Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0012715 Camellia sinensis var. sinensis HOM05D000780 ORTHO05D008187 4.3e-107 391.3 199 100.0
CSS0043062 Camellia sinensis var. sinensis HOM05D000780 ORTHO05D008187 4.3e-107 391.3 199 100.0
Hma1.2p1_0123F.1_g058210 Hydrangea macrophylla HOM05D000780 ORTHO05D008187 1.9e-94 349.4 201 86.1
GSVIVG01026325001 Vitis vinifera HOM05D000780 ORTHO05D008187 9.6e-91 337.0 197 85.3
vmacro19977 Vaccinium macrocarpon HOM05D000780 ORTHO05D008187 8.1e-90 334.0 202 84.2
TAR365G0867 Trochodendron aralioides HOM05D000780 ORTHO05D008187 2.4e-89 332.4 200 83.0
PGR142G2101 Punica granatum HOM05D000780 ORTHO05D008187 4.0e-89 331.6 199 82.9
Actinidia06829 Actinidia chinensis HOM05D000780 ORTHO05D008187 1.2e-88 330.1 196 84.2
Duzib177G0863 Durio zibethinus HOM05D000780 ORTHO05D009033 1.2e-88 330.1 192 84.4
ECA232G3805 Erigeron canadensis HOM05D000780 ORTHO05D008187 1.5e-88 329.7 200 82.0
HanXRQChr15g0491391 Helianthus annuus HOM05D000780 ORTHO05D008187 2.6e-88 328.9 195 82.1
Atru.chr2.1118 Acer truncatum HOM05D000780 ORTHO05D008187 1.3e-87 326.6 193 84.5
Gohir.A13G161900 Gossypium hirsutum HOM05D000780 ORTHO05D008187 1.7e-87 326.2 192 84.4
CiPaw.07G077300 Carya illinoinensis HOM05D000780 ORTHO05D008187 3.8e-87 325.1 197 81.2
Cc09_g03050 Coffea canephora HOM05D000780 ORTHO05D008187 3.8e-87 325.1 197 80.2
Gohir.D13G172100 Gossypium hirsutum HOM05D000780 ORTHO05D008187 4.9e-87 324.7 192 83.9
Thecc.05G266200 Theobroma cacao HOM05D000780 ORTHO05D008187 4.9e-87 324.7 193 82.9
Glyma.10G167500 Glycine max HOM05D000780 ORTHO05D008187 1.9e-86 322.8 197 81.2
Lj5g0021253 Lotus japonicus HOM05D000780 ORTHO05D008187 4.2e-86 321.6 195 81.0
Ciclev10022342m.g Citrus clementina HOM05D000780 ORTHO05D008187 7.1e-86 320.9 199 81.4
Potri.013G050400 Populus trichocarpa HOM05D000780 ORTHO05D008187 7.1e-86 320.9 199 81.4
Nitab4.5_0003148g0010 Nicotiana tabacum HOM05D000780 ORTHO05D008187 9.3e-86 320.5 189 84.1
Nn1g03034 Nelumbo nucifera HOM05D000780 ORTHO05D008187 1.2e-85 320.1 191 83.8
Lsat_1_v5_gn_9_45901 Lactuca sativa HOM05D000780 ORTHO05D008187 2.1e-85 319.3 195 81.0
Eucgr.B02158 Eucalyptus grandis HOM05D000780 ORTHO05D008187 3.5e-85 318.5 202 79.7
Peaxi162Scf00077g00146 Petunia axillaris HOM05D000780 ORTHO05D008187 3.5e-85 318.5 191 83.2
Phvul.L001832 Phaseolus vulgaris HOM05D000780 ORTHO05D008187 4.6e-85 318.2 197 79.2
Migut.F02051 Erythranthe guttata HOM05D000780 ORTHO05D008187 6.0e-85 317.8 199 78.9
PGSC0003DMG400028708 Solanum tuberosum HOM05D000780 ORTHO05D008187 7.9e-85 317.4 189 84.7
VMungo0720G3181 Vigna mungo HOM05D000780 ORTHO05D008187 7.9e-85 317.4 197 78.7
Nitab4.5_0000841g0110 Nicotiana tabacum HOM05D000780 ORTHO05D008187 1.8e-84 316.2 189 83.1
THA.LOC104821579 Tarenaya hassleriana HOM05D000780 ORTHO05D008187 2.3e-84 315.8 191 82.2
arahy.Tifrunner.gnm1.ann1.A1PM7K Arachis hypogaea HOM05D000780 ORTHO05D008187 3.0e-84 315.5 197 78.7
Lj2A46T71 Lonicera japonica HOM05D000780 ORTHO05D008187 3.0e-84 315.5 186 83.9
Cfa006318 Carpinus fangiana HOM05D000780 ORTHO05D008187 1.5e-83 313.2 201 78.6
Sopen04g021260 Solanum pennellii HOM05D000780 ORTHO05D008187 1.9e-83 312.8 189 83.6
Prupe.6G352700 Prunus persica HOM05D000780 ORTHO05D008187 2.5e-83 312.4 193 80.8
Solyc04g050480.4 Solanum lycopersicum HOM05D000780 ORTHO05D008187 2.5e-83 312.4 189 83.1
Manes.08G142200 Manihot esculenta HOM05D000780 ORTHO05D008187 4.3e-83 311.6 195 81.0
TPR.G10275 Trifolium pratense HOM05D000780 ORTHO05D008187 4.3e-83 311.6 191 80.1
MELO3C026663.2 Cucumis melo HOM05D000780 ORTHO05D008187 5.6e-83 311.2 199 78.9
Medtr1g079767 Medicago truncatula HOM05D000780 ORTHO05D008187 5.6e-83 311.2 192 77.6
arahy.Tifrunner.gnm1.ann1.22BZB2 Arachis hypogaea HOM05D000780 ORTHO05D008187 9.6e-83 310.5 197 77.2
Sp5g21080 Schrenkiella parvula HOM05D000780 ORTHO05D008187 9.6e-83 310.5 189 80.4
CDE08G0869 Ceratophyllum demersum HOM05D000780 ORTHO05D008187 1.3e-82 310.1 193 78.8
MSTRG.9218 Avicennia marina HOM05D000780 ORTHO05D008187 2.8e-82 308.9 199 77.9
FvH4_6g01510 Fragaria vesca HOM05D000780 ORTHO05D008187 3.7e-82 308.5 194 77.8
SalBow1G0848 Salvia bowleyana HOM05D000780 ORTHO05D008187 4.8e-82 308.1 196 79.1
Sed0008093 Sechium edule HOM05D000780 ORTHO05D008187 4.8e-82 308.1 199 78.4
Aqoxy5G00096 Aquilegia oxysepala HOM05D000780 ORTHO05D008187 1.1e-81 307.0 200 77.5
Gorai.013G188600 Gossypium raimondii HOM05D000780 ORTHO05D008187 1.1e-81 307.0 219 73.5
RcHm_v2.0_Chr3g0449181 Rosa chinensis HOM05D000780 ORTHO05D008187 1.4e-81 306.6 194 77.3
Hund21757 Selenicereus undatus HOM05D000780 ORTHO05D008187 1.8e-81 306.2 194 79.9
CANSAT54G1591 Cannabis sativa HOM05D000780 ORTHO05D008187 3.1e-81 305.4 195 77.4
CsaV3_3G029860 Cucumis sativus L. HOM05D000780 ORTHO05D008187 4.0e-81 305.1 199 77.9
Sabra13G0046100 Salix brachista HOM05D000780 ORTHO05D008187 4.0e-81 305.1 201 77.6
FAN05G1554 Fragaria x ananassa HOM05D003786 ORTHO05D008187 5.3e-81 304.7 190 77.9
FAN05G3511 Fragaria x ananassa HOM05D003786 ORTHO05D008187 5.3e-81 304.7 190 77.9
FAN14G4371 Fragaria x ananassa HOM05D003786 ORTHO05D008187 1.2e-80 303.5 190 77.4
Lalb_Chr06g0168371 Lupinus albus HOM05D000780 ORTHO05D008187 1.5e-80 303.1 197 77.7
AL7G51540 Arabidopsis lyrata HOM05D000780 ORTHO05D008187 2.0e-80 302.8 191 78.5
CAN.G1311.4 Capsicum annuum HOM05D000780 ORTHO05D008187 5.8e-80 301.2 188 79.8
C06p39320 Brassica napus HOM05D000780 ORTHO05D008187 7.6e-80 300.8 189 78.3
BolC6t39025H Brassica oleracea HOM05D000780 ORTHO05D008187 7.6e-80 300.8 189 78.3
Carub.0007s3696 Capsella rubella HOM05D000780 ORTHO05D008187 2.2e-79 299.3 191 77.5
AUR62000636 Chenopodium quinoa HOM05D000780 ORTHO05D008187 2.2e-79 299.3 200 76.5
MD12G1250600 Malus domestica HOM05D000780 ORTHO05D008187 3.8e-79 298.5 192 79.2
Oeu001248.1 Olea europaea HOM05D000780 ORTHO05D008187 3.8e-79 298.5 185 81.1
QL03p032337 Quercus lobata HOM05D000780 ORTHO05D008187 3.8e-79 298.5 249 64.7
QL01p042023 Quercus lobata HOM05D000780 ORTHO05D008187 6.5e-79 297.7 249 64.7
PSO832G2551 Papaver somniferum HOM05D000780 ORTHO05D008187 1.1e-78 297.0 199 77.4
CARHR263660 Cardamine hirsuta HOM05D000780 ORTHO05D008187 1.9e-78 296.2 191 78.0
AUR62006990 Chenopodium quinoa HOM05D000780 ORTHO05D008187 1.9e-78 296.2 195 75.9
BcaC08g46086 Brassica carinata HOM05D000780 ORTHO05D008187 2.5e-78 295.8 188 77.7
BraA07t30934Z Brassica rapa HOM05D000780 ORTHO05D008187 4.2e-78 295.0 188 77.1
A07p33060 Brassica napus HOM05D000780 ORTHO05D008187 5.5e-78 294.7 188 77.1
Aa31LG2G2020 Aethionema arabicum HOM05D000780 ORTHO05D008187 7.1e-78 294.3 187 80.2
Thhalv10019185m.g Eutrema salsugineum HOM05D000780 ORTHO05D008187 1.6e-77 293.1 189 76.7
HPP92_012831 Vanilla planifolia HOM05D000780 ORTHO05D008187 2.7e-77 292.4 189 75.7
Psat6g142000 Pisum sativum HOM05D000780 ORTHO05D008187 4.6e-77 291.6 177 80.8
Sc08g0004580 Simmondsia chinensis HOM05D000780 ORTHO05D008187 6.0e-77 291.2 208 73.6
BcaB01g01289 Brassica carinata HOM05D000780 ORTHO05D008187 7.9e-77 290.8 189 75.7
AT5G38890 Arabidopsis thaliana HOM05D000780 ORTHO05D008187 1.8e-76 289.7 190 76.3
EL10Ac4g09772 Beta vulgaris HOM05D000780 ORTHO05D008187 4.3e-75 285.0 194 74.2
PSO674G0050 Papaver somniferum HOM05D000780 ORTHO05D008187 4.3e-75 285.0 199 75.9
Os02g0815800 Oryza sativa ssp. japonica HOM05D000780 ORTHO05D008187 1.2e-72 276.9 188 75.0
SEGI_35156 Sequoiadendron giganteum HOM05D000780 ORTHO05D008187 7.9e-69 264.2 191 68.1
COL.COLO4_15539 Corchorus olitorius HOM05D000780 ORTHO05D008187 1.3e-68 263.5 162 80.9
BcaB03g15301 Brassica carinata HOM05D000780 ORTHO05D008187 1.2e-64 250.4 164 73.2
Dinv06003 Davidia involucrata HOM05D000780 ORTHO05D008187 7.7e-64 247.7 143 84.6
SalBow1G5753 Salvia bowleyana HOM05D000780 ORTHO05D008187 1.7e-63 246.5 169 75.7
CDE07G0101 Ceratophyllum demersum HOM05D000780 ORTHO05D008187 2.9e-63 245.7 149 80.5
Mapoly0063s0053 Marchantia polymorpha HOM05D000780 ORTHO05D008187 1.1e-62 243.8 191 63.9
SalBow1G8050 Salvia bowleyana HOM05D000780 ORTHO05D008187 3.2e-62 242.3 196 66.3
SMO172G0199 Selaginella moellendorffii HOM05D000780 ORTHO05D008187 4.2e-62 241.9 190 64.2
SGA_v2.0_scaffold62G21470 Striga asiatica HOM05D000780 ORTHO05D008187 1.6e-61 240.0 197 66.5
FAN14G4130 Fragaria x ananassa HOM05D003786 ORTHO05D004375 1.3e-58 230.3 190 63.7
Pp3c22_21010 Physcomitrium patens HOM05D000780 ORTHO05D008187 4.8e-58 228.4 185 63.8
Ah.06g187920 Amaranthus hybridus HOM05D000780 ORTHO05D008187 6.7e-52 208.0 253 51.8
TWI60G0996 Tripterygium wilfordii HOM05D000780 ORTHO05D008187 2.8e-50 202.6 139 75.5
Glyma.20G221600 Glycine max HOM05D000780 ORTHO05D008187 7.7e-48 194.5 126 80.2
ATR0724G057 Amborella trichopoda HOM05D000780 ORTHO05D008187 1.0e-47 194.1 109 88.1
Zm00001eb258800 Zea mays HOM05D000780 ORTHO05D008187 1.9e-46 189.9 138 67.4
DCAR_005521 Daucus carota HOM05D000780 ORTHO05D008187 3.2e-46 189.1 109 84.4
Psat6g127280 Pisum sativum HOM05D000780 ORTHO05D008187 9.4e-46 187.6 141 69.5
SEGI_30710 Sequoiadendron giganteum HOM05D000780 ORTHO05D008187 1.6e-45 186.8 113 81.4
Dinv18279 Davidia involucrata HOM05D000780 ORTHO05D008187 3.6e-45 185.7 121 75.2
MCO11G401 Micromonas commoda HOM05D000780 ORTHO05D008187 5.0e-39 165.2 199 47.7
Cre07.g312750 Chlamydomonas reinhardtii HOM05D000780 ORTHO05D008187 4.2e-38 162.2 189 47.6
QL01p042037 Quercus lobata HOM05D000780 ORTHO05D008187 1.6e-37 160.2 85 92.9
ClCG03G011510 Citrullus lanatus HOM05D000780 ORTHO05D008187 2.1e-37 159.8 115 72.2
Haze_04451 Corylus avellana HOM05D000780 ORTHO05D008187 5.2e-36 155.2 145 57.9
Thecc.07G153800 Theobroma cacao HOM05D000780 ORTHO05D008187 5.7e-35 151.8 105 72.4
AagrBONN_evm.TU.Sc2ySwM_228.3966 Anthoceros agrestis HOM05D000780 ORTHO05D008187 3.8e-31 139.0 140 52.9
MD04G1233000 Malus domestica HOM05D000780 ORTHO05D008187 1.5e-27 127.1 140 56.4
PRCOL_00002874 Prasinoderma coloniale HOM05D000780 ORTHO05D008187 1.9e-22 110.2 132 47.0
Cfa025943 Carpinus fangiana HOM05D000780 ORTHO05D008187 3.3e-22 109.4 197 35.0
Dinv06000 Davidia involucrata HOM05D000780 ORTHO05D008187 3.3e-22 109.4 62 85.5
SalBow1G3250 Salvia bowleyana HOM05D000780 ORTHO05D008187 2.1e-21 106.7 82 61.0
SalBow1G5540 Salvia bowleyana HOM05D000780 ORTHO05D008187 1.3e-18 97.4 84 59.5
Cpa.g.c42374 Carica papaya HOM05D000780 ORTHO05D008187 2.3e-15 86.7 52 78.8
SalBow1G1556 Salvia bowleyana HOM05D000111 ORTHO05D013786 1.5e-11 73.9 109 43.1
SalBow1G6941 Salvia bowleyana HOM05D000780 ORTHO05D008187 2.0e-11 73.6 55 65.5
Psat7g095160 Pisum sativum HOM05D000780 ORTHO05D008187 3.2e-09 66.2 51 62.7


User provided reference genes

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