Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0043668 Camellia sinensis var. sinensis HOM05D004199 ORTHO05D005905 0.0e+00 1657.9 944 100.0
Dinv05796 Davidia involucrata HOM05D004199 ORTHO05D005905 0.0e+00 1167.1 861 74.7
Hma1.2p1_0399F.1_g144220 Hydrangea macrophylla HOM05D004199 ORTHO05D005905 0.0e+00 1166.8 853 73.7
vmacro14411 Vaccinium macrocarpon HOM05D004199 ORTHO05D005905 0.0e+00 1161.4 976 71.7
Hma1.2p1_2265F.1_g318400 Hydrangea macrophylla HOM05D004199 ORTHO05D005905 0.0e+00 1119.8 858 72.3
Lj6A766T32 Lonicera japonica HOM05D004199 ORTHO05D005905 0.0e+00 1119.0 901 69.3
Rhsim03G0238800 Rhododendron simsii HOM05D004199 ORTHO05D005905 0.0e+00 1107.0 958 66.6
TAR623G0314 Trochodendron aralioides HOM05D004199 ORTHO05D005905 0.0e+00 1097.8 860 69.9
CiPaw.16G003100 Carya illinoinensis HOM05D004199 ORTHO05D005905 1.2e-308 1063.1 866 68.8
Eucgr.G02350 Eucalyptus grandis HOM05D004199 ORTHO05D005905 2.1e-308 1062.4 971 64.2
Sed0023765 Sechium edule HOM05D004199 ORTHO05D005905 3.5e-308 1061.6 954 64.6
Cc11_g10620 Coffea canephora HOM05D004199 ORTHO05D005905 2.3e-307 1058.9 928 65.4
Eucgr.K00868 Eucalyptus grandis HOM05D004199 ORTHO05D005905 1.5e-306 1056.2 966 63.5
DCAR_030084 Daucus carota HOM05D004199 ORTHO05D005905 4.7e-305 1051.2 894 66.2
Cfa018630 Carpinus fangiana HOM05D004199 ORTHO05D005905 3.1e-304 1048.5 902 65.5
Nn6g35106 Nelumbo nucifera HOM05D004199 ORTHO05D005905 1.9e-301 1039.3 879 66.6
CsaV3_5G033970 Cucumis sativus L. HOM05D004199 ORTHO05D005905 2.1e-300 1035.8 958 63.3
ClCG05G023030 Citrullus lanatus HOM05D004199 ORTHO05D005905 2.7e-300 1035.4 889 66.4
MELO3C012214.2 Cucumis melo HOM05D004199 ORTHO05D005905 4.6e-300 1034.6 956 63.3
CANSAT56G2350 Cannabis sativa HOM05D004199 ORTHO05D005905 6.0e-300 1034.2 908 65.5
Manes.04G160500 Manihot esculenta HOM05D004199 ORTHO05D005905 5.6e-298 1027.7 878 66.4
MD13G1046700 Malus domestica HOM05D004199 ORTHO05D005905 5.2e-296 1021.1 952 65.2
EL10Ac9g22638 Beta vulgaris HOM05D004199 ORTHO05D005905 1.5e-295 1019.6 955 60.4
Hma1.2p1_0592F.1_g185323 Hydrangea macrophylla HOM05D004199 ORTHO05D005905 7.6e-295 1017.3 796 71.1
RcHm_v2.0_Chr4g0435851 Rosa chinensis HOM05D004199 ORTHO05D005905 4.2e-293 1011.5 910 64.2
COL.COLO4_31201 Corchorus olitorius HOM05D004199 ORTHO05D005905 1.4e-288 996.5 869 64.8
MD16G1048400 Malus domestica HOM05D004199 ORTHO05D005905 1.5e-287 993.0 953 65.4
FAN12G0509 Fragaria x ananassa HOM05D004199 ORTHO05D005905 2.9e-286 988.8 902 64.2
FAN22G1977 Fragaria x ananassa HOM05D004199 ORTHO05D005905 3.8e-286 988.4 912 63.6
Ah.04g153070 Amaranthus hybridus HOM05D004199 ORTHO05D005905 1.1e-285 986.9 914 60.4
FvH4_4g28100 Fragaria vesca HOM05D004199 ORTHO05D005905 2.4e-285 985.7 905 64.0
Haze_17439 Corylus avellana HOM05D004199 ORTHO05D005905 4.2e-285 984.9 902 63.9
MBI01_g12859_MAGBIO Magnolia biondii HOM05D004199 ORTHO05D005905 1.0e-283 980.3 862 64.5
Sopen05g005660 Solanum pennellii HOM05D004199 ORTHO05D005905 3.9e-283 978.4 875 62.4
FAN07G1167 Fragaria x ananassa HOM05D004199 ORTHO05D005905 2.5e-282 975.7 906 63.1
FAN17G3109 Fragaria x ananassa HOM05D004199 ORTHO05D005905 4.3e-282 974.9 860 64.0
Gohir.A10G057500 Gossypium hirsutum HOM05D004199 ORTHO05D005905 2.1e-281 972.6 918 61.2
Gohir.D10G059300 Gossypium hirsutum HOM05D004199 ORTHO05D005905 3.6e-281 971.8 918 61.8
Atru.chr6.1864_Atru.chr6.1865 Acer truncatum HOM05D004199 ORTHO05D005905 4.8e-281 971.5 852 64.3
PGSC0003DMG400000826 Solanum tuberosum HOM05D004199 ORTHO05D005905 1.1e-280 970.3 873 62.0
SGA_v2.0_scaffold14G06820 Striga asiatica HOM05D004199 ORTHO05D005905 1.1e-280 970.3 912 62.5
Gorai.011G063300 Gossypium raimondii HOM05D004199 ORTHO05D005905 1.4e-280 969.9 918 61.8
AUR62044199 Chenopodium quinoa HOM05D004199 ORTHO05D005905 1.8e-280 969.5 956 59.0
CAN.G184.89 Capsicum annuum HOM05D004199 ORTHO05D005905 3.2e-277 958.7 864 61.5
TWI53G1601 Tripterygium wilfordii HOM05D004199 ORTHO05D005905 1.2e-276 956.8 852 63.7
Peaxi162Scf00102g00927 Petunia axillaris HOM05D004199 ORTHO05D005905 3.9e-275 951.8 870 62.0
Potri.008G002600 Populus trichocarpa HOM05D004199 ORTHO05D005905 1.1e-274 950.3 886 61.4
EL10Ac8g19592 Beta vulgaris HOM05D004199 ORTHO05D005905 7.4e-274 947.6 958 57.7
Thecc.10G125100 Theobroma cacao HOM05D004199 ORTHO05D005905 7.4e-274 947.6 870 63.1
Aqoxy2G01512 Aquilegia oxysepala HOM05D004199 ORTHO05D005905 2.0e-271 939.5 857 61.1
Nitab4.5_0004122g0060 Nicotiana tabacum HOM05D004199 ORTHO05D005905 5.8e-271 937.9 974 56.4
Ciclev10014191m.g Citrus clementina HOM05D004199 ORTHO05D005905 1.0e-270 937.2 862 61.8
Sc17g0004690 Simmondsia chinensis HOM05D004199 ORTHO05D005905 6.5e-270 934.5 897 62.8
Lsat_1_v5_gn_4_1641 Lactuca sativa HOM05D004199 ORTHO05D005905 2.1e-265 919.5 920 61.0
Sabra08G0000600 Salix brachista HOM05D004199 ORTHO05D005905 4.8e-265 918.3 928 58.4
ECA234G0057 Erigeron canadensis HOM05D004199 ORTHO05D005905 1.4e-264 916.8 905 59.8
Prupe.1G305200 Prunus persica HOM05D004199 ORTHO05D005905 1.4e-264 916.8 956 60.3
Psat2g189000 Pisum sativum HOM05D004199 ORTHO05D005905 4.2e-261 905.2 909 57.8
HanXRQChr17g0568011 Helianthus annuus HOM05D004199 ORTHO05D005905 3.5e-260 902.1 812 63.8
Ca_25946_v3 Cicer arietinum L. HOM05D004199 ORTHO05D005905 7.9e-260 901.0 879 59.4
VMungo1383G0908 Vigna mungo HOM05D004199 ORTHO05D005905 1.8e-259 899.8 912 57.2
Glyma.07G227400 Glycine max HOM05D004199 ORTHO05D005905 2.8e-257 892.5 922 57.5
THA.LOC104800384 Tarenaya hassleriana HOM05D004199 ORTHO05D005905 2.8e-257 892.5 905 56.9
PSO339G4136 Papaver somniferum HOM05D004199 ORTHO05D005905 3.7e-257 892.1 872 59.5
Actinidia38395 Actinidia chinensis HOM05D004199 ORTHO05D005905 6.3e-257 891.3 725 70.1
Nitab4.5_0011513g0020 Nicotiana tabacum HOM05D004199 ORTHO05D005905 6.3e-257 891.3 948 56.0
Aa31LG3G17980 Aethionema arabicum HOM05D004199 ORTHO05D005905 1.8e-256 889.8 870 57.5
Lj3g0002767 Lotus japonicus HOM05D004199 ORTHO05D005905 1.8e-256 889.8 874 58.5
Phvul.001G030200 Phaseolus vulgaris HOM05D004199 ORTHO05D005905 1.2e-255 887.1 907 56.4
ATR0665G261 Amborella trichopoda HOM05D004199 ORTHO05D005905 8.5e-254 880.9 865 58.5
Glyma.20G028100 Glycine max HOM05D004199 ORTHO05D005905 1.9e-253 879.8 919 57.3
Lalb_Chr10g0099721 Lupinus albus HOM05D004199 ORTHO05D005905 1.9e-253 879.8 871 58.6
PSO801G0529 Papaver somniferum HOM05D004199 ORTHO05D005905 2.5e-253 879.4 922 56.8
Glyma.07G155300 Glycine max HOM05D004199 ORTHO05D005905 4.6e-252 875.2 915 57.3
Medtr5g007520 Medicago truncatula HOM05D004199 ORTHO05D005905 2.4e-248 862.8 917 57.3
Migut.E00297 Erythranthe guttata HOM05D004199 ORTHO05D005905 5.3e-248 861.7 864 57.4
Duzib235G0865 Durio zibethinus HOM05D004199 ORTHO05D005905 1.2e-247 860.5 875 58.7
CDE05G0525 Ceratophyllum demersum HOM05D004199 ORTHO05D005905 4.7e-244 848.6 907 55.8
unitig_22.g6876 Utricularia gibba HOM05D004199 ORTHO05D005905 6.7e-243 844.7 883 54.9
arahy.Tifrunner.gnm1.ann1.9AQU5H Arachis hypogaea HOM05D004199 ORTHO05D005905 2.8e-241 839.3 879 57.2
arahy.Tifrunner.gnm1.ann1.P5TZTU Arachis hypogaea HOM05D004199 ORTHO05D005905 1.9e-237 826.6 901 55.8
CDE01G0057 Ceratophyllum demersum HOM05D004199 ORTHO05D005905 9.7e-234 814.3 853 56.2
CARHR204430 Cardamine hirsuta HOM05D004199 ORTHO05D005905 1.3e-233 813.9 921 52.4
TPR.G37944 Trifolium pratense HOM05D004199 ORTHO05D005905 4.8e-233 812.0 763 59.1
A03p03960 Brassica napus HOM05D004199 ORTHO05D005905 1.9e-229 800.0 900 52.1
SEGI_39962 Sequoiadendron giganteum HOM05D004199 ORTHO05D005905 1.9e-229 800.0 866 54.4
HPP92_022758 Vanilla planifolia HOM05D004199 ORTHO05D005905 3.4e-226 789.3 864 53.7
BcaB08g37246 Brassica carinata HOM05D004199 ORTHO05D005905 2.8e-225 786.2 839 53.3
Thhalv10012615m.g Eutrema salsugineum HOM05D004199 ORTHO05D005905 8.3e-225 784.6 862 53.4
BcaB01g05585 Brassica carinata HOM05D004199 ORTHO05D005905 2.4e-224 783.1 861 53.9
A10p28170 Brassica napus HOM05D004199 ORTHO05D005905 7.7e-223 778.1 910 50.8
BraA10t44866Z Brassica rapa HOM05D004199 ORTHO05D005905 7.7e-223 778.1 910 50.8
BraA03t09739Z Brassica rapa HOM05D004199 ORTHO05D005905 1.7e-222 776.9 905 51.3
Lalb_Chr04g0254951 Lupinus albus HOM05D004199 ORTHO05D005905 6.5e-222 775.0 917 53.4
C09p68380 Brassica napus HOM05D004199 ORTHO05D005905 2.5e-221 773.1 911 50.7
AL6G19260 Arabidopsis lyrata HOM05D004199 ORTHO05D005905 6.8e-219 765.0 910 51.4
BolC9t59585H Brassica oleracea HOM05D004199 ORTHO05D005905 2.0e-218 763.5 913 50.4
AT5G08550 Arabidopsis thaliana HOM05D004199 ORTHO05D005905 3.1e-216 756.1 904 50.2
Solyc05g009850.4 Solanum lycopersicum HOM05D004199 ORTHO05D005905 6.6e-214 748.4 614 65.5
Carub.0006s0751 Capsella rubella HOM05D004199 ORTHO05D005905 6.8e-211 738.4 844 50.5
Aqoxy6G00799 Aquilegia oxysepala HOM05D004199 ORTHO05D005905 2.9e-209 733.0 857 51.2
C03p04430 Brassica napus HOM05D004199 ORTHO05D005905 5.4e-208 728.8 902 48.6
Sp6g34340 Schrenkiella parvula HOM05D004199 ORTHO05D005905 3.5e-207 726.1 871 50.1
BolC3t12974H Brassica oleracea HOM05D004199 ORTHO05D005905 1.5e-205 720.7 902 48.4
Os03g0853700 Oryza sativa ssp. japonica HOM05D004199 ORTHO05D005905 4.3e-197 692.6 948 44.8
AagrBONN_evm.TU.Sc2ySwM_228.4147 Anthoceros agrestis HOM05D004199 ORTHO05D005905 5.1e-190 669.1 879 47.3
Zm00001eb064800 Zea mays HOM05D004199 ORTHO05D005905 5.1e-190 669.1 901 45.5
GSVIVG01011956001 Vitis vinifera HOM05D004199 ORTHO05D005905 2.1e-183 647.1 485 70.5
AagrBONN_evm.TU.Sc2ySwM_368.435 Anthoceros agrestis HOM05D004199 ORTHO05D005905 1.1e-179 634.8 879 46.1
Pp3c5_20240 Physcomitrium patens HOM05D004199 ORTHO05D005905 1.5e-178 630.9 877 46.2
Oeu041359.1 Olea europaea HOM05D004199 ORTHO05D005905 1.7e-177 627.5 477 68.6
Mapoly0131s0026 Marchantia polymorpha HOM05D004199 ORTHO05D005905 2.2e-177 627.1 876 45.7
AUR62042759 Chenopodium quinoa HOM05D004199 ORTHO05D005905 1.4e-163 581.3 482 64.5
Rhsim01G0212500 Rhododendron simsii HOM05D004199 ORTHO05D005905 1.3e-161 574.7 545 62.6
SMO259G0010 Selaginella moellendorffii HOM05D004199 ORTHO05D005905 3.2e-152 543.5 862 40.7
CBR_g46838 Chara braunii HOM05D004199 ORTHO05D005905 7.0e-123 446.0 923 36.7
GSVIVG01011955001 Vitis vinifera HOM05D004199 ORTHO05D005905 5.5e-112 409.8 364 67.6
Nitab4.5_0007631g0010 Nicotiana tabacum HOM05D004199 ORTHO05D005905 5.7e-109 399.8 482 50.6
QL01p046262 Quercus lobata HOM05D004199 ORTHO05D005905 6.8e-102 376.3 389 61.7
Oeu041360.1 Olea europaea HOM05D004199 ORTHO05D005905 2.8e-100 370.9 486 51.6
Actinidia13675 Actinidia chinensis HOM05D004199 ORTHO05D005905 2.3e-94 351.3 454 55.3
AT5G09210 Arabidopsis thaliana HOM05D004199 ORTHO05D005905 2.3e-94 351.3 311 59.8
Zm00001eb177730 Zea mays HOM05D004199 ORTHO05D005905 2.0e-90 338.2 437 46.2
Zm00001eb381810 Zea mays HOM05D004199 ORTHO05D005905 7.3e-88 329.7 427 46.6
AUR62033048 Chenopodium quinoa HOM05D004199 ORTHO05D005905 1.6e-87 328.6 420 52.9
Zm00001eb323900 Zea mays HOM05D004199 ORTHO05D005905 1.4e-78 298.9 331 51.7
Glyma.18G205900 Glycine max HOM05D004199 ORTHO05D005905 1.5e-77 295.4 295 54.2
CARHR203800 Cardamine hirsuta HOM05D004199 ORTHO05D005905 7.8e-74 283.1 261 57.1
Actinidia13676 Actinidia chinensis HOM05D004199 ORTHO05D005905 2.8e-71 274.6 170 81.8
MCO14G506 Micromonas commoda HOM05D004199 ORTHO05D005905 6.2e-63 246.9 591 30.3
Cpa.g.sc221.8 Carica papaya HOM05D004199 ORTHO05D005905 4.9e-60 237.3 331 49.8
Cre06.g269350 Chlamydomonas reinhardtii HOM05D004199 ORTHO05D005905 2.1e-58 231.9 1001 25.9
EL10Ac6g14565 Beta vulgaris HOM05D004199 ORTHO05D005905 1.5e-53 215.7 163 65.0
Potri.006G020200 Populus trichocarpa HOM05D004199 ORTHO05D005905 4.5e-37 161.0 151 64.2
Potri.006G020400 Populus trichocarpa HOM05D004199 ORTHO05D005905 1.3e-36 159.5 151 64.2
EL10Ac6g13882 Beta vulgaris HOM05D004199 ORTHO05D005905 1.2e-29 136.3 96 66.7
Nitab4.5_0000520g0050 Nicotiana tabacum HOM05D004199 ORTHO05D005905 1.2e-26 126.3 202 43.6
Thecc.06G064500 Theobroma cacao HOM05D004199 ORTHO05D005905 1.2e-21 109.8 77 71.4
CARHR069330 Cardamine hirsuta HOM05D004199 ORTHO05D005905 3.4e-21 108.2 85 63.5
Cpa.g.sc221.6 Carica papaya HOM05D004199 ORTHO05D005905 2.7e-18 98.6 65 76.9
COL.COLO4_28252 Corchorus olitorius HOM05D004199 ORTHO05D025158 5.7e-16 90.9 90 58.9
COL.COLO4_32069 Corchorus olitorius HOM05D004199 ORTHO05D025158 5.7e-16 90.9 90 57.8
AagrBONN_evm.TU.Sc2ySwM_368.450 Anthoceros agrestis HOM05D004199 ORTHO05D005905 9.7e-16 90.1 84 51.2
CARHR069340 Cardamine hirsuta HOM05D004199 ORTHO05D005905 2.2e-12 79.0 76 55.3
Sabra10G0198200 Salix brachista HOM05D004199 ORTHO05D349944 2.9e-12 78.6 142 44.4
COL.COLO4_08066 Corchorus olitorius HOM05D004199 ORTHO05D025158 2.1e-10 72.4 89 51.7
AagrBONN_evm.TU.Sc2ySwM_368.453 Anthoceros agrestis HOM05D030179 ORTHO05D026588 5.7e-08 64.3 53 52.8
EL10Ac5g11598 Beta vulgaris HOM05D004199 ORTHO05D088829 5.7e-08 64.3 63 50.8
CARHR147400 Cardamine hirsuta HOM05D004199 ORTHO05D005905 7.4e-08 63.9 128 33.6
EL10Ac2g03784 Beta vulgaris HOM05D004199 ORTHO05D019838 3.7e-07 61.6 64 53.1
EL10Ac3g06366 Beta vulgaris HOM05D004199 ORTHO05D019838 3.7e-07 61.6 64 53.1
EL10Ac7g17540 Beta vulgaris HOM05D000966 ORTHO05D019838 3.1e-06 58.5 60 55.0
EL10As3g23368 Beta vulgaris HOM05D004199 ORTHO05D019838 7.0e-06 57.4 132 37.1


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