Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0041674 Camellia sinensis var. sinensis HOM05D001734 ORTHO05D033929 1.4e-107 392.9 192 100.0
CSS0000775 Camellia sinensis var. sinensis HOM05D001734 ORTHO05D033929 7.3e-88 327.4 196 86.7
Actinidia19322 Actinidia chinensis HOM05D001734 ORTHO05D003483 3.6e-42 175.6 144 66.0
Dinv20652 Davidia involucrata HOM05D001734 ORTHO05D003483 1.1e-38 164.1 144 62.5
Haze_07473 Corylus avellana HOM05D001734 ORTHO05D003483 9.4e-35 151.0 145 55.9
RcHm_v2.0_Chr6g0271131 Rosa chinensis HOM05D001734 ORTHO05D003483 6.7e-33 144.8 144 52.8
QL10p011601 Quercus lobata HOM05D001734 ORTHO05D003483 1.2e-32 144.1 144 54.9
TAR629G1256 Trochodendron aralioides HOM05D001734 ORTHO05D003483 2.0e-32 143.3 145 55.2
MD06G1173700 Malus domestica HOM05D001734 ORTHO05D003483 2.6e-32 142.9 144 52.1
CiPaw.11G026100 Carya illinoinensis HOM05D001734 ORTHO05D003483 9.7e-32 141.0 144 52.8
Duzib084G0583 Durio zibethinus HOM05D001734 ORTHO05D003483 1.1e-30 137.5 144 51.4
COL.COLO4_30039 Corchorus olitorius HOM05D001734 ORTHO05D003483 1.8e-30 136.7 144 52.1
Prupe.5G173600 Prunus persica HOM05D001734 ORTHO05D003483 2.4e-30 136.3 144 50.7
Thecc.03G012800 Theobroma cacao HOM05D001734 ORTHO05D003483 9.1e-30 134.4 144 50.7
Potri.015G076650 Populus trichocarpa HOM05D001734 ORTHO05D003483 1.6e-29 133.7 144 50.0
Sabra15G0101700 Salix brachista HOM05D001734 ORTHO05D003483 2.0e-29 133.3 144 49.3
Cfa019134 Carpinus fangiana HOM05D001734 ORTHO05D003483 5.9e-29 131.7 118 60.2
Cpa.g.sc76.53 Carica papaya HOM05D001734 ORTHO05D003483 1.3e-28 130.6 144 50.7
PSO063G0326 Papaver somniferum HOM05D001734 ORTHO05D003483 2.2e-28 129.8 145 49.7
Atru.chr9.2479 Acer truncatum HOM05D001734 ORTHO05D003483 6.5e-28 128.3 144 51.4
Manes.06G105000 Manihot esculenta HOM05D001734 ORTHO05D003483 6.5e-28 128.3 144 48.6
FvH4_2g11670 Fragaria vesca HOM05D001734 ORTHO05D003483 8.5e-28 127.9 146 47.9
vmacro19388 Vaccinium macrocarpon HOM05D001734 ORTHO05D003483 8.5e-28 127.9 110 61.8
FAN05G4580 Fragaria x ananassa HOM05D001734 ORTHO05D003483 1.1e-27 127.5 146 47.3
CANSAT80G1574 Cannabis sativa HOM05D001734 ORTHO05D003483 1.9e-27 126.7 147 49.0
Lsat_1_v5_gn_1_27061 Lactuca sativa HOM05D001734 ORTHO05D003483 1.9e-27 126.7 145 46.9
PSO063G7150 Papaver somniferum HOM05D001734 ORTHO05D003483 1.9e-27 126.7 145 49.0
Gorai.006G189100 Gossypium raimondii HOM05D001734 ORTHO05D003483 2.5e-27 126.3 141 48.9
HanXRQChr02g0036361 Helianthus annuus HOM05D001734 ORTHO05D003483 4.2e-27 125.6 144 47.9
FAN15G3378 Fragaria x ananassa HOM05D001734 ORTHO05D003483 5.5e-27 125.2 146 47.3
Gohir.A09G171700 Gossypium hirsutum HOM05D001734 ORTHO05D003483 7.2e-27 124.8 141 48.9
Psat5g114800 Pisum sativum HOM05D001734 ORTHO05D003483 9.4e-27 124.4 163 44.8
TWI14G0283 Tripterygium wilfordii HOM05D001734 ORTHO05D003483 1.6e-26 123.6 170 41.8
Sc04g0001800 Simmondsia chinensis HOM05D001734 ORTHO05D003483 3.6e-26 122.5 144 47.9
Gohir.D09G167401 Gossypium hirsutum HOM05D001734 ORTHO05D003483 6.1e-26 121.7 141 48.2
Hund02744 Selenicereus undatus HOM05D001734 ORTHO05D003483 1.0e-25 120.9 144 46.5
Eucgr.K02842 Eucalyptus grandis HOM05D001734 ORTHO05D003483 3.0e-25 119.4 144 46.5
Ca_16176_v3 Cicer arietinum L. HOM05D001734 ORTHO05D003483 2.0e-24 116.7 163 42.9
Nn4g22757 Nelumbo nucifera HOM05D001734 ORTHO05D003483 4.4e-24 115.5 145 42.8
Lj1g0011912 Lotus japonicus HOM05D001734 ORTHO05D003483 2.8e-23 112.8 163 40.5
Aqoxy3G02937 Aquilegia oxysepala HOM05D001734 ORTHO05D003483 3.7e-23 112.5 144 45.1
Medtr3g077860 Medicago truncatula HOM05D001734 ORTHO05D003483 4.8e-23 112.1 165 43.0
Lalb_Chr08g0236501 Lupinus albus HOM05D001734 ORTHO05D003483 6.3e-23 111.7 146 44.5
GSVIVG01007755001 Vitis vinifera HOM05D001734 ORTHO05D003483 1.8e-22 110.2 99 62.6
Glyma.04G182900 Glycine max HOM05D001734 ORTHO05D003483 5.4e-22 108.6 146 43.8
PGR044G0033 Punica granatum HOM05D001734 ORTHO05D003483 5.4e-22 108.6 144 43.8
MELO3C017087.2 Cucumis melo HOM05D001734 ORTHO05D003483 1.2e-21 107.5 146 42.5
DCAR_026136 Daucus carota HOM05D001734 ORTHO05D003483 2.0e-21 106.7 144 46.5
arahy.Tifrunner.gnm1.ann1.2D0TBT Arachis hypogaea HOM05D001734 ORTHO05D003483 2.7e-21 106.3 181 36.5
Phvul.009G178400 Phaseolus vulgaris HOM05D001734 ORTHO05D003483 3.5e-21 105.9 146 44.5
Ciclev10018427m.g Citrus clementina HOM05D001734 ORTHO05D003483 7.7e-21 104.8 151 43.7
THA.LOC104818218 Tarenaya hassleriana HOM05D001734 ORTHO05D003483 7.7e-21 104.8 144 42.4
ECA247G1446 Erigeron canadensis HOM05D001734 ORTHO05D003483 1.3e-20 104.0 144 43.1
HPP92_004868 Vanilla planifolia HOM05D001734 ORTHO05D003483 1.7e-20 103.6 144 38.2
A06p27460 Brassica napus HOM05D001734 ORTHO05D003483 2.3e-20 103.2 144 42.4
C03p66700 Brassica napus HOM05D001734 ORTHO05D003483 2.3e-20 103.2 144 42.4
BolC3t18938H Brassica oleracea HOM05D001734 ORTHO05D003483 2.3e-20 103.2 144 42.4
BraA06t25686Z Brassica rapa HOM05D001734 ORTHO05D003483 2.3e-20 103.2 144 42.4
CsaV3_1G001470 Cucumis sativus L. HOM05D001734 ORTHO05D003483 2.3e-20 103.2 147 42.2
ClCG06G017040 Citrullus lanatus HOM05D001734 ORTHO05D003483 3.8e-20 102.4 145 40.7
Oeu016387.4 Olea europaea HOM05D001734 ORTHO05D003483 3.8e-20 102.4 149 44.3
Sed0023277 Sechium edule HOM05D001734 ORTHO05D003483 5.0e-20 102.1 147 42.2
Solyc03g112950.4 Solanum lycopersicum HOM05D001734 ORTHO05D003483 5.0e-20 102.1 140 42.9
SGA_v2.0_scaffold90G27914 Striga asiatica HOM05D001734 ORTHO05D003483 5.0e-20 102.1 147 43.5
arahy.Tifrunner.gnm1.ann1.0L1HI6 Arachis hypogaea HOM05D001734 ORTHO05D003483 8.6e-20 101.3 165 38.2
Sopen03g032020 Solanum pennellii HOM05D001734 ORTHO05D003483 1.9e-19 100.1 140 42.1
VMungo1309G1151 Vigna mungo HOM05D001734 ORTHO05D003483 1.9e-19 100.1 147 40.1
AUR62008208 Chenopodium quinoa HOM05D001734 ORTHO05D003483 2.5e-19 99.8 144 43.8
EL10Ac5g10743 Beta vulgaris HOM05D001734 ORTHO05D003483 3.3e-19 99.4 144 43.8
AUR62030960 Chenopodium quinoa HOM05D001734 ORTHO05D003483 4.2e-19 99.0 145 42.8
Migut.I00009 Erythranthe guttata HOM05D001734 ORTHO05D003483 4.2e-19 99.0 166 38.6
Thhalv10010050m.g Eutrema salsugineum HOM05D001734 ORTHO05D003483 4.2e-19 99.0 144 42.4
CARHR156920 Cardamine hirsuta HOM05D001734 ORTHO05D003483 5.5e-19 98.6 145 40.0
Aa31LG4G16790 Aethionema arabicum HOM05D001734 ORTHO05D003483 1.2e-18 97.4 144 41.7
AT3G48190 Arabidopsis thaliana HOM05D001734 ORTHO05D003483 1.2e-18 97.4 144 39.6
Sp5g13840 Schrenkiella parvula HOM05D001734 ORTHO05D003483 2.1e-18 96.7 144 42.4
Nitab4.5_0000984g0090 Nicotiana tabacum HOM05D001734 ORTHO05D003483 2.8e-18 96.3 144 43.1
AL5G27530 Arabidopsis lyrata HOM05D001734 ORTHO05D003483 4.7e-18 95.5 144 39.6
SalBow5G1563 Salvia bowleyana HOM05D001734 ORTHO05D003483 4.7e-18 95.5 165 41.2
Peaxi162Scf00009g00114 Petunia axillaris HOM05D001734 ORTHO05D003483 6.1e-18 95.1 140 41.4
Carub.0005s1431 Capsella rubella HOM05D001734 ORTHO05D003483 5.2e-17 92.0 144 39.6
MSTRG.11455 Avicennia marina HOM05D001734 ORTHO05D003483 2.6e-16 89.7 144 42.4
CDE07G1059 Ceratophyllum demersum HOM05D001734 ORTHO05D003483 7.5e-16 88.2 147 36.7
CAN.G1305.19 Capsicum annuum HOM05D001734 ORTHO05D003483 1.3e-15 87.4 140 40.0
ATR0730G231 Amborella trichopoda HOM05D001734 ORTHO05D003483 6.3e-15 85.1 164 31.7
SEGI_29837 Sequoiadendron giganteum HOM05D001734 ORTHO05D003483 5.9e-13 78.6 146 33.6
Os01g0106700 Oryza sativa ssp. japonica HOM05D001734 ORTHO05D003483 6.6e-12 75.1 142 31.0
Zm00001eb126710 Zea mays HOM05D001734 ORTHO05D003483 1.1e-11 74.3 146 33.6
FAN20G1174 Fragaria x ananassa HOM05D001734 ORTHO05D003483 1.9e-11 73.6 66 53.0
SHI17000 Sapria himalayana HOM05D001734 ORTHO05D033929 3.3e-11 72.8 196 31.1
FAN24G1896 Fragaria x ananassa HOM05D001734 ORTHO05D003483 7.3e-11 71.6 66 51.5
Nitab4.5_0000785g0010 Nicotiana tabacum HOM05D001734 ORTHO05D003483 4.7e-10 68.9 140 32.9
FAN20G1266 Fragaria x ananassa HOM05D001734 ORTHO05D003483 3.1e-09 66.2 66 51.5
unitig_0.g1441 Utricularia gibba HOM05D001734 ORTHO05D003483 5.2e-09 65.5 125 35.2
TPR.G6034 Trifolium pratense HOM05D001734 ORTHO05D003483 4.1e-06 55.8 60 45.0


User provided reference genes

Program Settings