO05D000001 1.8e-06 57.4 45 48.9
Sopen03g024110 Solanum pennellii HOM05D000002 ORTHO05D000001 1.8e-06 57.4 49 46.9
Sopen04g008290 Solanum pennellii HOM05D000002 ORTHO05D000001 1.8e-06 57.4 43 53.5
Sopen06g011300 Solanum pennellii HOM05D000002 ORTHO05D000001 1.8e-06 57.4 49 46.9
ECA232G2857 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.3e-06 57.0 44 52.3
RcHm_v2.0_Chr6g0266711 Rosa chinensis HOM05D000002 ORTHO05D000001 2.3e-06 57.0 70 41.4
Sopen01g008750 Solanum pennellii HOM05D000002 ORTHO05D026167 2.3e-06 57.0 49 46.9
Sopen01g012460 Solanum pennellii HOM05D000002 ORTHO05D000001 2.3e-06 57.0 48 39.6
Sopen04g023830 Solanum pennellii HOM05D000002 ORTHO05D000001 2.3e-06 57.0 49 49.0
Ca_02897_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 3.0e-06 56.6 43 60.5
FvH4_5g12471 Fragaria vesca HOM05D000002 ORTHO05D000001 3.0e-06 56.6 59 37.3
Sopen10g020710 Solanum pennellii HOM05D000002 ORTHO05D000001 3.0e-06 56.6 45 48.9
Ca_13665_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 4.0e-06 56.2 43 58.1
ECA247G0128 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.0e-06 56.2 55 49.1
RcHm_v2.0_Chr3g0475621 Rosa chinensis HOM05D000002 ORTHO05D000001 4.0e-06 56.2 71 39.4
SHI01064 Sapria himalayana HOM05D000002 ORTHO05D000001 4.0e-06 56.2 63 42.9
Sopen03g010360 Solanum pennellii HOM05D000002 ORTHO05D000001 4.0e-06 56.2 49 46.9
Sopen03g025910 Solanum pennellii HOM05D000118 ORTHO05D000001 4.0e-06 56.2 49 49.0
Sopen02g037950 Solanum pennellii HOM05D000002 ORTHO05D000001 5.2e-06 55.8 44 43.2
Sopen04g006220 Solanum pennellii HOM05D000002 ORTHO05D000001 5.2e-06 55.8 44 43.2
Sopen04g031580 Solanum pennellii HOM05D000002 ORTHO05D000001 5.2e-06 55.8 44 43.2
Sopen06g030380 Solanum pennellii HOM05D000002 ORTHO05D000001 5.2e-06 55.8 44 43.2
Sopen08g016270 Solanum pennellii HOM05D000002 ORTHO05D000001 5.2e-06 55.8 44 43.2
Sopen08g023380 Solanum pennellii HOM05D000002 ORTHO05D000001 5.2e-06 55.8 44 43.2
Sopen12g022300 Solanum pennellii HOM05D000002 ORTHO05D000001 5.2e-06 55.8 44 43.2
ECA240G0607 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.8e-06 55.5 44 47.7
ECA248G0191 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.8e-06 55.5 42 57.1
SEGI_14460 Sequoiadendron giganteum HOM05D013743 ORTHO05D017118 6.8e-06 55.5 45 46.7
Sopen03g004080 Solanum pennellii HOM05D000048 ORTHO05D000001 6.8e-06 55.5 43 51.2
Sopen04g023050 Solanum pennellii HOM05D000002 ORTHO05D000001 6.8e-06 55.5 44 43.2
Sopen05g028130 Solanum pennellii HOM05D000002 ORTHO05D000001 6.8e-06 55.5 69 37.7
Sopen12g022440 Solanum pennellii HOM05D000002 ORTHO05D000001 6.8e-06 55.5 43 51.2
ECA246G4321 Erigeron canadensis HOM05D000006 ORTHO05D000001 8.8e-06 55.1 73 35.6
ECA247G2977 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.8e-06 55.1 44 52.3
HanXRQChr02g0034791 Helianthus annuus HOM05D000002 ORTHO05D000001 8.8e-06 55.1 38 55.3
SHI09920 Sapria himalayana HOM05D000002 ORTHO05D000001 8.8e-06 55.1 44 56.8
Sopen03g007120 Solanum pennellii HOM05D000002 ORTHO05D000001 8.8e-06 55.1 63 41.3
Sopen06g004790 Solanum pennellii HOM05D000002 ORTHO05D000001 8.8e-06 55.1 48 47.9
Sopen12g022120 Solanum pennellii HOM05D000002 ORTHO05D000001 8.8e-06 55.1 72 43.1
Sopen12g024740 Solanum pennellii HOM05D000002 ORTHO05D000001 8.8e-06 55.1 69 33.3
TPR.G32556 Trifolium pratense HOM05D000002 ORTHO05D000001 8.8e-06 55.1 68 41.2


User provided reference genes

Program Settings