Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0028196 Camellia sinensis var. sinensis HOM05D006900 ORTHO05D008651 4.4e-155 551.2 271 100.0
CSS0035140 Camellia sinensis var. sinensis HOM05D006900 ORTHO05D008651 7.3e-134 480.7 282 86.5
EL10Ac3g05503 Beta vulgaris HOM05D006900 ORTHO05D008651 7.0e-68 261.5 279 53.4
Rhsim02G0004000 Rhododendron simsii HOM05D006900 ORTHO05D008651 6.1e-48 195.3 291 44.7
Nitab4.5_0010299g0060 Nicotiana tabacum HOM05D006900 ORTHO05D008651 2.7e-43 179.9 254 42.9
Os03g0308800 Oryza sativa ssp. japonica HOM05D006900 ORTHO05D008651 1.6e-35 154.1 127 60.6
CSS0034541 Camellia sinensis var. sinensis HOM05D006900 ORTHO05D008651 1.6e-32 144.1 80 90.0
CDE12G0762 Ceratophyllum demersum HOM05D006900 ORTHO05D008651 2.3e-31 140.2 87 77.0
Glyma.17G033400 Glycine max HOM05D006900 ORTHO05D008651 3.7e-29 132.9 80 78.8
Manes.03G204600 Manihot esculenta HOM05D006900 ORTHO05D008651 3.7e-29 132.9 80 81.2
TWI09G0824 Tripterygium wilfordii HOM05D006900 ORTHO05D008651 4.9e-29 132.5 80 81.2
GSVIVG01034997001 Vitis vinifera HOM05D006900 ORTHO05D008651 6.4e-29 132.1 80 80.0
Carub.0003s1679 Capsella rubella HOM05D006900 ORTHO05D008651 8.3e-29 131.7 80 81.2
Haze_01304 Corylus avellana HOM05D006900 ORTHO05D008651 8.3e-29 131.7 83 78.3
Glyma.07G240000 Glycine max HOM05D006900 ORTHO05D008651 1.1e-28 131.3 80 77.5
Nn3g21725 Nelumbo nucifera HOM05D006900 ORTHO05D008651 1.1e-28 131.3 80 82.5
Cfa015319 Carpinus fangiana HOM05D006900 ORTHO05D008651 1.4e-28 131.0 83 75.9
Actinidia13360 Actinidia chinensis HOM05D006900 ORTHO05D008651 1.9e-28 130.6 80 80.0
Thhalv10020271m.g Eutrema salsugineum HOM05D006900 ORTHO05D008651 1.9e-28 130.6 80 80.0
VMungo1215G0487 Vigna mungo HOM05D006900 ORTHO05D008651 1.9e-28 130.6 80 78.8
SalBow8G4068 Salvia bowleyana HOM05D006900 ORTHO05D008651 3.2e-28 129.8 80 78.8
Nitab4.5_0004979g0030 Nicotiana tabacum HOM05D006900 ORTHO05D008651 4.1e-28 129.4 80 78.8
TPR.G16830 Trifolium pratense HOM05D006900 ORTHO05D008651 4.1e-28 129.4 80 77.5
ATR0693G010 Amborella trichopoda HOM05D006900 ORTHO05D008651 5.4e-28 129.0 80 76.2
Dinv15174 Davidia involucrata HOM05D006900 ORTHO05D008651 5.4e-28 129.0 80 78.8
BcaB06g25797 Brassica carinata HOM05D006900 ORTHO05D008651 7.1e-28 128.6 80 77.5
BcaC05g28835 Brassica carinata HOM05D006900 ORTHO05D008651 7.1e-28 128.6 80 77.5
BolC5t33686H Brassica oleracea HOM05D006900 ORTHO05D008651 7.1e-28 128.6 80 77.5
BraA05t22092Z Brassica rapa HOM05D006900 ORTHO05D008651 7.1e-28 128.6 80 77.5
MD13G1154800 Malus domestica HOM05D006900 ORTHO05D008651 7.1e-28 128.6 80 80.0
Phvul.003G114100 Phaseolus vulgaris HOM05D006900 ORTHO05D008651 7.1e-28 128.6 80 76.2
Prupe.1G117800 Prunus persica HOM05D006900 ORTHO05D008651 7.1e-28 128.6 80 81.2
AL3G30020 Arabidopsis lyrata HOM05D006900 ORTHO05D008651 9.2e-28 128.3 80 78.8
AT3G17040 Arabidopsis thaliana HOM05D006900 ORTHO05D008651 9.2e-28 128.3 80 77.5
A05p32690 Brassica napus HOM05D006900 ORTHO05D008651 9.2e-28 128.3 80 77.5
C05p49400 Brassica napus HOM05D006900 ORTHO05D008651 9.2e-28 128.3 80 77.5
Cc03_g00870 Coffea canephora HOM05D006900 ORTHO05D008651 1.2e-27 127.9 80 80.0
Duzib212G0988 Durio zibethinus HOM05D006900 ORTHO05D008651 1.2e-27 127.9 80 80.0
PGR004G2297 Punica granatum HOM05D006900 ORTHO05D008651 1.2e-27 127.9 80 78.8
Sp3g15260 Schrenkiella parvula HOM05D006900 ORTHO05D008651 1.2e-27 127.9 80 77.5
RcHm_v2.0_Chr4g0425111 Rosa chinensis HOM05D006900 ORTHO05D008651 1.6e-27 127.5 80 80.0
CAN.G274.12 Capsicum annuum HOM05D006900 ORTHO05D008651 2.1e-27 127.1 80 78.8
CDE01G0483 Ceratophyllum demersum HOM05D006900 ORTHO05D008651 2.1e-27 127.1 80 80.0
Migut.G00056 Erythranthe guttata HOM05D006900 ORTHO05D008651 2.1e-27 127.1 80 77.5
Eucgr.H04042 Eucalyptus grandis HOM05D006900 ORTHO05D008651 2.1e-27 127.1 80 77.5
Peaxi162Scf00681g00223 Petunia axillaris HOM05D006900 ORTHO05D008651 2.1e-27 127.1 80 76.2
Sabra10G0112000 Salix brachista HOM05D006900 ORTHO05D008651 2.1e-27 127.1 80 77.5
arahy.Tifrunner.gnm1.ann1.Z0RY6M Arachis hypogaea HOM05D006900 ORTHO05D008651 2.7e-27 126.7 80 77.5
HanXRQChr13g0393421 Helianthus annuus HOM05D006900 ORTHO05D008651 2.7e-27 126.7 80 77.5
Hma1.2p1_0013F.1_g008570 Hydrangea macrophylla HOM05D006900 ORTHO05D008651 2.7e-27 126.7 80 77.5
Hma1.2p1_0013F.1_g008580 Hydrangea macrophylla HOM05D006900 ORTHO05D008651 2.7e-27 126.7 80 77.5
Thecc.04G300100 Theobroma cacao HOM05D006900 ORTHO05D008651 2.7e-27 126.7 80 78.8
Aa31LG8G4070 Aethionema arabicum HOM05D006900 ORTHO05D008651 3.5e-27 126.3 80 77.5
Lj4g0008712 Lotus japonicus HOM05D006900 ORTHO05D008651 3.5e-27 126.3 80 76.2
QL06p012004 Quercus lobata HOM05D006900 ORTHO05D008651 3.5e-27 126.3 80 78.8
MSTRG.10150 Avicennia marina HOM05D006900 ORTHO05D008651 4.6e-27 125.9 80 76.2
vmacro15184 Vaccinium macrocarpon HOM05D006900 ORTHO05D008651 4.6e-27 125.9 94 66.0
FAN07G1219 Fragaria x ananassa HOM05D006900 ORTHO05D008651 6.0e-27 125.6 112 59.8
Potri.010G145000 Populus trichocarpa HOM05D006900 ORTHO05D008651 6.0e-27 125.6 80 73.8
Solyc04g009020.4 Solanum lycopersicum HOM05D006900 ORTHO05D008651 6.0e-27 125.6 80 77.5
Sopen04g004200 Solanum pennellii HOM05D006900 ORTHO05D008651 6.0e-27 125.6 80 77.5
PGSC0003DMG400011531 Solanum tuberosum HOM05D006900 ORTHO05D008651 6.0e-27 125.6 80 77.5
THA.LOC104820304 Tarenaya hassleriana HOM05D006900 ORTHO05D008651 6.0e-27 125.6 80 75.0
arahy.Tifrunner.gnm1.ann1.88EKIY Arachis hypogaea HOM05D006900 ORTHO05D008651 7.8e-27 125.2 80 76.2
CiPaw.02G075100 Carya illinoinensis HOM05D006900 ORTHO05D008651 7.8e-27 125.2 80 78.8
FvH4_4g19660 Fragaria vesca HOM05D006900 ORTHO05D008651 7.8e-27 125.2 112 59.8
FAN12G3178 Fragaria x ananassa HOM05D006900 ORTHO05D008651 7.8e-27 125.2 112 59.8
Lsat_1_v5_gn_6_18120 Lactuca sativa HOM05D006900 ORTHO05D008651 7.8e-27 125.2 80 73.8
Lalb_Chr07g0182071 Lupinus albus HOM05D006900 ORTHO05D008651 7.8e-27 125.2 80 76.2
Psat0s740g0280 Pisum sativum HOM05D006900 ORTHO05D008651 7.8e-27 125.2 80 73.8
TAR362G0296 Trochodendron aralioides HOM05D006900 ORTHO05D008651 7.8e-27 125.2 80 77.5
CANSAT64G2951 Cannabis sativa HOM05D006900 ORTHO05D008651 1.0e-26 124.8 80 76.2
Ca_21442_v3 Cicer arietinum L. HOM05D006900 ORTHO05D008651 1.0e-26 124.8 80 73.8
CARHR092290 Cardamine hirsuta HOM05D006900 ORTHO05D008651 1.3e-26 124.4 80 76.2
COL.COLO4_34620 Corchorus olitorius HOM05D006900 ORTHO05D008651 1.3e-26 124.4 80 77.5
Atru.chr4.3007 Acer truncatum HOM05D006900 ORTHO05D008651 1.7e-26 124.0 80 76.2
ECA233G1261 Erigeron canadensis HOM05D006900 ORTHO05D008651 1.7e-26 124.0 80 75.0
Gohir.A10G171600 Gossypium hirsutum HOM05D006900 ORTHO05D008651 1.7e-26 124.0 80 76.2
Gorai.011G199800 Gossypium raimondii HOM05D006900 ORTHO05D008651 1.7e-26 124.0 80 76.2
unitig_748.g8700 Utricularia gibba HOM05D006900 ORTHO05D008651 1.7e-26 124.0 80 75.0
Gohir.D10G178700 Gossypium hirsutum HOM05D006900 ORTHO05D008651 2.3e-26 123.6 80 76.2
PSO170G0176 Papaver somniferum HOM05D006900 ORTHO05D008651 2.3e-26 123.6 80 75.0
PSO357G0537 Papaver somniferum HOM05D006900 ORTHO05D008651 2.3e-26 123.6 80 75.0
SGA_v2.0_scaffold104G30080 Striga asiatica HOM05D006900 ORTHO05D008651 2.3e-26 123.6 80 75.0
ClCG05G006560 Citrullus lanatus HOM05D006900 ORTHO05D008651 3.9e-26 122.9 80 72.5
MELO3C006715.2 Cucumis melo HOM05D006900 ORTHO05D008651 3.9e-26 122.9 80 72.5
CsaV3_3G015170 Cucumis sativus L. HOM05D006900 ORTHO05D008651 3.9e-26 122.9 80 72.5
Medtr4g122060 Medicago truncatula HOM05D006900 ORTHO05D008651 3.9e-26 122.9 80 72.5
Hund03124 Selenicereus undatus HOM05D006900 ORTHO05D008651 5.1e-26 122.5 81 74.1
Ah.04g156910 Amaranthus hybridus HOM05D006900 ORTHO05D008651 8.6e-26 121.7 80 73.8
DCAR_030472 Daucus carota HOM05D006900 ORTHO05D008651 8.6e-26 121.7 80 72.5
Sc15g0003210 Simmondsia chinensis HOM05D006900 ORTHO05D008651 8.6e-26 121.7 80 73.8
MBI18_g32026_MAGBIO Magnolia biondii HOM05D006900 ORTHO05D008651 1.5e-25 120.9 80 72.5
Zm00001eb014810 Zea mays HOM05D006900 ORTHO05D008651 1.5e-25 120.9 83 69.9
AUR62016204 Chenopodium quinoa HOM05D006900 ORTHO05D008651 1.9e-25 120.6 80 73.8
AUR62039284 Chenopodium quinoa HOM05D006900 ORTHO05D008651 1.9e-25 120.6 80 73.8
Ciclev10004521m.g Citrus clementina HOM05D006900 ORTHO05D008651 3.3e-25 119.8 80 72.5
Sed0008833 Sechium edule HOM05D006900 ORTHO05D008651 3.3e-25 119.8 80 71.2
Aqoxy5G02843 Aquilegia oxysepala HOM05D006900 ORTHO05D008651 9.5e-25 118.2 80 70.0
Gohir.A10G171900 Gossypium hirsutum HOM05D006900 ORTHO05D008651 1.2e-24 117.9 60 86.7
Lj6A690T75 Lonicera japonica HOM05D006900 ORTHO05D008651 1.2e-24 117.9 80 72.5
Mapoly0078s0010 Marchantia polymorpha HOM05D006900 ORTHO05D008651 3.1e-23 113.2 83 62.7
AUR62014934 Chenopodium quinoa HOM05D008055 ORTHO05D009927 4.0e-23 112.8 127 51.2
SEGI_12330 Sequoiadendron giganteum HOM05D006900 ORTHO05D008651 3.4e-22 109.8 83 57.8
CANSAT78G0722 Cannabis sativa HOM05D006900 ORTHO05D008651 7.6e-22 108.6 80 67.5
Oeu032144.1 Olea europaea HOM05D006900 ORTHO05D008651 1.1e-20 104.8 54 92.6
Pp3c1_20310 Physcomitrium patens HOM05D006900 ORTHO05D008651 1.2e-19 101.3 80 60.0
AagrBONN_evm.TU.Sc2ySwM_368.516 Anthoceros agrestis HOM05D006900 ORTHO05D008651 6.0e-19 99.0 80 61.2
SMO115G0152 Selaginella moellendorffii HOM05D006900 ORTHO05D008651 3.0e-18 96.7 80 61.2
CBR_g12177 Chara braunii HOM05D006900 ORTHO05D008651 9.9e-14 81.6 80 48.8
MCO01G208 Micromonas commoda HOM05D006900 ORTHO05D008651 4.9e-13 79.3 170 30.6
Cre09.g416200 Chlamydomonas reinhardtii HOM05D006900 ORTHO05D008651 6.0e-11 72.4 176 29.5
Cpa.g.sc9.62 Carica papaya HOM05D006900 ORTHO05D008651 1.2e-06 58.2 28 85.7


User provided reference genes

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