Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0031271 Camellia sinensis var. sinensis HOM05D003451 ORTHO05D003918 9.0e-26 119.4 57 100.0
CSS0010909 Camellia sinensis var. sinensis HOM05D003451 ORTHO05D003918 1.9e-20 101.7 65 81.5
CSS0000811 Camellia sinensis var. sinensis HOM05D003451 ORTHO05D003918 2.2e-19 98.2 65 80.0
CSS0021964 Camellia sinensis var. sinensis HOM05D003451 ORTHO05D003918 2.2e-19 98.2 88 62.5
CSS0015848 Camellia sinensis var. sinensis HOM05D003451 ORTHO05D003918 5.0e-16 87.0 43 93.0
CSS0020415 Camellia sinensis var. sinensis HOM05D003451 ORTHO05D003918 2.5e-15 84.7 43 90.7
CSS0003600 Camellia sinensis var. sinensis HOM05D003451 ORTHO05D003918 3.2e-15 84.3 40 97.5
CSS0014106 Camellia sinensis var. sinensis HOM05D003451 ORTHO05D003918 3.2e-15 84.3 40 97.5
Actinidia11670 Actinidia chinensis HOM05D003451 ORTHO05D003918 4.6e-14 80.5 40 90.0
CSS0013826 Camellia sinensis var. sinensis HOM05D003451 ORTHO05D003918 1.0e-13 79.3 40 90.0
SalBow6G3934 Salvia bowleyana HOM05D003451 ORTHO05D003918 1.8e-13 78.6 43 79.1
vmacro04126 Vaccinium macrocarpon HOM05D003451 ORTHO05D003918 3.0e-13 77.8 39 89.7
Actinidia06925 Actinidia chinensis HOM05D003451 ORTHO05D003918 8.8e-13 76.3 40 85.0
MSTRG.12458 Avicennia marina HOM05D003451 ORTHO05D003918 1.9e-12 75.1 39 84.6
Nitab4.5_0000159g0090 Nicotiana tabacum HOM05D003451 ORTHO05D003918 2.5e-12 74.7 43 76.7
Nitab4.5_0000531g0010 Nicotiana tabacum HOM05D003451 ORTHO05D003918 2.5e-12 74.7 43 76.7
Oeu001483.1 Olea europaea HOM05D003451 ORTHO05D003918 4.3e-12 73.9 40 85.0
SalBow1G0548 Salvia bowleyana HOM05D003451 ORTHO05D003918 4.3e-12 73.9 39 82.1
SalBow1G0865 Salvia bowleyana HOM05D003451 ORTHO05D003918 4.3e-12 73.9 39 82.1
SalBow1G4695 Salvia bowleyana HOM05D003451 ORTHO05D003918 4.3e-12 73.9 39 82.1
Migut.D00628 Erythranthe guttata HOM05D003451 ORTHO05D003918 9.7e-12 72.8 40 82.5
Solyc06g065470.4 Solanum lycopersicum HOM05D003451 ORTHO05D003918 1.3e-11 72.4 40 77.5
MSTRG.17605 Avicennia marina HOM05D003451 ORTHO05D003918 2.2e-11 71.6 39 79.5
Sopen06g023960 Solanum pennellii HOM05D003451 ORTHO05D003918 2.2e-11 71.6 40 77.5
PGSC0003DMG400026119 Solanum tuberosum HOM05D003451 ORTHO05D003918 2.2e-11 71.6 40 77.5
Hma1.2p1_0390F.1_g142550 Hydrangea macrophylla HOM05D003451 ORTHO05D003918 2.8e-11 71.2 40 77.5
Rhsim01G0192600 Rhododendron simsii HOM05D003451 ORTHO05D003918 2.8e-11 71.2 42 76.2
CSS0010395 Camellia sinensis var. sinensis HOM05D003451 ORTHO05D003918 8.2e-11 69.7 36 88.9
Nitab4.5_0003158g0010 Nicotiana tabacum HOM05D003451 ORTHO05D003918 8.2e-11 69.7 42 71.4
Dinv22160 Davidia involucrata HOM05D003451 ORTHO05D003918 1.1e-10 69.3 39 79.5
Peaxi162Scf00268g01431 Petunia axillaris HOM05D003451 ORTHO05D003918 1.1e-10 69.3 40 75.0
Migut.N02344 Erythranthe guttata HOM05D003451 ORTHO05D003918 1.8e-10 68.6 39 74.4
HanXRQChr13g0401231 Helianthus annuus HOM05D003451 ORTHO05D003918 1.8e-10 68.6 40 75.0
SGA_v2.0_scaffold3G01477 Striga asiatica HOM05D003451 ORTHO05D003918 1.8e-10 68.6 41 73.2
unitig_699.g19138 Utricularia gibba HOM05D003451 ORTHO05D003918 1.8e-10 68.6 41 73.2
GSVIVG01026504001 Vitis vinifera HOM05D003451 ORTHO05D003918 1.8e-10 68.6 40 77.5
Nn7g36360 Nelumbo nucifera HOM05D003451 ORTHO05D003918 2.4e-10 68.2 40 77.5
DCAR_019964 Daucus carota HOM05D003451 ORTHO05D003918 4.1e-10 67.4 39 79.5
Dinv36234 Davidia involucrata HOM05D003451 ORTHO05D003918 4.1e-10 67.4 39 76.9
TAR369G0018 Trochodendron aralioides HOM05D003451 ORTHO05D003918 4.1e-10 67.4 40 77.5
unitig_27.g25002 Utricularia gibba HOM05D003451 ORTHO05D003918 4.1e-10 67.4 40 72.5
Cc01_g05030 Coffea canephora HOM05D003451 ORTHO05D003918 5.3e-10 67.0 38 76.3
HanXRQChr11g0351591 Helianthus annuus HOM05D003451 ORTHO05D003918 9.1e-10 66.2 40 72.5
Lsat_1_v5_gn_1_49181 Lactuca sativa HOM05D003451 ORTHO05D003918 1.2e-09 65.9 40 72.5
Lsat_1_v5_gn_6_25861 Lactuca sativa HOM05D003451 ORTHO05D003918 1.2e-09 65.9 40 70.0
Lj2A624G28 Lonicera japonica HOM05D003451 ORTHO05D003918 1.2e-09 65.9 40 72.5
Lj5C793G3 Lonicera japonica HOM05D003451 ORTHO05D003918 1.2e-09 65.9 40 72.5
Nn2g15160 Nelumbo nucifera HOM05D003451 ORTHO05D003918 1.2e-09 65.9 40 70.0
Lj7A514T32 Lonicera japonica HOM05D003451 ORTHO05D003918 1.5e-09 65.5 40 72.5
ECA233G6223 Erigeron canadensis HOM05D003451 ORTHO05D003918 2.6e-09 64.7 40 70.0
Sopen11g008970 Solanum pennellii HOM05D000006 ORTHO05D000001 2.6e-09 64.7 40 67.5
TAR623G1024 Trochodendron aralioides HOM05D003451 ORTHO05D003918 2.6e-09 64.7 40 72.5
HPP92_003156 Vanilla planifolia HOM05D003451 ORTHO05D003918 2.6e-09 64.7 40 72.5
HanXRQChr01g0029351 Helianthus annuus HOM05D003451 ORTHO05D003918 4.5e-09 63.9 36 75.0
PSO384G4628 Papaver somniferum HOM05D003451 ORTHO05D003918 7.7e-09 63.2 39 71.8
Sed0009927 Sechium edule HOM05D003451 ORTHO05D003918 7.7e-09 63.2 39 69.2
CDE09G0232 Ceratophyllum demersum HOM05D003451 ORTHO05D003918 1.3e-08 62.4 40 67.5
PSO541G4141 Papaver somniferum HOM05D003451 ORTHO05D003918 1.3e-08 62.4 39 71.8
PSO675G7264 Papaver somniferum HOM05D003451 ORTHO05D003918 1.3e-08 62.4 39 71.8
PSO339G2767 Papaver somniferum HOM05D003451 ORTHO05D003918 2.2e-08 61.6 39 69.2
THA.LOC104817916 Tarenaya hassleriana HOM05D003451 ORTHO05D003918 2.2e-08 61.6 42 66.7
Os05g0140500 Oryza sativa ssp. japonica HOM05D003451 ORTHO05D003918 2.9e-08 61.2 39 69.2
Sc09g0000810 Simmondsia chinensis HOM05D003451 ORTHO05D003918 3.8e-08 60.8 42 64.3
ClCG03G013000 Citrullus lanatus HOM05D003451 ORTHO05D003918 5.0e-08 60.5 39 66.7
MELO3C015160.2 Cucumis melo HOM05D003451 ORTHO05D003918 5.0e-08 60.5 39 66.7
CsaV3_1G043070 Cucumis sativus L. HOM05D003451 ORTHO05D003918 5.0e-08 60.5 39 66.7
Gohir.A09G110960 Gossypium hirsutum HOM05D003451 ORTHO05D003918 5.0e-08 60.5 42 69.0
PGR102G1026 Punica granatum HOM05D003451 ORTHO05D003918 5.0e-08 60.5 42 69.0
Gohir.D09G107600 Gossypium hirsutum HOM05D003451 ORTHO05D003918 6.5e-08 60.1 42 69.0
Hund07469 Selenicereus undatus HOM05D003451 ORTHO05D003918 6.5e-08 60.1 44 59.1
Manes.14G004400 Manihot esculenta HOM05D003451 ORTHO05D003918 8.5e-08 59.7 38 68.4
THA.LOC104816872 Tarenaya hassleriana HOM05D003451 ORTHO05D003918 8.5e-08 59.7 41 65.9
Duzib168G0102 Durio zibethinus HOM05D003451 ORTHO05D003918 1.1e-07 59.3 42 66.7
Gohir.A05G073100 Gossypium hirsutum HOM05D003451 ORTHO05D003918 1.1e-07 59.3 42 66.7
Rhsim13G0217600 Rhododendron simsii HOM05D006939 ORTHO05D008616 1.1e-07 59.3 29 93.1
Atru.chr3.2648 Acer truncatum HOM05D003451 ORTHO05D003918 1.4e-07 58.9 43 65.1
Aqoxy2G00229 Aquilegia oxysepala HOM05D003451 ORTHO05D003918 1.4e-07 58.9 39 61.5
Eucgr.J00743 Eucalyptus grandis HOM05D003451 ORTHO05D003918 1.4e-07 58.9 41 68.3
Gohir.D05G076000 Gossypium hirsutum HOM05D003451 ORTHO05D003918 1.4e-07 58.9 42 66.7
Gorai.009G077300 Gossypium raimondii HOM05D003451 ORTHO05D003918 1.4e-07 58.9 42 66.7
SEGI_06162 Sequoiadendron giganteum HOM05D003451 ORTHO05D003918 1.4e-07 58.9 39 66.7
Ciclev10016808m.g Citrus clementina HOM05D003451 ORTHO05D003918 2.5e-07 58.2 43 65.1
COL.COLO4_37539 Corchorus olitorius HOM05D003451 ORTHO05D003918 2.5e-07 58.2 42 66.7
Duzib170G0373 Durio zibethinus HOM05D003451 ORTHO05D003918 2.5e-07 58.2 42 64.3
Gorai.006G125200 Gossypium raimondii HOM05D003451 ORTHO05D003918 2.5e-07 58.2 41 68.3
TWI32G0677 Tripterygium wilfordii HOM05D003451 ORTHO05D003918 2.5e-07 58.2 43 65.1
TWI60G0042 Tripterygium wilfordii HOM05D003451 ORTHO05D003918 2.5e-07 58.2 43 65.1
Dinv39631 Davidia involucrata HOM05D003451 ORTHO05D003918 5.5e-07 57.0 40 62.5
Thecc.09G245200 Theobroma cacao HOM05D003451 ORTHO05D003918 5.5e-07 57.0 42 66.7
AUR62039863 Chenopodium quinoa HOM05D003451 ORTHO05D003918 9.4e-07 56.2 39 61.5
Gohir.A13G218200 Gossypium hirsutum HOM05D003451 ORTHO05D003918 9.4e-07 56.2 42 64.3
Gorai.013G253000 Gossypium raimondii HOM05D003451 ORTHO05D003918 9.4e-07 56.2 42 64.3
Manes.06G162200 Manihot esculenta HOM05D003451 ORTHO05D003918 9.4e-07 56.2 38 65.8
Nitab4.5_0003160g0010 Nicotiana tabacum HOM05D003451 ORTHO05D003918 1.6e-06 55.5 31 77.4
Hund07468 Selenicereus undatus HOM05D003451 ORTHO05D003918 1.6e-06 55.5 44 56.8
Gohir.D13G221900 Gossypium hirsutum HOM05D003451 ORTHO05D003918 2.7e-06 54.7 42 61.9
QL01p004066 Quercus lobata HOM05D003451 ORTHO05D003918 2.7e-06 54.7 40 62.5
EL10Ac4g10211 Beta vulgaris HOM05D003451 ORTHO05D003918 3.6e-06 54.3 39 59.0
Cpa.g.sc84.26 Carica papaya HOM05D003451 ORTHO05D003918 3.6e-06 54.3 42 61.9
TWI34G0098 Tripterygium wilfordii HOM05D003451 ORTHO05D003918 3.6e-06 54.3 43 60.5
Ah.06g193890 Amaranthus hybridus HOM05D003451 ORTHO05D003918 4.7e-06 53.9 43 60.5
CARHR041670 Cardamine hirsuta HOM05D003451 ORTHO05D003918 4.7e-06 53.9 37 67.6
Zm00001eb062000 Zea mays HOM05D003451 ORTHO05D003918 4.7e-06 53.9 34 64.7
Pp3c11_21740 Physcomitrium patens HOM05D003451 ORTHO05D003918 7.9e-06 53.1 38 60.5


User provided reference genes

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