Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0036813 Camellia sinensis var. sinensis HOM05D005330 ORTHO05D006489 1.6e-62 242.7 133 100.0
vmacro15037 Vaccinium macrocarpon HOM05D005330 ORTHO05D006489 2.0e-39 166.0 127 70.1
Rhsim08G0239400 Rhododendron simsii HOM05D005330 ORTHO05D006489 7.4e-39 164.1 128 71.1
Actinidia32189 Actinidia chinensis HOM05D005330 ORTHO05D006489 1.7e-38 162.9 127 68.5
Actinidia21791 Actinidia chinensis HOM05D005330 ORTHO05D006489 2.8e-38 162.2 127 70.1
Dinv20432 Davidia involucrata HOM05D005330 ORTHO05D006489 1.1e-37 160.2 128 69.5
Solyc12g049330.2 Solanum lycopersicum HOM05D005330 ORTHO05D006489 4.1e-37 158.3 127 68.5
Cc04_g01320 Coffea canephora HOM05D005330 ORTHO05D006489 1.6e-36 156.4 131 70.2
GSVIVG01016752001 Vitis vinifera HOM05D005330 ORTHO05D006489 3.5e-36 155.2 127 64.6
Sopen12g023810 Solanum pennellii HOM05D005330 ORTHO05D006489 5.9e-36 154.5 127 66.9
Nitab4.5_0001199g0030 Nicotiana tabacum HOM05D005330 ORTHO05D006489 5.5e-34 147.9 128 65.6
HanXRQChr12g0360301 Helianthus annuus HOM05D005330 ORTHO05D006489 6.1e-33 144.4 127 62.2
HanXRQChr12g0360351 Helianthus annuus HOM05D005330 ORTHO05D006489 6.1e-33 144.4 127 62.2
DCAR_022693 Daucus carota HOM05D005330 ORTHO05D006489 8.0e-33 144.1 128 67.2
Lj5A36G79 Lonicera japonica HOM05D005330 ORTHO05D006489 8.0e-33 144.1 119 67.2
Nitab4.5_0000189g0150 Nicotiana tabacum HOM05D005330 ORTHO05D006489 1.4e-32 143.3 128 64.1
Lsat_1_v5_gn_5_136241 Lactuca sativa HOM05D005330 ORTHO05D006489 2.3e-32 142.5 127 63.8
HanXRQChr12g0360331 Helianthus annuus HOM05D005330 ORTHO05D006489 8.8e-32 140.6 130 60.8
Nn6g34611 Nelumbo nucifera HOM05D005330 ORTHO05D006489 1.5e-31 139.8 131 58.8
Oeu015485.2 Olea europaea HOM05D005330 ORTHO05D006489 2.0e-31 139.4 139 60.4
Manes.11G019800 Manihot esculenta HOM05D005330 ORTHO05D006489 2.6e-31 139.0 131 60.3
CiPaw.01G218300 Carya illinoinensis HOM05D005330 ORTHO05D006489 7.5e-31 137.5 127 58.3
Glyma.18G149800 Glycine max HOM05D005330 ORTHO05D006489 7.5e-31 137.5 127 63.0
Cfa003530 Carpinus fangiana HOM05D005330 ORTHO05D006489 1.7e-30 136.3 127 61.4
Haze_16035 Corylus avellana HOM05D005330 ORTHO05D006489 1.7e-30 136.3 127 61.4
Sc10g0007910 Simmondsia chinensis HOM05D005330 ORTHO05D006489 1.7e-30 136.3 127 62.2
TWI79G1442 Tripterygium wilfordii HOM05D005330 ORTHO05D006489 1.7e-30 136.3 128 61.7
VMungo0331G1542 Vigna mungo HOM05D005330 ORTHO05D006489 2.8e-30 135.6 127 58.3
Eucgr.F04419 Eucalyptus grandis HOM05D005330 ORTHO05D006489 3.7e-30 135.2 131 61.8
Hma1.2p1_0686F.1_g203410 Hydrangea macrophylla HOM05D005330 ORTHO05D006489 3.7e-30 135.2 127 62.2
Lalb_Chr04g0263541 Lupinus albus HOM05D005330 ORTHO05D006489 3.7e-30 135.2 127 59.1
PGR119G1300 Punica granatum HOM05D005330 ORTHO05D006489 4.8e-30 134.8 131 58.0
Hund05737 Selenicereus undatus HOM05D005330 ORTHO05D006489 4.8e-30 134.8 127 58.3
Phvul.010G129300 Phaseolus vulgaris HOM05D005330 ORTHO05D006489 8.3e-30 134.0 127 59.8
Peaxi162Scf00177g00417 Petunia axillaris HOM05D005330 ORTHO05D006489 2.4e-29 132.5 126 59.5
TWI31G1192 Tripterygium wilfordii HOM05D005330 ORTHO05D006489 3.1e-29 132.1 128 60.2
Cpa.g.sc25.125 Carica papaya HOM05D005330 ORTHO05D006489 4.1e-29 131.7 129 59.7
PGSC0003DMG400014100 Solanum tuberosum HOM05D005330 ORTHO05D006489 7.0e-29 131.0 112 63.4
Medtr8g020850 Medicago truncatula HOM05D005330 ORTHO05D006489 9.1e-29 130.6 127 57.5
Glyma.16G008300 Glycine max HOM05D005330 ORTHO05D006489 2.0e-28 129.4 127 54.3
Lj3g0015373 Lotus japonicus HOM05D005330 ORTHO05D006489 2.0e-28 129.4 127 55.9
Thecc.06G120800 Theobroma cacao HOM05D005330 ORTHO05D006489 2.7e-28 129.0 128 57.0
Ca_23387_v3 Cicer arietinum L. HOM05D005330 ORTHO05D006489 4.5e-28 128.3 127 58.3
arahy.Tifrunner.gnm1.ann1.K577WU Arachis hypogaea HOM05D005330 ORTHO05D006489 1.0e-27 127.1 127 55.1
Glyma.03G080300 Glycine max HOM05D005330 ORTHO05D006489 1.3e-27 126.7 128 58.6
Prupe.3G040200 Prunus persica HOM05D005330 ORTHO05D006489 2.9e-27 125.6 127 54.3
arahy.Tifrunner.gnm1.ann1.RX87J0 Arachis hypogaea HOM05D005330 ORTHO05D006489 3.8e-27 125.2 127 54.3
Sed0026793 Sechium edule HOM05D005330 ORTHO05D006489 8.5e-27 124.0 127 54.3
EL10Ac7g16412 Beta vulgaris HOM05D005330 ORTHO05D006489 4.2e-26 121.7 128 53.1
AUR62001479 Chenopodium quinoa HOM05D005330 ORTHO05D006489 4.2e-26 121.7 128 55.5
QL05p004250 Quercus lobata HOM05D005330 ORTHO05D006489 4.2e-26 121.7 127 56.7
AUR62009886 Chenopodium quinoa HOM05D005330 ORTHO05D006489 7.2e-26 120.9 127 55.1
Psat0s741g0240 Pisum sativum HOM05D005330 ORTHO05D006489 7.2e-26 120.9 127 54.3
Hund18689 Selenicereus undatus HOM05D005330 ORTHO05D006489 7.2e-26 120.9 119 56.3
Potri.003G065500 Populus trichocarpa HOM05D005330 ORTHO05D006489 2.1e-25 119.4 126 60.3
Sabra03G0038500 Salix brachista HOM05D005330 ORTHO05D006489 2.1e-25 119.4 126 57.9
Duzib160G0528 Durio zibethinus HOM05D005330 ORTHO05D006489 3.6e-25 118.6 128 50.8
SGA_v2.0_scaffold71G23853 Striga asiatica HOM05D005330 ORTHO05D006489 6.1e-25 117.9 138 50.7
Gohir.A10G053500 Gossypium hirsutum HOM05D005330 ORTHO05D006489 8.0e-25 117.5 128 53.9
ClCG09G000970 Citrullus lanatus HOM05D005330 ORTHO05D006489 1.8e-24 116.3 127 51.2
MELO3C024354.2 Cucumis melo HOM05D005330 ORTHO05D006489 1.8e-24 116.3 127 51.2
Migut.I01076 Erythranthe guttata HOM05D005330 ORTHO05D006489 1.8e-24 116.3 139 51.1
Gohir.D10G055300 Gossypium hirsutum HOM05D005330 ORTHO05D006489 1.8e-24 116.3 128 53.1
Gorai.011G059000 Gossypium raimondii HOM05D005330 ORTHO05D006489 1.8e-24 116.3 128 53.1
COL.COLO4_30752 Corchorus olitorius HOM05D005330 ORTHO05D006489 8.8e-24 114.0 129 53.5
Ah.08g216810 Amaranthus hybridus HOM05D005330 ORTHO05D006489 2.0e-23 112.8 129 52.7
Atru.chr1.3994 Acer truncatum HOM05D005330 ORTHO05D006489 4.4e-23 111.7 132 53.8
SGA_v2.0_scaffold122G33335 Striga asiatica HOM05D005330 ORTHO05D006489 5.7e-23 111.3 138 49.3
CsaV3_7G034470 Cucumis sativus L. HOM05D005330 ORTHO05D006489 1.3e-22 110.2 127 50.4
DCAR_016124 Daucus carota HOM05D005330 ORTHO05D006489 1.3e-22 110.2 125 59.2
Hma1.2p1_0291F.1_g115070 Hydrangea macrophylla HOM05D005330 ORTHO05D006489 1.3e-22 110.2 124 54.8
SalBow6G0331 Salvia bowleyana HOM05D005330 ORTHO05D006489 3.7e-22 108.6 136 48.5
SalBow6G0719 Salvia bowleyana HOM05D005330 ORTHO05D006489 3.7e-22 108.6 136 48.5
Oeu020346.1 Olea europaea HOM05D005330 ORTHO05D006489 3.1e-21 105.5 134 52.2
Potri.001G168700 Populus trichocarpa HOM05D005330 ORTHO05D006489 4.1e-21 105.1 126 54.0
Sed0005660 Sechium edule HOM05D005330 ORTHO05D006489 4.1e-21 105.1 127 45.7
CARHR044500 Cardamine hirsuta HOM05D005330 ORTHO05D006489 5.4e-21 104.8 131 45.8
BcaC01g01438 Brassica carinata HOM05D005330 ORTHO05D006489 7.0e-21 104.4 128 45.3
C03p92030 Brassica napus HOM05D005330 ORTHO05D006489 7.0e-21 104.4 128 45.3
MD09G1182700 Malus domestica HOM05D005330 ORTHO05D006489 9.1e-21 104.0 126 47.6
Atru.chr1.3993 Acer truncatum HOM05D005330 ORTHO05D006489 2.0e-20 102.8 132 51.5
BraA08t32169Z Brassica rapa HOM05D005330 ORTHO05D006489 2.7e-20 102.4 127 44.9
Aa31LG10G1260 Aethionema arabicum HOM05D005330 ORTHO05D006489 4.5e-20 101.7 131 45.8
BcaB04g17020 Brassica carinata HOM05D005330 ORTHO05D006489 5.9e-20 101.3 127 45.7
BolC3t21521H Brassica oleracea HOM05D005330 ORTHO05D006489 7.7e-20 100.9 128 44.5
Ciclev10025803m.g Citrus clementina HOM05D005330 ORTHO05D006489 1.0e-19 100.5 129 51.2
A08p01180 Brassica napus HOM05D005330 ORTHO05D006489 2.9e-19 99.0 128 43.0
Sp1g40600 Schrenkiella parvula HOM05D005330 ORTHO05D006489 3.8e-19 98.6 129 43.4
THA.LOC104810366 Tarenaya hassleriana HOM05D005330 ORTHO05D006489 5.0e-19 98.2 129 45.7
MD09G1182600 Malus domestica HOM05D005330 ORTHO05D006489 1.1e-18 97.1 113 49.6
ATR0598G333 Amborella trichopoda HOM05D005330 ORTHO05D006489 2.5e-18 95.9 127 47.2
BcaC08g43595 Brassica carinata HOM05D005330 ORTHO05D006489 2.5e-18 95.9 126 42.9
C06p09930 Brassica napus HOM05D005330 ORTHO05D006489 2.5e-18 95.9 126 42.9
BolC6t36066H Brassica oleracea HOM05D005330 ORTHO05D006489 2.5e-18 95.9 126 42.9
AL1G62870 Arabidopsis lyrata HOM05D005330 ORTHO05D006489 5.5e-18 94.7 127 45.7
AT1G54150 Arabidopsis thaliana HOM05D005330 ORTHO05D006489 7.2e-18 94.4 129 43.4
Carub.0001s4339 Capsella rubella HOM05D005330 ORTHO05D006489 7.2e-18 94.4 130 45.4
Thhalv10011564m.g Eutrema salsugineum HOM05D005330 ORTHO05D006489 2.1e-17 92.8 131 44.3
HPP92_013292 Vanilla planifolia HOM05D005330 ORTHO05D006489 8.0e-17 90.9 128 42.2
MD09G1182800 Malus domestica HOM05D005330 ORTHO05D006489 1.8e-16 89.7 127 43.3
Aqoxy2G00145 Aquilegia oxysepala HOM05D005330 ORTHO05D006489 3.0e-16 89.0 136 39.7
BcaB07g33256 Brassica carinata HOM05D005330 ORTHO05D006489 6.8e-16 87.8 130 43.1
A06p00510 Brassica napus HOM05D005330 ORTHO05D006489 8.9e-16 87.4 129 42.6
BraA06t23266Z Brassica rapa HOM05D005330 ORTHO05D006489 8.9e-16 87.4 129 42.6
ECA234G4612 Erigeron canadensis HOM05D005330 ORTHO05D006489 8.9e-16 87.4 126 46.0
RcHm_v2.0_Chr2g0145651 Rosa chinensis HOM05D005330 ORTHO05D006489 8.9e-16 87.4 131 43.5
PSO135G0621 Papaver somniferum HOM05D005330 ORTHO05D006489 4.4e-15 85.1 133 44.4
PSO135G0922 Papaver somniferum HOM05D005330 ORTHO05D006489 1.3e-14 83.6 109 43.1
FAN05G5341 Fragaria x ananassa HOM05D005330 ORTHO05D006489 4.9e-14 81.6 131 40.5
PSO724G1321 Papaver somniferum HOM05D005330 ORTHO05D006489 1.1e-13 80.5 142 40.8
SEGI_21309 Sequoiadendron giganteum HOM05D005330 ORTHO05D006489 9.2e-13 77.4 127 40.9
FvH4_6g34790 Fragaria vesca HOM05D005330 ORTHO05D006489 2.0e-12 76.3 131 38.9
MD02G1089500 Malus domestica HOM05D005330 ORTHO05D006489 4.5e-12 75.1 125 39.2
Mapoly0002s0144 Marchantia polymorpha HOM05D005330 ORTHO05D006489 2.5e-10 69.3 156 32.7
PSO135G0120 Papaver somniferum HOM05D005330 ORTHO05D006489 1.2e-09 67.0 109 40.4
AagrBONN_evm.TU.Sc2ySwM_228.1646 Anthoceros agrestis HOM05D005330 ORTHO05D006489 2.1e-09 66.2 151 31.8
Os03g0177300 Oryza sativa ssp. japonica HOM05D005330 ORTHO05D006489 2.8e-09 65.9 127 38.6
SMO118G0169 Selaginella moellendorffii HOM05D005330 ORTHO05D006489 2.0e-07 59.7 127 33.1
Aqoxy3G00203 Aquilegia oxysepala HOM05D005330 ORTHO05D006489 1.3e-06 57.0 113 31.0
CDE05G1829 Ceratophyllum demersum HOM05D005330 ORTHO05D006489 2.9e-06 55.8 46 52.2
Lsat_1_v5_gn_5_136301 Lactuca sativa HOM05D005330 ORTHO05D006489 8.3e-06 54.3 59 49.2


User provided reference genes

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