Gene: Sopen02g013170
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen02g013170
- Transcript Identifier Sopen02g013170.1
- Gene Type Coding gene
- Location Spenn-ch02 : 36388937-36398170 : positive
Gene Family Information
- ID HOM05D000002
- #Genes/#Species 26594/98
- Phylogenetic origin
- ID ORTHO05D000001
- #Genes/#Species 28434/96
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sopen02g013170.1
Descriptions
- Description Pyridoxal phosphate (PLP)-dependent transferases superfamily protein | FUNCTIONS IN: carbon-sulfur lyase activity, pyridoxal phosphate binding, catalytic activity | LOCATED IN: endomembrane system | CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain , EGF-like, alliinase , Pyridoxal phosphate-dependent transferase, major region, subdomain 1 , Allinase, C-terminal , Pyridoxal phosphate-dependent transferase, major region, subdomain 2 | BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0015074 | IEA | InterPro | DNA integration |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003824 | IEA | InterPro | catalytic activity | |
| GO:0016846 | IEA | InterPro | carbon-sulfur lyase activity | |
| GO:0003676 | IEA | InterPro | nucleic acid binding |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR015422 | Pyridoxal phosphate-dependent transferase, small domain |
| IPR013103 | Reverse transcriptase, RNA-dependent DNA polymerase |
| IPR006948 | Alliinase, C-terminal |
| IPR015421 | Pyridoxal phosphate-dependent transferase, major domain |
| IPR001584 | Integrase, catalytic core |
| IPR037029 | Alliinase, N-terminal domain superfamily |
| IPR015424 | Pyridoxal phosphate-dependent transferase |
| IPR025724 | GAG-pre-integrase domain |
| IPR043502 | DNA/RNA polymerase superfamily |
| IPR012337 | Ribonuclease H-like superfamily |
| IPR029472 | Retrotransposon Copia-like, N-terminal |
| IPR036397 | Ribonuclease H superfamily |
| IPR006947 | Alliinase, EGF-like domain |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |