Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0021900 Camellia sinensis var. sinensis HOM05D005196 ORTHO05D006107 1.1e-128 463.4 237 100.0
MSTRG.11956 Avicennia marina HOM05D005196 ORTHO05D006107 7.9e-92 340.9 239 74.1
Hma1.2p1_0377F.1_g139550 Hydrangea macrophylla HOM05D005196 ORTHO05D006107 6.7e-91 337.8 248 74.6
GSVIVG01019415001 Vitis vinifera HOM05D005196 ORTHO05D006107 3.3e-90 335.5 184 89.1
Lj2A178G47 Lonicera japonica HOM05D005196 ORTHO05D006107 1.3e-89 333.6 247 72.9
Cc08_g15230 Coffea canephora HOM05D005196 ORTHO05D006107 2.2e-89 332.8 230 75.7
Migut.A00721 Erythranthe guttata HOM05D005196 ORTHO05D006107 2.8e-89 332.4 238 73.1
CANSAT21G0568 Cannabis sativa HOM05D005196 ORTHO05D006107 1.4e-88 330.1 245 71.4
Rhsim02G0235500 Rhododendron simsii HOM05D005196 ORTHO05D006107 3.1e-88 328.9 232 76.7
Nn1g01669 Nelumbo nucifera HOM05D005196 ORTHO05D006107 1.2e-87 327.0 236 75.8
Nitab4.5_0007906g0030 Nicotiana tabacum HOM05D005196 ORTHO05D006107 1.2e-87 327.0 243 73.3
Solyc08g081570.3 Solanum lycopersicum HOM05D005196 ORTHO05D006107 1.2e-87 327.0 230 74.3
SGA_v2.0_scaffold111G31472 Striga asiatica HOM05D005196 ORTHO05D006107 1.5e-87 326.6 241 71.8
FAN08G3453 Fragaria x ananassa HOM05D005196 ORTHO05D006107 2.0e-87 326.2 228 74.6
Lsat_1_v5_gn_6_84980 Lactuca sativa HOM05D005196 ORTHO05D006107 2.0e-87 326.2 235 75.3
Sopen08g029880 Solanum pennellii HOM05D005196 ORTHO05D006107 2.0e-87 326.2 230 73.9
PGSC0003DMG400012185 Solanum tuberosum HOM05D005196 ORTHO05D006107 2.6e-87 325.9 231 72.7
RcHm_v2.0_Chr7g0196611 Rosa chinensis HOM05D005196 ORTHO05D006107 3.4e-87 325.5 228 74.1
SalBow8G4511 Salvia bowleyana HOM05D005196 ORTHO05D006107 3.4e-87 325.5 237 73.0
MD14G1111600 Malus domestica HOM05D005196 ORTHO05D006107 4.5e-87 325.1 241 71.8
Peaxi162Scf00074g01724 Petunia axillaris HOM05D005196 ORTHO05D006107 4.5e-87 325.1 182 86.8
PGR031G3114 Punica granatum HOM05D005196 ORTHO05D006107 5.9e-87 324.7 199 82.9
Prupe.5G106300 Prunus persica HOM05D005196 ORTHO05D006107 7.7e-87 324.3 243 71.6
CAN.G532.37 Capsicum annuum HOM05D005196 ORTHO05D006107 1.0e-86 323.9 237 72.2
Duzib205G0943 Durio zibethinus HOM05D005196 ORTHO05D006107 1.0e-86 323.9 230 74.3
Cpa.g.sc631.3 Carica papaya HOM05D005196 ORTHO05D006107 1.3e-86 323.6 242 71.5
FAN13G1103 Fragaria x ananassa HOM05D005196 ORTHO05D006107 1.3e-86 323.6 235 73.2
TAR636G2140 Trochodendron aralioides HOM05D005196 ORTHO05D006107 1.3e-86 323.6 179 89.4
Haze_08760 Corylus avellana HOM05D005196 ORTHO05D006107 3.8e-86 322.0 237 74.3
FAN18G0698 Fragaria x ananassa HOM05D005196 ORTHO05D006107 5.0e-86 321.6 179 86.6
Duzib068G0196 Durio zibethinus HOM05D005196 ORTHO05D006107 6.5e-86 321.2 248 70.6
SGA_v2.0_scaffold144G35903 Striga asiatica HOM05D005196 ORTHO05D006107 6.5e-86 321.2 215 76.3
Gohir.D03G078300 Gossypium hirsutum HOM05D005196 ORTHO05D006107 8.5e-86 320.9 236 73.7
Gorai.003G085800 Gossypium raimondii HOM05D005196 ORTHO05D006107 8.5e-86 320.9 236 73.7
Actinidia10607 Actinidia chinensis HOM05D005196 ORTHO05D006107 1.1e-85 320.5 189 85.7
FvH4_5g03170 Fragaria vesca HOM05D005196 ORTHO05D006107 1.1e-85 320.5 227 73.6
FAN04G1400 Fragaria x ananassa HOM05D005196 ORTHO05D006107 1.1e-85 320.5 227 74.9
HanXRQChr03g0085971 Helianthus annuus HOM05D005196 ORTHO05D006107 1.1e-85 320.5 237 74.3
Aqoxy7G00203 Aquilegia oxysepala HOM05D005196 ORTHO05D006107 1.4e-85 320.1 249 69.9
Eucgr.E00780 Eucalyptus grandis HOM05D005196 ORTHO05D006107 1.4e-85 320.1 215 79.1
BcaB07g31533 Brassica carinata HOM05D005196 ORTHO05D006107 1.9e-85 319.7 247 71.7
unitig_37.g12237 Utricularia gibba HOM05D005196 ORTHO05D006107 1.9e-85 319.7 192 83.3
QL12p031809 Quercus lobata HOM05D005196 ORTHO05D006107 3.2e-85 318.9 197 80.7
ClCG07G007880 Citrullus lanatus HOM05D005196 ORTHO05D006107 4.2e-85 318.5 236 73.7
Sed0013368 Sechium edule HOM05D005196 ORTHO05D006107 4.2e-85 318.5 239 71.5
Nitab4.5_0003015g0100 Nicotiana tabacum HOM05D005196 ORTHO05D006107 7.2e-85 317.8 243 71.6
Potri.001G099300 Populus trichocarpa HOM05D005196 ORTHO05D006107 7.2e-85 317.8 238 69.3
Potri.003G132400 Populus trichocarpa HOM05D005196 ORTHO05D006107 7.2e-85 317.8 237 71.3
Thecc.03G286300 Theobroma cacao HOM05D005196 ORTHO05D006107 7.2e-85 317.8 239 72.0
CiPaw.11G130000 Carya illinoinensis HOM05D005196 ORTHO05D006107 9.4e-85 317.4 241 71.0
COL.COLO4_08364 Corchorus olitorius HOM05D005196 ORTHO05D006107 1.6e-84 316.6 236 70.8
A09p15170 Brassica napus HOM05D005196 ORTHO05D006107 2.1e-84 316.2 187 84.5
Manes.02G017610 Manihot esculenta HOM05D005196 ORTHO05D006107 2.1e-84 316.2 239 72.0
Aa31LG2G1060 Aethionema arabicum HOM05D005196 ORTHO05D006107 2.7e-84 315.8 205 78.5
AL2G11140 Arabidopsis lyrata HOM05D005196 ORTHO05D006107 2.7e-84 315.8 237 70.9
BraA09t37052Z Brassica rapa HOM05D005196 ORTHO05D006107 2.7e-84 315.8 236 71.6
arahy.Tifrunner.gnm1.ann1.RG9U10 Arachis hypogaea HOM05D005196 ORTHO05D006107 3.6e-84 315.5 181 85.1
Glyma.11G021400 Glycine max HOM05D005196 ORTHO05D006107 4.7e-84 315.1 236 69.9
Gohir.A02G105500 Gossypium hirsutum HOM05D005196 ORTHO05D006107 4.7e-84 315.1 234 71.4
Hund11434 Selenicereus undatus HOM05D005196 ORTHO05D006107 4.7e-84 315.1 238 70.6
BraA09t37159Z Brassica rapa HOM05D005196 ORTHO05D006107 6.1e-84 314.7 187 84.0
BcaB07g31421 Brassica carinata HOM05D005196 ORTHO05D006107 7.9e-84 314.3 249 70.7
A09p14050 Brassica napus HOM05D005196 ORTHO05D006107 7.9e-84 314.3 237 71.7
BolC9t54591H Brassica oleracea HOM05D005196 ORTHO05D006107 7.9e-84 314.3 216 76.9
Carub.0002s0087 Capsella rubella HOM05D005196 ORTHO05D006107 7.9e-84 314.3 200 80.0
Cfa012239 Carpinus fangiana HOM05D005196 ORTHO05D006107 7.9e-84 314.3 206 78.6
DCAR_005572 Daucus carota HOM05D005196 ORTHO05D006107 7.9e-84 314.3 204 78.9
TWI81G1086 Tripterygium wilfordii HOM05D005196 ORTHO05D006107 7.9e-84 314.3 187 82.9
AT1G63970 Arabidopsis thaliana HOM05D005196 ORTHO05D006107 1.0e-83 313.9 238 71.0
CsaV3_4G006100 Cucumis sativus L. HOM05D005196 ORTHO05D006107 1.0e-83 313.9 231 74.0
Medtr5g010010 Medicago truncatula HOM05D005196 ORTHO05D006107 1.4e-83 313.5 201 76.6
MELO3C016339.2 Cucumis melo HOM05D005196 ORTHO05D006107 1.8e-83 313.2 235 71.9
PSO782G4831 Papaver somniferum HOM05D005196 ORTHO05D006107 1.8e-83 313.2 246 70.3
LjContig00312_ERROPOS870357g0014232 Lotus japonicus HOM05D005196 ORTHO05D006107 2.3e-83 312.8 198 78.3
Gorai.004G137800 Gossypium raimondii HOM05D005196 ORTHO05D006107 3.0e-83 312.4 179 85.5
Sabra03G0094900 Salix brachista HOM05D005196 ORTHO05D006107 3.0e-83 312.4 210 75.2
MSTRG.13860 Avicennia marina HOM05D005196 ORTHO05D006107 3.9e-83 312.0 237 69.2
BcaC04g22662 Brassica carinata HOM05D005196 ORTHO05D006107 3.9e-83 312.0 239 72.4
C09p16940 Brassica napus HOM05D005196 ORTHO05D006107 3.9e-83 312.0 239 72.0
PSO478G4030 Papaver somniferum HOM05D005196 ORTHO05D006107 3.9e-83 312.0 244 70.5
CARHR047010 Cardamine hirsuta HOM05D005196 ORTHO05D006107 5.1e-83 311.6 222 74.3
AUR62010748 Chenopodium quinoa HOM05D005196 ORTHO05D006107 8.8e-83 310.8 191 80.1
Os02g0680600 Oryza sativa ssp. japonica HOM05D005196 ORTHO05D006107 8.8e-83 310.8 234 73.1
THA.LOC104809368 Tarenaya hassleriana HOM05D005196 ORTHO05D006107 8.8e-83 310.8 234 70.9
ATR0661G112 Amborella trichopoda HOM05D005196 ORTHO05D006107 1.1e-82 310.5 178 84.8
Ca_24538_v3 Cicer arietinum L. HOM05D005196 ORTHO05D006107 1.1e-82 310.5 232 69.8
Sp2g00720 Schrenkiella parvula HOM05D005196 ORTHO05D006107 1.5e-82 310.1 240 67.9
HPP92_025411 Vanilla planifolia HOM05D005196 ORTHO05D006107 1.5e-82 310.1 212 74.5
Oeu042360.2 Olea europaea HOM05D005196 ORTHO05D006107 2.6e-82 309.3 259 66.0
Ciclev10021991m.g Citrus clementina HOM05D005196 ORTHO05D006107 4.4e-82 308.5 234 70.5
C09p18370 Brassica napus HOM05D005196 ORTHO05D006107 5.7e-82 308.1 238 71.0
BolC9t54730H Brassica oleracea HOM05D005196 ORTHO05D006107 5.7e-82 308.1 238 71.0
Phvul.002G159900 Phaseolus vulgaris HOM05D005196 ORTHO05D006107 5.7e-82 308.1 238 68.1
THA.LOC104823600 Tarenaya hassleriana HOM05D005196 ORTHO05D006107 7.4e-82 307.8 202 78.2
BcaC04g22518 Brassica carinata HOM05D005196 ORTHO05D006107 9.7e-82 307.4 237 70.9
MD06G1090700 Malus domestica HOM05D005196 ORTHO05D006107 9.7e-82 307.4 244 70.1
Sabra01G0074500 Salix brachista HOM05D005196 ORTHO05D006107 1.3e-81 307.0 183 80.3
CiPaw.12G089400 Carya illinoinensis HOM05D005196 ORTHO05D006107 1.7e-81 306.6 237 70.9
Gohir.D08G134600 Gossypium hirsutum HOM05D005196 ORTHO05D006107 3.7e-81 305.4 186 82.3
Ah.12g051910 Amaranthus hybridus HOM05D005196 ORTHO05D006107 2.4e-80 302.8 233 67.8
Lalb_Chr09g0320831 Lupinus albus HOM05D005196 ORTHO05D006107 2.4e-80 302.8 175 82.9
SMO118G0129 Selaginella moellendorffii HOM05D005196 ORTHO05D006107 2.0e-79 299.7 213 70.4
SEGI_33828 Sequoiadendron giganteum HOM05D005196 ORTHO05D006107 2.6e-79 299.3 178 80.9
Mapoly0107s0035 Marchantia polymorpha HOM05D005196 ORTHO05D006107 1.3e-78 297.0 180 80.6
ECA240G2051 Erigeron canadensis HOM05D000662 ORTHO05D000597 1.7e-78 296.6 221 72.9
Pp3c3_18960 Physcomitrium patens HOM05D005196 ORTHO05D006107 2.7e-76 289.3 225 68.4
Sc01g0009830 Simmondsia chinensis HOM05D005196 ORTHO05D006107 1.0e-75 287.3 207 68.6
Eucgr.L03318 Eucalyptus grandis HOM05D005196 ORTHO05D006107 1.3e-73 280.4 193 76.7
CBR_g41628 Chara braunii HOM05D005196 ORTHO05D006107 1.7e-73 280.0 176 74.4
arahy.Tifrunner.gnm1.ann1.072U0I Arachis hypogaea HOM05D005196 ORTHO05D006107 6.3e-73 278.1 234 65.4
vmacro11408 Vaccinium macrocarpon HOM05D005196 ORTHO05D006107 8.2e-73 277.7 245 64.9
Dinv37598 Davidia involucrata HOM05D005196 ORTHO05D006107 1.7e-70 270.0 208 70.2
EL10Ac5g12833 Beta vulgaris HOM05D005196 ORTHO05D006107 2.2e-70 269.6 239 60.3
Actinidia28347 Actinidia chinensis HOM05D005196 ORTHO05D006107 2.7e-68 262.7 213 68.1
Cre12.g503550 Chlamydomonas reinhardtii HOM05D005196 ORTHO05D006107 8.0e-68 261.2 204 67.2
PRCOL_00001316 Prasinoderma coloniale HOM05D005196 ORTHO05D006107 8.8e-67 257.7 159 72.3
TPR.G6615 Trifolium pratense HOM05D005196 ORTHO05D006107 1.2e-66 257.3 193 69.4
Ah.07g196720 Amaranthus hybridus HOM05D005196 ORTHO05D006107 4.8e-65 251.9 235 61.3
SEGI_11641 Sequoiadendron giganteum HOM05D005196 ORTHO05D006107 5.3e-64 248.4 229 59.8
MCO02G159 Micromonas commoda HOM05D005196 ORTHO05D006107 2.9e-62 242.7 209 60.8
Atru.chr9.2118 Acer truncatum HOM05D005196 ORTHO05D006107 3.7e-57 225.7 122 90.2
CDE11G0665 Ceratophyllum demersum HOM05D005196 ORTHO05D006107 1.1e-48 197.6 175 62.3
Cfa012243 Carpinus fangiana HOM05D005196 ORTHO05D006107 4.5e-47 192.2 164 63.4
TAR629G0373 Trochodendron aralioides HOM05D005196 ORTHO05D006107 6.1e-44 181.8 153 64.1
Sed0007168 Sechium edule HOM05D005196 ORTHO05D006107 4.0e-43 179.1 112 82.1
Psat2g183400 Pisum sativum HOM05D005196 ORTHO05D006107 1.2e-42 177.6 159 60.4
Zm00001eb187250 Zea mays HOM05D005196 ORTHO05D006107 2.6e-42 176.4 158 62.0
Zm00001eb250670 Zea mays HOM05D005196 ORTHO05D006107 9.8e-42 174.5 97 83.5
C04p29780 Brassica napus HOM05D005196 ORTHO05D006107 4.1e-40 169.1 104 81.7
BcaC02g10359 Brassica carinata HOM05D005196 ORTHO05D006107 5.4e-40 168.7 104 80.8
Cfa012242 Carpinus fangiana HOM05D005196 ORTHO05D006107 2.4e-32 143.3 82 89.0
VMungo0251G1828 Vigna mungo HOM05D005196 ORTHO05D006107 1.6e-31 140.6 78 89.7
Gohir.A08G114400 Gossypium hirsutum HOM05D005196 ORTHO05D006107 2.7e-31 139.8 140 57.1
PSO782G0193 Papaver somniferum HOM05D005196 ORTHO05D006107 2.7e-31 139.8 124 60.5
AUR62019751 Chenopodium quinoa HOM05D005196 ORTHO05D006107 3.3e-29 132.9 75 89.3
Haze_27119 Corylus avellana HOM05D005196 ORTHO05D006107 3.6e-28 129.4 201 37.3
TAR629G1542 Trochodendron aralioides HOM05D005196 ORTHO05D006107 3.6e-28 129.4 71 94.4
CSS0017594 Camellia sinensis var. sinensis HOM05D005196 ORTHO05D006107 3.5e-23 112.8 77 79.2
AagrBONN_evm.TU.Sc2ySwM_344.1771 Anthoceros agrestis HOM05D005196 ORTHO05D006107 1.8e-19 100.5 72 66.7
BolC4t24512H Brassica oleracea HOM05D005196 ORTHO05D006107 2.4e-16 90.1 92 57.6
Gohir.A08G114450 Gossypium hirsutum HOM05D005196 ORTHO05D006107 2.7e-15 86.7 49 83.7
MD13G1222800 Malus domestica HOM05D005196 ORTHO05D006107 5.8e-10 68.9 47 68.1
MD06G1092700 Malus domestica HOM05D005196 ORTHO05D006107 2.2e-09 67.0 109 41.3
Hund14271 Selenicereus undatus HOM05D007428 ORTHO05D009308 1.4e-08 64.3 32 90.6
C04p29790 Brassica napus HOM05D005196 ORTHO05D006107 3.2e-08 63.2 28 92.9
BolC4t24513H Brassica oleracea HOM05D005196 ORTHO05D006107 3.2e-08 63.2 28 92.9
MD14G1120300 Malus domestica HOM05D005196 ORTHO05D006107 1.7e-06 57.4 52 53.8


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