Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0025694 Camellia sinensis var. sinensis HOM05D005263 ORTHO05D006891 3.8e-111 404.8 204 100.0
CSS0005310 Camellia sinensis var. sinensis HOM05D005263 ORTHO05D006891 6.1e-109 397.5 200 99.5
Actinidia36248 Actinidia chinensis HOM05D005263 ORTHO05D006891 8.9e-100 367.1 204 90.2
Gorai.006G000100 Gossypium raimondii HOM05D005263 ORTHO05D006891 5.8e-99 364.4 204 88.2
Gohir.A09G000037 Gossypium hirsutum HOM05D005263 ORTHO05D006891 7.5e-99 364.0 204 88.2
Gohir.D09G000101 Gossypium hirsutum HOM05D005263 ORTHO05D006891 7.5e-99 364.0 204 88.2
Gohir.A09G000300 Gossypium hirsutum HOM05D005263 ORTHO05D006891 9.8e-99 363.6 204 87.7
Hma1.2p1_0265F.1_g106760 Hydrangea macrophylla HOM05D005263 ORTHO05D006891 2.9e-98 362.1 203 88.2
CiPaw.03G000400 Carya illinoinensis HOM05D005263 ORTHO05D006891 3.7e-98 361.7 204 87.7
DCAR_000962 Daucus carota HOM05D005263 ORTHO05D006891 1.4e-97 359.8 204 85.8
Manes.11G073900 Manihot esculenta HOM05D005263 ORTHO05D006891 2.4e-97 359.0 204 88.2
Aqoxy5G03006 Aquilegia oxysepala HOM05D005263 ORTHO05D006891 3.2e-97 358.6 204 87.7
Thecc.04G050600 Theobroma cacao HOM05D005263 ORTHO05D006891 3.2e-97 358.6 204 86.3
Cpa.g.sc70.43 Carica papaya HOM05D005263 ORTHO05D006891 4.1e-97 358.2 204 85.8
Potri.014G145000 Populus trichocarpa HOM05D005263 ORTHO05D006891 5.4e-97 357.8 204 85.8
TAR622G0136 Trochodendron aralioides HOM05D005263 ORTHO05D006891 5.4e-97 357.8 200 88.5
Duzib147G0290 Durio zibethinus HOM05D005263 ORTHO05D006891 6.0e-96 354.4 204 86.8
Sabra14G0109200 Salix brachista HOM05D005263 ORTHO05D006891 6.0e-96 354.4 204 85.3
GSVIVG01032955001 Vitis vinifera HOM05D005263 ORTHO05D006891 7.8e-96 354.0 204 84.8
Nitab4.5_0000519g0290 Nicotiana tabacum HOM05D005263 ORTHO05D006891 1.3e-95 353.2 204 85.8
CAN.G473.163 Capsicum annuum HOM05D005263 ORTHO05D006891 3.0e-95 352.1 204 84.8
Nitab4.5_0002901g0080 Nicotiana tabacum HOM05D005263 ORTHO05D006891 3.0e-95 352.1 204 85.3
Sabra02G0180900 Salix brachista HOM05D005263 ORTHO05D006891 3.0e-95 352.1 204 84.3
Solyc02g094590.3 Solanum lycopersicum HOM05D005263 ORTHO05D006891 3.0e-95 352.1 204 84.8
Sopen02g039240 Solanum pennellii HOM05D005263 ORTHO05D006891 3.0e-95 352.1 204 84.8
Ciclev10017439m.g Citrus clementina HOM05D005263 ORTHO05D006891 8.6e-95 350.5 204 83.8
Migut.F00003 Erythranthe guttata HOM05D005263 ORTHO05D006891 8.6e-95 350.5 204 83.8
SalBow4G2620 Salvia bowleyana HOM05D005263 ORTHO05D006891 1.1e-94 350.1 204 85.3
Prupe.3G314900 Prunus persica HOM05D005263 ORTHO05D006891 1.5e-94 349.7 204 85.3
CANSAT64G2729 Cannabis sativa HOM05D005263 ORTHO05D006891 3.3e-94 348.6 204 83.8
FvH4_6g54430 Fragaria vesca HOM05D005263 ORTHO05D006891 4.3e-94 348.2 204 83.8
Potri.002G237400 Populus trichocarpa HOM05D005263 ORTHO05D006891 5.6e-94 347.8 204 83.8
TWI60G0166 Tripterygium wilfordii HOM05D005263 ORTHO05D006891 5.6e-94 347.8 204 83.3
MD17G1004500 Malus domestica HOM05D005263 ORTHO05D006891 7.3e-94 347.4 204 83.8
FAN05G5194 Fragaria x ananassa HOM05D005263 ORTHO05D006891 1.2e-93 346.7 204 83.3
FAN09G1249 Fragaria x ananassa HOM05D005263 ORTHO05D006891 1.6e-93 346.3 204 83.8
Glyma.19G106000 Glycine max HOM05D005263 ORTHO05D006891 2.1e-93 345.9 204 82.4
Glyma.16G046000 Glycine max HOM05D005263 ORTHO05D006891 2.8e-93 345.5 204 82.4
MSTRG.3034 Avicennia marina HOM05D005263 ORTHO05D006891 3.6e-93 345.1 204 82.8
Dinv33264 Davidia involucrata HOM05D005263 ORTHO05D006891 3.6e-93 345.1 188 91.5
FAN02G2182 Fragaria x ananassa HOM05D005263 ORTHO05D006891 3.6e-93 345.1 202 83.7
Lalb_Chr14g0363581 Lupinus albus HOM05D005263 ORTHO05D006891 6.2e-93 344.4 204 81.9
RcHm_v2.0_Chr2g0176681 Rosa chinensis HOM05D005263 ORTHO05D006891 8.1e-93 344.0 204 82.8
PSO478G0722 Papaver somniferum HOM05D005263 ORTHO05D006891 2.3e-92 342.4 204 83.3
AL3G10030 Arabidopsis lyrata HOM05D005263 ORTHO05D006891 3.1e-92 342.0 204 82.4
BcaNung05596 Brassica carinata HOM05D005263 ORTHO05D006891 3.1e-92 342.0 204 82.4
BcaNung05595 Brassica carinata HOM05D005263 ORTHO05D006891 4.0e-92 341.7 204 81.9
PGR142G1885 Punica granatum HOM05D005263 ORTHO05D006891 4.0e-92 341.7 204 80.9
Cc07_g01440 Coffea canephora HOM05D005263 ORTHO05D006891 5.2e-92 341.3 204 82.4
Sp3g00030 Schrenkiella parvula HOM05D005263 ORTHO05D006891 6.8e-92 340.9 204 81.4
Carub.0003s0003 Capsella rubella HOM05D005263 ORTHO05D006891 8.9e-92 340.5 204 81.9
AT3G02060 Arabidopsis thaliana HOM05D005263 ORTHO05D006891 1.2e-91 340.1 204 81.9
MELO3C005086.2 Cucumis melo HOM05D005263 ORTHO05D006891 1.2e-91 340.1 204 80.4
PSO017G0637 Papaver somniferum HOM05D005263 ORTHO05D006891 1.2e-91 340.1 204 82.8
Phvul.001G099500 Phaseolus vulgaris HOM05D005263 ORTHO05D006891 2.6e-91 339.0 204 80.9
Lj1g0009319 Lotus japonicus HOM05D005263 ORTHO05D006891 9.8e-91 337.0 204 79.9
Aa31LG5G11240 Aethionema arabicum HOM05D005263 ORTHO05D006891 1.7e-90 336.3 204 78.9
Ca_08228_v3 Cicer arietinum L. HOM05D005263 ORTHO05D006891 2.9e-90 335.5 204 79.4
CARHR074870 Cardamine hirsuta HOM05D005263 ORTHO05D006891 6.4e-90 334.3 204 80.9
CDE02G2322 Ceratophyllum demersum HOM05D005263 ORTHO05D006891 6.4e-90 334.3 204 80.9
Sed0001423 Sechium edule HOM05D005263 ORTHO05D006891 8.3e-90 334.0 202 80.2
Thhalv10020076m.g Eutrema salsugineum HOM05D005263 ORTHO05D006891 1.9e-89 332.8 204 80.4
VMungo1383G1213 Vigna mungo HOM05D005263 ORTHO05D006891 1.9e-89 332.8 201 81.1
arahy.Tifrunner.gnm1.ann1.R16MRH Arachis hypogaea HOM05D005263 ORTHO05D006891 9.2e-89 330.5 204 79.4
Medtr7g084560 Medicago truncatula HOM05D005263 ORTHO05D006891 1.3e-87 326.6 204 77.5
FAN14G4399 Fragaria x ananassa HOM05D005263 ORTHO05D006891 1.2e-85 320.1 261 65.5
Eucgr.I01574 Eucalyptus grandis HOM05D005263 ORTHO05D006891 2.1e-85 319.3 204 79.4
TPR.G26435 Trifolium pratense HOM05D005263 ORTHO05D006891 2.1e-85 319.3 202 75.2
unitig_52.g17691 Utricularia gibba HOM05D005263 ORTHO05D006891 3.6e-85 318.5 204 75.0
ATR0582G042 Amborella trichopoda HOM05D005263 ORTHO05D006891 4.4e-83 311.6 204 74.5
COL.COLO4_13398 Corchorus olitorius HOM05D005263 ORTHO05D006891 6.0e-80 301.2 187 81.8
ECA238G3309 Erigeron canadensis HOM05D005263 ORTHO05D006891 1.7e-79 299.7 204 70.1
Haze_14959 Corylus avellana HOM05D005263 ORTHO05D006891 8.6e-79 297.4 172 85.5
SGA_v2.0_scaffold274G46526 Striga asiatica HOM05D005263 ORTHO05D006891 1.1e-78 297.0 204 72.5
QL02p068698 Quercus lobata HOM05D005263 ORTHO05D006891 1.9e-78 296.2 170 85.9
Atru.chr6.2720 Acer truncatum HOM05D005263 ORTHO05D006891 3.3e-78 295.4 177 83.1
HanXRQChr14g0451541 Helianthus annuus HOM05D005263 ORTHO05D006891 6.2e-77 291.2 204 69.6
Zm00001eb113530 Zea mays HOM05D005263 ORTHO05D006891 6.2e-77 291.2 204 67.2
arahy.Tifrunner.gnm1.ann1.J2Y82Q Arachis hypogaea HOM05D005263 ORTHO05D006891 1.1e-76 290.4 204 72.5
CsaV3_5G021940 Cucumis sativus L. HOM05D005263 ORTHO05D006891 3.1e-76 288.9 174 80.5
QL02p068621 Quercus lobata HOM05D005263 ORTHO05D006891 3.1e-76 288.9 175 82.9
Lj7C619G12 Lonicera japonica HOM05D005263 ORTHO05D006891 2.6e-75 285.8 159 86.8
HPP92_009750 Vanilla planifolia HOM05D005263 ORTHO05D006891 2.2e-74 282.7 204 69.1
Psat3g091960 Pisum sativum HOM05D005263 ORTHO05D006891 1.1e-73 280.4 170 79.4
THA.LOC104821142 Tarenaya hassleriana HOM05D005263 ORTHO05D006891 1.1e-73 280.4 169 80.5
ClCG01G007920 Citrullus lanatus HOM05D005263 ORTHO05D006891 2.4e-73 279.3 170 79.4
HPP92_009765 Vanilla planifolia HOM05D005263 ORTHO05D006891 7.1e-73 277.7 204 68.1
SGA_v2.0_scaffold122G33171 Striga asiatica HOM05D005263 ORTHO05D006891 7.8e-72 274.2 170 77.6
EL10Ac6g13898 Beta vulgaris HOM05D005263 ORTHO05D006891 5.1e-71 271.6 170 79.4
AUR62017472 Chenopodium quinoa HOM05D005263 ORTHO05D006891 5.1e-71 271.6 194 70.6
Hma1.2p1_0265F.1_g106780 Hydrangea macrophylla HOM05D005263 ORTHO05D006891 1.9e-70 269.6 162 82.1
Peaxi162Scf00420g00940 Petunia axillaris HOM05D005263 ORTHO05D006891 6.2e-69 264.6 189 74.6
SGA_v2.0_scaffold423G51442 Striga asiatica HOM05D005263 ORTHO05D006891 1.3e-66 256.9 186 69.9
Oeu048685.1 Olea europaea HOM05D005263 ORTHO05D006891 2.9e-66 255.8 151 84.1
Lsat_1_v5_gn_2_95241 Lactuca sativa HOM05D005263 ORTHO05D006891 3.2e-57 225.7 186 64.0
SGA_v2.0_scaffold87G27186 Striga asiatica HOM05D005263 ORTHO05D006891 1.6e-56 223.4 166 66.3
Mapoly0015s0011 Marchantia polymorpha HOM05D005263 ORTHO05D006891 3.5e-48 195.7 203 50.7
SGA_v2.0_scaffold1G00284 Striga asiatica HOM05D005263 ORTHO05D006891 4.1e-44 182.2 134 66.4
AagrBONN_evm.TU.Sc2ySwM_117.63 Anthoceros agrestis HOM05D005263 ORTHO05D006891 1.6e-40 170.2 203 43.3
PGSC0003DMG400020233 Solanum tuberosum HOM05D005263 ORTHO05D006891 1.5e-38 163.7 99 82.8
SMO364G0436 Selaginella moellendorffii HOM05D005263 ORTHO05D006891 4.8e-37 158.7 204 44.1
CBR_g56393 Chara braunii HOM05D000409 ORTHO05D000184 2.7e-32 142.9 172 40.7
vmacro22253 Vaccinium macrocarpon HOM05D005263 ORTHO05D006891 5.9e-27 125.2 75 84.0
Nn4g22084 Nelumbo nucifera HOM05D005263 ORTHO05D006891 3.0e-23 112.8 204 39.2
Hma1.2p1_0265F.1_g106770 Hydrangea macrophylla HOM05D005263 ORTHO05D006891 2.6e-19 99.8 52 92.3
BolC3t14640H Brassica oleracea HOM05D001005 ORTHO05D000836 5.5e-17 92.0 61 73.8
BcaC01g05768 Brassica carinata HOM05D005263 ORTHO05D006891 9.4e-17 91.3 197 34.0
Lalb_Chr24g0402881 Lupinus albus HOM05D005263 ORTHO05D006891 1.3e-13 80.9 65 66.2
vmacro22254 Vaccinium macrocarpon HOM05D005263 ORTHO05D006891 1.8e-12 77.0 40 90.0
Zm00001eb285440 Zea mays HOM05D000915 ORTHO05D001662 2.0e-11 73.6 68 50.0
QL02p068671 Quercus lobata HOM05D005263 ORTHO05D006891 6.5e-10 68.6 36 86.1


User provided reference genes

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