Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0025820 Camellia sinensis var. sinensis HOM05D005045 ORTHO05D006386 1.4e-193 679.5 351 100.0
CSS0020032 Camellia sinensis var. sinensis HOM05D005045 ORTHO05D006386 9.7e-187 656.8 340 99.1
CiPaw.01G116800 Carya illinoinensis HOM05D005045 ORTHO05D006386 2.6e-171 605.5 350 88.0
Haze_11653 Corylus avellana HOM05D005045 ORTHO05D006386 3.1e-169 598.6 350 87.4
PGR142G0016 Punica granatum HOM05D005045 ORTHO05D006386 2.2e-167 592.4 347 87.6
Cpa.g.sc157.48 Carica papaya HOM05D005045 ORTHO05D006386 2.5e-166 589.0 350 85.7
CsaV3_3G010730 Cucumis sativus L. HOM05D005045 ORTHO05D006386 7.2e-166 587.4 350 86.6
ClCG05G003110 Citrullus lanatus HOM05D005045 ORTHO05D006386 1.2e-165 586.6 350 86.3
MELO3C006292.2 Cucumis melo HOM05D005045 ORTHO05D006386 6.1e-165 584.3 350 86.0
Dinv38168 Davidia involucrata HOM05D005045 ORTHO05D006386 1.0e-164 583.6 350 86.0
Glyma.18G002400 Glycine max HOM05D005045 ORTHO05D006386 1.8e-164 582.8 350 86.3
Peaxi162Scf00423g00410 Petunia axillaris HOM05D005045 ORTHO05D006386 5.2e-164 581.3 350 84.3
Phvul.001G266800 Phaseolus vulgaris HOM05D005045 ORTHO05D006386 5.7e-163 577.8 350 84.9
Sed0026716 Sechium edule HOM05D005045 ORTHO05D006386 5.7e-163 577.8 350 84.9
Duzib151G0179 Durio zibethinus HOM05D005045 ORTHO05D006386 9.7e-163 577.0 350 85.4
TWI53G1845 Tripterygium wilfordii HOM05D005045 ORTHO05D006386 9.7e-163 577.0 350 84.9
CAN.G765.38 Capsicum annuum HOM05D005045 ORTHO05D006386 1.1e-161 573.5 350 84.6
Thecc.04G195000 Theobroma cacao HOM05D005045 ORTHO05D006386 1.1e-161 573.5 350 84.3
Cfa014961 Carpinus fangiana HOM05D005045 ORTHO05D006386 1.8e-161 572.8 336 87.2
Solyc05g053800.3 Solanum lycopersicum HOM05D005045 ORTHO05D006386 1.8e-161 572.8 350 83.7
Lalb_Chr11g0075871 Lupinus albus HOM05D005045 ORTHO05D006386 2.4e-161 572.4 350 83.7
Sopen05g032270 Solanum pennellii HOM05D005045 ORTHO05D006386 2.4e-161 572.4 350 83.7
Gohir.A02G019100 Gossypium hirsutum HOM05D005045 ORTHO05D006386 4.1e-161 571.6 351 84.0
Ciclev10004166m.g Citrus clementina HOM05D005045 ORTHO05D006386 5.3e-161 571.2 351 83.2
Lj6g0005100 Lotus japonicus HOM05D005045 ORTHO05D006386 9.1e-161 570.5 350 84.9
Gorai.005G027800 Gossypium raimondii HOM05D005045 ORTHO05D006386 1.6e-160 569.7 351 83.8
Gohir.D02G022400 Gossypium hirsutum HOM05D005045 ORTHO05D006386 3.5e-160 568.5 351 83.5
Aqoxy2G03932 Aquilegia oxysepala HOM05D005045 ORTHO05D006386 1.0e-159 567.0 350 83.1
Cc03_g08470 Coffea canephora HOM05D005045 ORTHO05D006386 3.8e-159 565.1 350 82.3
Potri.001G320300 Populus trichocarpa HOM05D005045 ORTHO05D006386 6.5e-159 564.3 350 82.6
CARHR125720 Cardamine hirsuta HOM05D005045 ORTHO05D006386 8.5e-159 563.9 349 82.5
TPR.G25379 Trifolium pratense HOM05D005045 ORTHO05D006386 1.5e-158 563.1 350 82.9
Rhsim02G0061900 Rhododendron simsii HOM05D005045 ORTHO05D006386 1.9e-158 562.8 351 81.8
Thhalv10016151m.g Eutrema salsugineum HOM05D005045 ORTHO05D006386 2.5e-158 562.4 350 82.3
Medtr3g084300 Medicago truncatula HOM05D005045 ORTHO05D006386 1.2e-157 560.1 350 82.9
Sp4g14350 Schrenkiella parvula HOM05D005045 ORTHO05D006386 2.7e-157 558.9 350 81.7
Migut.G00767 Erythranthe guttata HOM05D005045 ORTHO05D006386 3.6e-157 558.5 350 81.7
Actinidia28996 Actinidia chinensis HOM05D005045 ORTHO05D006386 1.8e-156 556.2 354 84.2
AL4G27320 Arabidopsis lyrata HOM05D005045 ORTHO05D006386 2.3e-156 555.8 350 80.6
PSO017G0058 Papaver somniferum HOM05D005045 ORTHO05D006386 2.3e-156 555.8 350 82.6
Oeu034322.3 Olea europaea HOM05D005045 ORTHO05D006386 4.0e-156 555.1 350 81.4
Psat5g100040 Pisum sativum HOM05D005045 ORTHO05D006386 1.5e-155 553.1 350 80.9
Carub.0004s1329 Capsella rubella HOM05D005045 ORTHO05D006386 2.0e-155 552.7 350 80.6
HPP92_024209 Vanilla planifolia HOM05D005045 ORTHO05D006386 2.6e-155 552.4 351 80.3
THA.LOC104826172 Tarenaya hassleriana HOM05D005045 ORTHO05D006386 3.3e-155 552.0 350 80.6
AT2G31970 Arabidopsis thaliana HOM05D005045 ORTHO05D006386 5.7e-155 551.2 350 80.0
VMungo1383G3533 Vigna mungo HOM05D005045 ORTHO05D006386 5.7e-155 551.2 336 84.5
Manes.03G144200 Manihot esculenta HOM05D005045 ORTHO05D006386 1.7e-154 549.7 350 81.7
FvH4_4g13300 Fragaria vesca HOM05D005045 ORTHO05D006386 2.2e-154 549.3 350 82.0
BcaC01g05925 Brassica carinata HOM05D005045 ORTHO05D006386 4.8e-154 548.1 350 80.0
RcHm_v2.0_Chr4g0413591 Rosa chinensis HOM05D005045 ORTHO05D006386 1.4e-153 546.6 350 81.4
BcaB01g04004 Brassica carinata HOM05D005045 ORTHO05D006386 2.4e-153 545.8 350 80.0
FAN22G0494 Fragaria x ananassa HOM05D005045 ORTHO05D006386 4.1e-153 545.0 350 81.7
Sc19g0007360 Simmondsia chinensis HOM05D005045 ORTHO05D006386 4.1e-153 545.0 350 80.9
MSTRG.9796 Avicennia marina HOM05D005045 ORTHO05D006386 5.3e-153 544.7 350 79.1
A03p17990 Brassica napus HOM05D005045 ORTHO05D006386 4.5e-152 541.6 356 78.7
Nn3g20083 Nelumbo nucifera HOM05D005045 ORTHO05D006386 4.5e-152 541.6 350 79.7
C03p21030 Brassica napus HOM05D005045 ORTHO05D006386 1.0e-151 540.4 359 78.0
BolC3t14484H Brassica oleracea HOM05D005045 ORTHO05D006386 1.0e-151 540.4 359 78.0
Ca_16407_v3 Cicer arietinum L. HOM05D005045 ORTHO05D006386 2.2e-151 539.3 336 83.0
Ca_16416_v3 Cicer arietinum L. HOM05D005045 ORTHO05D006386 2.2e-151 539.3 336 83.0
BraA03t11060Z Brassica rapa HOM05D005045 ORTHO05D006386 2.5e-150 535.8 371 75.5
MBI07_g27365_MAGBIO Magnolia biondii HOM05D005045 ORTHO05D006386 4.2e-150 535.0 351 78.6
MD05G1230300 Malus domestica HOM05D005045 ORTHO05D006386 5.5e-150 534.6 347 79.3
Aa31LG5G5040 Aethionema arabicum HOM05D005045 ORTHO05D006386 1.2e-149 533.5 336 81.2
ATR0561G148 Amborella trichopoda HOM05D005045 ORTHO05D006386 1.0e-148 530.4 336 80.7
Eucgr.H00025 Eucalyptus grandis HOM05D005045 ORTHO05D006386 1.8e-148 529.6 350 79.7
Os02g0497500 Oryza sativa ssp. japonica HOM05D005045 ORTHO05D006386 4.8e-146 521.5 344 77.6
EL10Ac3g07454 Beta vulgaris HOM05D005045 ORTHO05D006386 4.1e-145 518.5 350 76.9
SalBow8G0828 Salvia bowleyana HOM05D005045 ORTHO05D006386 2.3e-143 512.7 336 78.3
Prupe.1G165000 Prunus persica HOM05D005045 ORTHO05D006386 8.6e-143 510.8 350 77.7
AUR62018556 Chenopodium quinoa HOM05D005045 ORTHO05D006386 1.9e-142 509.6 350 74.0
BcaNung07126 Brassica carinata HOM05D005045 ORTHO05D006386 9.5e-142 507.3 320 80.6
unitig_0.g1961 Utricularia gibba HOM05D005045 ORTHO05D006386 1.6e-141 506.5 350 75.1
Sabra16G0202900 Salix brachista HOM05D005045 ORTHO05D006386 6.1e-141 504.6 405 67.2
DCAR_005488 Daucus carota HOM05D005045 ORTHO05D006386 1.1e-137 493.8 336 75.3
FAN17G1875 Fragaria x ananassa HOM05D005045 ORTHO05D006386 9.2e-137 490.7 296 85.5
Lsat_1_v5_gn_6_59140 Lactuca sativa HOM05D005045 ORTHO05D006386 1.2e-136 490.3 342 74.9
ECA233G4939 Erigeron canadensis HOM05D005045 ORTHO05D006386 7.8e-136 487.6 345 73.3
HanXRQChr02g0058481 Helianthus annuus HOM05D005045 ORTHO05D006386 1.5e-134 483.4 345 72.5
SGA_v2.0_scaffold27G11679 Striga asiatica HOM05D005045 ORTHO05D006386 8.9e-132 474.2 350 72.3
AUR62020863 Chenopodium quinoa HOM05D005045 ORTHO05D006386 3.4e-131 472.2 336 71.4
FAN12G2321 Fragaria x ananassa HOM05D005045 ORTHO05D006386 3.4e-131 472.2 312 79.8
Ah.04g149410 Amaranthus hybridus HOM05D005045 ORTHO05D006386 1.7e-130 469.9 350 70.6
CDE02G0777 Ceratophyllum demersum HOM05D005045 ORTHO05D006386 8.3e-130 467.6 350 72.3
Nitab4.5_0002260g0080 Nicotiana tabacum HOM05D005045 ORTHO05D006386 8.3e-130 467.6 294 81.6
vmacro15566 Vaccinium macrocarpon HOM05D005045 ORTHO05D006386 8.3e-130 467.6 351 71.8
Atru.chr4.1578 Acer truncatum HOM05D005045 ORTHO05D006386 1.6e-128 463.4 266 88.7
Mapoly0027s0186 Marchantia polymorpha HOM05D005045 ORTHO05D006386 4.6e-128 461.8 350 69.1
Pp3c10_3760 Physcomitrium patens HOM05D005045 ORTHO05D006386 3.2e-121 439.1 350 64.9
AagrBONN_evm.TU.Sc2ySwM_368.995 Anthoceros agrestis HOM05D002013 ORTHO05D002293 1.6e-120 436.8 339 65.8
FAN07G1455 Fragaria x ananassa HOM05D005045 ORTHO05D006386 3.9e-119 432.2 287 79.4
COL.COLO4_20233 Corchorus olitorius HOM05D005045 ORTHO05D006386 1.4e-116 423.7 244 88.5
QL06p025788 Quercus lobata HOM05D005045 ORTHO05D006386 8.9e-116 421.0 264 82.2
SMO217G0009 Selaginella moellendorffii HOM05D005045 ORTHO05D006386 1.1e-113 414.1 353 64.0
Lju912A1G33 Lonicera japonica HOM05D005045 ORTHO05D006386 3.2e-113 412.5 335 66.0
SMO356G0717 Selaginella moellendorffii HOM05D005045 ORTHO05D006386 4.4e-107 392.1 348 60.3
AL80U10080 Arabidopsis lyrata HOM05D005045 ORTHO05D006386 1.1e-92 344.4 187 92.0
MCO01G132 Micromonas commoda HOM05D005045 ORTHO05D006386 1.8e-87 327.0 350 50.9
CBR_g44539 Chara braunii HOM05D005045 ORTHO05D006386 2.7e-80 303.1 295 58.6
Cre03.g192550 Chlamydomonas reinhardtii HOM05D005045 ORTHO05D006386 9.0e-76 288.1 348 46.0
PRCOL_00000463 Prasinoderma coloniale HOM05D005045 ORTHO05D006386 1.6e-64 250.8 327 45.9
Nitab4.5_0003358g0080 Nicotiana tabacum HOM05D005045 ORTHO05D006386 1.0e-63 248.1 178 71.3
Cfa022909 Carpinus fangiana HOM05D005045 ORTHO05D006386 2.2e-58 230.3 350 39.4
Nitab4.5_0003358g0090 Nicotiana tabacum HOM05D005045 ORTHO05D006386 2.8e-53 213.4 140 81.4
Actinidia11455 Actinidia chinensis HOM05D005045 ORTHO05D006386 5.9e-51 205.7 139 81.3
Lj6A381G12 Lonicera japonica HOM05D005045 ORTHO05D006386 5.5e-49 199.1 167 61.7
SHI26076 Sapria himalayana HOM05D005045 ORTHO05D006386 9.8e-38 161.8 87 93.1
Actinidia11457 Actinidia chinensis HOM05D005045 ORTHO05D006386 2.0e-35 154.1 106 78.3
SHI26072 Sapria himalayana HOM05D005045 ORTHO05D006386 8.3e-29 132.1 120 61.7
Lsat_1_v5_gn_2_13081 Lactuca sativa HOM05D005045 ORTHO05D006386 9.8e-22 108.6 64 84.4
Lsat_1_v5_gn_5_127521 Lactuca sativa HOM05D005045 ORTHO05D006386 5.4e-20 102.8 106 58.5
Lsat_1_v5_gn_3_72140 Lactuca sativa HOM05D005045 ORTHO05D006386 9.2e-20 102.1 64 78.1
Zm00001eb181120 Zea mays HOM05D005045 ORTHO05D006386 1.7e-18 97.8 90 54.4
Lsat_1_v5_gn_6_56800 Lactuca sativa HOM05D000112 ORTHO05D001918 3.7e-13 80.1 53 71.7
ECA233G3942 Erigeron canadensis HOM05D005045 ORTHO05D006386 3.5e-11 73.6 124 36.3
Lsat_1_v5_gn_8_35100 Lactuca sativa HOM05D000324 ORTHO05D010724 2.3e-10 70.9 63 65.1
Lsat_1_v5_gn_4_149801 Lactuca sativa HOM05D000324 ORTHO05D010724 4.3e-09 66.6 61 65.6
Lsat_1_v5_gn_9_35481 Lactuca sativa HOM05D000324 ORTHO05D010724 7.3e-09 65.9 56 69.6
Lsat_1_v5_gn_1_5060 Lactuca sativa HOM05D001876 ORTHO05D002002 1.5e-06 58.2 33 84.8


User provided reference genes

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