Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0042817 Camellia sinensis var. sinensis HOM05D004712 ORTHO05D005306 1.2e-197 693.0 337 100.0
Dinv23416 Davidia involucrata HOM05D004712 ORTHO05D005306 1.5e-165 586.3 343 84.0
GSVIVG01035336001 Vitis vinifera HOM05D004712 ORTHO05D005306 8.4e-164 580.5 328 86.3
Prupe.1G416100 Prunus persica HOM05D004712 ORTHO05D005306 1.4e-163 579.7 342 82.5
QL02p001773 Quercus lobata HOM05D004712 ORTHO05D005306 4.3e-160 568.2 343 81.3
TAR624G0834 Trochodendron aralioides HOM05D004712 ORTHO05D005306 7.4e-160 567.4 343 83.1
Ciclev10008867m.g Citrus clementina HOM05D004712 ORTHO05D005306 1.1e-158 563.5 343 82.2
MD08G1074400 Malus domestica HOM05D004712 ORTHO05D005306 1.8e-158 562.8 324 83.6
RcHm_v2.0_Chr6g0310381 Rosa chinensis HOM05D004712 ORTHO05D005306 1.8e-158 562.8 343 79.3
CANSAT25G2372 Cannabis sativa HOM05D004712 ORTHO05D005306 2.4e-158 562.4 341 81.5
CiPaw.15G042700 Carya illinoinensis HOM05D004712 ORTHO05D005306 2.4e-158 562.4 325 83.4
Potri.018G058900 Populus trichocarpa HOM05D004712 ORTHO05D005306 6.9e-158 560.8 344 79.4
Nn6g35377 Nelumbo nucifera HOM05D004712 ORTHO05D005306 9.0e-158 560.5 343 82.2
Atru.chr7.2032 Acer truncatum HOM05D004712 ORTHO05D005306 1.0e-156 557.0 324 83.3
FvH4_2g32310 Fragaria vesca HOM05D004712 ORTHO05D005306 1.3e-156 556.6 340 78.8
Manes.03G046000 Manihot esculenta HOM05D004712 ORTHO05D005306 6.5e-156 554.3 333 80.5
FAN27G0349 Fragaria x ananassa HOM05D004712 ORTHO05D005306 1.9e-155 552.7 340 78.2
Nn6g35381 Nelumbo nucifera HOM05D004712 ORTHO05D005306 2.5e-155 552.4 333 81.7
Migut.A00161 Erythranthe guttata HOM05D004712 ORTHO05D005306 3.2e-155 552.0 340 78.2
FAN20G0488 Fragaria x ananassa HOM05D004712 ORTHO05D005306 3.2e-155 552.0 338 78.7
Thecc.09G050100 Theobroma cacao HOM05D004712 ORTHO05D005306 3.2e-155 552.0 339 79.9
SalBow4G3242 Salvia bowleyana HOM05D004712 ORTHO05D005306 4.2e-155 551.6 339 77.9
FAN24G2925 Fragaria x ananassa HOM05D004712 ORTHO05D005306 7.2e-155 550.8 340 78.5
COL.COLO4_21017 Corchorus olitorius HOM05D004712 ORTHO05D005306 4.6e-154 548.1 322 82.3
HanXRQChr17g0538901 Helianthus annuus HOM05D004712 ORTHO05D005306 6.1e-154 547.7 328 79.6
Potri.006G234000 Populus trichocarpa HOM05D004712 ORTHO05D005306 6.1e-154 547.7 338 78.1
ClCG08G016850 Citrullus lanatus HOM05D004712 ORTHO05D005306 1.8e-153 546.2 341 77.1
Cc08_g10100 Coffea canephora HOM05D004712 ORTHO05D005306 2.3e-153 545.8 340 78.2
CsaV3_2G025770 Cucumis sativus L. HOM05D004712 ORTHO05D005306 3.0e-153 545.4 341 77.1
FAN15G0413 Fragaria x ananassa HOM05D004712 ORTHO05D005306 3.0e-153 545.4 340 77.9
Aqoxy7G03946 Aquilegia oxysepala HOM05D004712 ORTHO05D005306 3.9e-153 545.0 325 80.0
Hma1.2p1_1266F.1_g271360 Hydrangea macrophylla HOM05D004712 ORTHO05D005306 6.7e-153 544.3 311 85.2
Duzib168G2010 Durio zibethinus HOM05D004712 ORTHO05D005306 3.3e-152 542.0 328 80.5
CSS0005003 Camellia sinensis var. sinensis HOM05D004712 ORTHO05D005306 7.4e-152 540.8 324 81.5
Gohir.D05G046000 Gossypium hirsutum HOM05D004712 ORTHO05D005306 1.3e-151 540.0 336 78.0
Lalb_Chr22g0355941 Lupinus albus HOM05D004712 ORTHO05D005306 2.2e-151 539.3 332 77.7
Actinidia21731 Actinidia chinensis HOM05D004712 ORTHO05D005306 2.8e-151 538.9 324 79.6
Sabra18G0050600 Salix brachista HOM05D004712 ORTHO05D005306 2.8e-151 538.9 354 74.3
vmacro05273 Vaccinium macrocarpon HOM05D004712 ORTHO05D005306 3.7e-151 538.5 334 80.5
DCAR_004451 Daucus carota HOM05D004712 ORTHO05D005306 4.8e-151 538.1 345 79.1
Gohir.A05G044400 Gossypium hirsutum HOM05D004712 ORTHO05D005306 4.8e-151 538.1 336 78.0
Hund03367 Selenicereus undatus HOM05D004712 ORTHO05D005306 8.2e-151 537.3 341 77.7
QL05p017273 Quercus lobata HOM05D004712 ORTHO05D005306 1.8e-150 536.2 323 80.2
TWI63G0904 Tripterygium wilfordii HOM05D004712 ORTHO05D005306 1.8e-150 536.2 340 77.4
PSO210G0832 Papaver somniferum HOM05D004712 ORTHO05D005306 3.1e-150 535.4 327 77.7
Haze_18228 Corylus avellana HOM05D004712 ORTHO05D005306 9.1e-150 533.9 341 78.0
PSO210G7282 Papaver somniferum HOM05D004712 ORTHO05D005306 1.5e-149 533.1 327 77.7
AUR62009206 Chenopodium quinoa HOM05D004712 ORTHO05D005306 2.6e-149 532.3 341 76.5
VMungo0647G0552 Vigna mungo HOM05D004712 ORTHO05D005306 3.4e-149 531.9 332 79.8
GSVIVG01016906001 Vitis vinifera HOM05D004712 ORTHO05D005306 3.4e-149 531.9 323 80.2
Sabra06G0182200 Salix brachista HOM05D004712 ORTHO05D005306 4.5e-149 531.6 338 76.0
Glyma.17G231700 Glycine max HOM05D004712 ORTHO05D005306 5.9e-149 531.2 328 78.4
QL05p017569 Quercus lobata HOM05D004712 ORTHO05D005306 5.9e-149 531.2 323 79.9
Glyma.14G091700 Glycine max HOM05D004712 ORTHO05D005306 2.2e-148 529.3 328 78.0
ECA246G0363 Erigeron canadensis HOM05D004712 ORTHO05D005306 8.5e-148 527.3 328 76.8
Sc09g0009600 Simmondsia chinensis HOM05D004712 ORTHO05D005306 8.5e-148 527.3 341 76.5
Duzib150G0899 Durio zibethinus HOM05D004712 ORTHO05D005306 1.4e-147 526.6 336 77.1
Phvul.001G032800 Phaseolus vulgaris HOM05D004712 ORTHO05D005306 1.4e-147 526.6 332 77.1
Lj5g0015176 Lotus japonicus HOM05D004712 ORTHO05D005306 2.5e-147 525.8 329 78.7
THA.LOC104803739 Tarenaya hassleriana HOM05D004712 ORTHO05D005306 7.2e-147 524.2 327 76.8
Cfa017921 Carpinus fangiana HOM05D004712 ORTHO05D005306 6.1e-146 521.2 325 79.1
Peaxi162Scf00840g00117 Petunia axillaris HOM05D004712 ORTHO05D005306 7.9e-146 520.8 324 77.8
Ca_13194_v3 Cicer arietinum L. HOM05D004712 ORTHO05D005306 1.0e-145 520.4 330 76.7
TPR.G13042 Trifolium pratense HOM05D004712 ORTHO05D005306 1.4e-145 520.0 318 77.4
EL10Ac2g03950 Beta vulgaris HOM05D004712 ORTHO05D005306 2.3e-145 519.2 341 74.8
Medtr1g016970 Medicago truncatula HOM05D004712 ORTHO05D005306 6.7e-145 517.7 314 77.7
Solyc08g065880.3 Solanum lycopersicum HOM05D004712 ORTHO05D005306 2.6e-144 515.8 335 73.4
Sopen08g019580 Solanum pennellii HOM05D004712 ORTHO05D005306 3.3e-144 515.4 335 73.4
PGR031G0938 Punica granatum HOM05D004712 ORTHO05D005306 5.7e-144 514.6 324 75.3
BcaB06g29616 Brassica carinata HOM05D004712 ORTHO05D005306 9.7e-144 513.8 325 75.1
Lsat_1_v5_gn_3_27140 Lactuca sativa HOM05D004712 ORTHO05D005306 2.2e-143 512.7 311 77.5
CARHR115280 Cardamine hirsuta HOM05D004712 ORTHO05D005306 2.8e-143 512.3 328 75.3
Sp4g05810 Schrenkiella parvula HOM05D004712 ORTHO05D005306 3.7e-143 511.9 325 75.4
Psat6g019200 Pisum sativum HOM05D004712 ORTHO05D005306 6.3e-143 511.1 314 77.4
A04p20130 Brassica napus HOM05D004712 ORTHO05D005306 8.2e-143 510.8 323 75.2
BraA04t17594Z Brassica rapa HOM05D004712 ORTHO05D005306 8.2e-143 510.8 323 75.2
BcaC02g08320 Brassica carinata HOM05D004712 ORTHO05D005306 1.1e-142 510.4 323 75.2
C04p55830 Brassica napus HOM05D004712 ORTHO05D005306 1.1e-142 510.4 323 75.2
BolC4t27113H Brassica oleracea HOM05D004712 ORTHO05D005306 1.1e-142 510.4 323 75.2
AL4G17960 Arabidopsis lyrata HOM05D004712 ORTHO05D005306 1.4e-142 510.0 326 75.8
MELO3C010771.2 Cucumis melo HOM05D004712 ORTHO05D005306 1.8e-142 509.6 325 74.8
Thhalv10002033m.g Eutrema salsugineum HOM05D004712 ORTHO05D005306 1.8e-142 509.6 325 74.8
Aa31LG5G9770 Aethionema arabicum HOM05D004712 ORTHO05D005306 5.3e-142 508.1 336 74.7
AT2G25910 Arabidopsis thaliana HOM05D004712 ORTHO05D005306 5.3e-142 508.1 325 75.1
Nitab4.5_0000359g0220 Nicotiana tabacum HOM05D004712 ORTHO05D005306 2.2e-140 502.7 322 75.5
ATR0789G022 Amborella trichopoda HOM05D004712 ORTHO05D005306 2.9e-140 502.3 320 74.7
Nitab4.5_0005029g0040 Nicotiana tabacum HOM05D004712 ORTHO05D005306 2.9e-140 502.3 322 75.5
Rhsim08G0230100 Rhododendron simsii HOM05D004712 ORTHO05D005306 5.0e-140 501.5 369 69.4
AUR62040203 Chenopodium quinoa HOM05D004712 ORTHO05D005306 1.5e-139 500.0 341 73.0
Rhsim12G0204300 Rhododendron simsii HOM05D004712 ORTHO05D005306 3.6e-138 495.4 324 75.0
MBI04_g12189_MAGBIO Magnolia biondii HOM05D004712 ORTHO05D005306 4.7e-138 495.0 362 71.5
TWI34G1658 Tripterygium wilfordii HOM05D004712 ORTHO05D005306 9.7e-136 487.3 310 77.1
arahy.Tifrunner.gnm1.ann1.QZ1T53 Arachis hypogaea HOM05D004712 ORTHO05D005306 2.2e-135 486.1 333 71.8
Gorai.009G047400 Gossypium raimondii HOM05D004712 ORTHO05D005306 1.4e-134 483.4 298 78.9
Lj7A695G32 Lonicera japonica HOM05D004712 ORTHO05D005306 2.4e-134 482.6 319 76.2
Nitab4.5_0005661g0020 Nicotiana tabacum HOM05D004712 ORTHO05D005306 4.1e-134 481.9 340 71.2
arahy.Tifrunner.gnm1.ann1.289CQF Arachis hypogaea HOM05D004712 ORTHO05D005306 5.3e-134 481.5 333 71.5
PGSC0003DMG401002514 Solanum tuberosum HOM05D004712 ORTHO05D005306 1.2e-133 480.3 340 69.1
Os01g0566900 Oryza sativa ssp. japonica HOM05D004712 ORTHO05D005306 1.6e-133 479.9 321 70.7
SEGI_23712 Sequoiadendron giganteum HOM05D004712 ORTHO05D005306 1.6e-133 479.9 314 72.9
Gohir.D03G057300 Gossypium hirsutum HOM05D004712 ORTHO05D005306 1.7e-132 476.5 324 69.8
Peaxi162Scf00038g01243 Petunia axillaris HOM05D004712 ORTHO05D005306 2.5e-131 472.6 324 71.9
Gohir.A02G116301 Gossypium hirsutum HOM05D004712 ORTHO05D005306 5.5e-131 471.5 308 71.1
CAN.G20.6 Capsicum annuum HOM05D004712 ORTHO05D005306 7.2e-131 471.1 300 75.0
HPP92_009150 Vanilla planifolia HOM05D004712 ORTHO05D005306 1.6e-130 469.9 327 68.5
MD15G1062100 Malus domestica HOM05D004712 ORTHO05D005306 2.1e-130 469.5 335 70.1
Zm00001eb356940 Zea mays HOM05D004712 ORTHO05D005306 2.7e-130 469.2 338 68.9
Zm00001eb159970 Zea mays HOM05D004712 ORTHO05D005306 3.6e-130 468.8 341 68.3
Ah.10g034640 Amaranthus hybridus HOM05D004712 ORTHO05D005306 1.7e-127 459.9 362 64.6
Sed0015351 Sechium edule HOM05D004712 ORTHO05D005306 1.7e-127 459.9 328 70.4
Eucgr.C00628 Eucalyptus grandis HOM05D004712 ORTHO05D005306 7.0e-126 454.5 267 81.6
Dinv30410 Davidia involucrata HOM05D004712 ORTHO05D005306 2.9e-124 449.1 264 81.8
AUR62031977 Chenopodium quinoa HOM05D004712 ORTHO05D005306 1.9e-123 446.4 304 67.4
AUR62040198 Chenopodium quinoa HOM05D004712 ORTHO05D005306 1.9e-123 446.4 320 70.3
Nitab4.5_0010821g0020 Nicotiana tabacum HOM05D004712 ORTHO05D005306 5.5e-123 444.9 319 69.3
Lj5A50G64 Lonicera japonica HOM05D004712 ORTHO05D005306 6.1e-122 441.4 290 73.8
Solyc03g121250.3 Solanum lycopersicum HOM05D004712 ORTHO05D005306 2.0e-120 436.4 284 73.6
Mapoly0072s0029 Marchantia polymorpha HOM05D004712 ORTHO05D005306 8.3e-119 431.0 318 64.2
AagrBONN_evm.TU.Sc2ySwM_228.3302 Anthoceros agrestis HOM05D004712 ORTHO05D005306 1.7e-116 423.3 307 63.8
Manes.16G077100 Manihot esculenta HOM05D004712 ORTHO05D005306 3.3e-115 419.1 248 82.3
SMO174G0103 Selaginella moellendorffii HOM05D004712 ORTHO05D005306 2.6e-112 409.5 319 61.8
Pp3c15_8210 Physcomitrium patens HOM05D004712 ORTHO05D005306 4.9e-111 405.2 316 61.4
Sopen03g040060 Solanum pennellii HOM05D004712 ORTHO05D005306 7.0e-110 401.4 288 69.1
Sopen01g026340 Solanum pennellii HOM05D000014 ORTHO05D005306 1.2e-109 400.6 302 64.2
vmacro17006 Vaccinium macrocarpon HOM05D004712 ORTHO05D005306 5.9e-109 398.3 390 55.1
Carub.0004s0573 Capsella rubella HOM05D004712 ORTHO05D005306 1.7e-95 353.6 219 76.7
COL.COLO4_30565 Corchorus olitorius HOM05D004712 ORTHO05D005306 4.1e-94 349.0 244 68.9
Glyma.04G087900 Glycine max HOM05D004712 ORTHO05D005306 1.6e-93 347.1 333 57.4
AUR62022272 Chenopodium quinoa HOM05D004712 ORTHO05D005306 2.5e-91 339.7 245 65.3
CAN.G1143.35 Capsicum annuum HOM05D004712 ORTHO05D005306 1.5e-88 330.5 232 69.0
Pp3c9_13080 Physcomitrium patens HOM05D004712 ORTHO05D005306 1.6e-82 310.5 236 62.3
unitig_748.g8268 Utricularia gibba HOM05D004712 ORTHO05D005306 1.1e-81 307.8 302 52.3
unitig_32.g10885 Utricularia gibba HOM05D004712 ORTHO05D005306 2.3e-76 290.0 269 56.1
Solyc01g060200.3 Solanum lycopersicum HOM05D004712 ORTHO05D005306 8.1e-74 281.6 305 49.8
Cpa.g.sc1834.1 Carica papaya HOM05D004712 ORTHO05D005306 1.1e-70 271.2 160 80.6
CDE06G1081 Ceratophyllum demersum HOM05D004712 ORTHO05D005306 2.1e-69 266.9 169 74.0
SGA_v2.0_scaffold88G27214 Striga asiatica HOM05D004712 ORTHO05D005306 6.7e-60 235.3 143 77.6
Gorai.003G060400 Gossypium raimondii HOM05D004712 ORTHO05D005306 4.3e-59 232.6 170 68.2
Cpa.g.c30793.3 Carica papaya HOM05D004712 ORTHO05D005306 1.4e-57 227.6 195 62.6
CDE06G1637 Ceratophyllum demersum HOM05D004712 ORTHO05D005306 1.9e-51 207.2 129 78.3
Glyma.20G062400 Glycine max HOM05D004712 ORTHO05D005306 3.3e-35 153.3 96 77.1
ATR0626G141 Amborella trichopoda HOM05D004712 ORTHO05D005306 9.4e-30 135.2 170 47.1
Cpa.g.sc131.9 Carica papaya HOM05D004712 ORTHO05D005306 6.5e-23 112.5 75 64.0
Cpa.g.sc131.11 Carica papaya HOM05D004712 ORTHO05D005306 1.5e-22 111.3 65 80.0
Cpa.g.sc131.8 Carica papaya HOM05D004712 ORTHO05D005306 1.2e-21 108.2 77 68.8
Hma1.2p1_0051F.1_g029750 Hydrangea macrophylla HOM05D004712 ORTHO05D005306 3.6e-21 106.7 67 76.1
TAR636G2080 Trochodendron aralioides HOM05D000850 ORTHO05D000266 6.7e-20 102.4 80 71.2
Cc04_g02330 Coffea canephora HOM05D004712 ORTHO05D005306 8.2e-18 95.5 155 39.4
COL.COLO4_30564 Corchorus olitorius HOM05D004712 ORTHO05D005306 7.7e-16 89.0 55 74.5
MSTRG.22613 Avicennia marina HOM05D004712 ORTHO05D005306 7.2e-14 82.4 76 55.3
Cre03.g152425 Chlamydomonas reinhardtii HOM05D004712 ORTHO05D005306 5.7e-11 72.8 209 26.8
Nn4g24691 Nelumbo nucifera HOM05D004712 ORTHO05D005306 1.7e-10 71.2 41 73.2
EL10Ac9g21163 Beta vulgaris HOM05D004712 ORTHO05D005306 7.0e-09 65.9 78 47.4
MCO15G238 Micromonas commoda HOM05D015906 ORTHO05D005306 7.7e-08 62.4 96 35.4
Cre03.g205921 Chlamydomonas reinhardtii HOM05D015906 ORTHO05D005306 1.5e-06 58.2 214 26.2
FAN23G2178 Fragaria x ananassa HOM05D002024 ORTHO05D004352 9.5e-06 55.5 156 26.9


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