Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0020697 Camellia sinensis var. sinensis HOM05D005614 ORTHO05D006759 1.2e-166 589.7 293 100.0
CSS0036035 Camellia sinensis var. sinensis HOM05D005614 ORTHO05D006759 5.8e-161 570.9 293 98.0
Dinv07241 Davidia involucrata HOM05D005614 ORTHO05D006759 1.0e-141 506.9 295 86.1
Actinidia03480 Actinidia chinensis HOM05D005614 ORTHO05D006759 2.0e-137 492.7 293 85.7
RhsimUnG0093400 Rhododendron simsii HOM05D005614 ORTHO05D006759 1.3e-136 490.0 295 83.7
ECA246G0276 Erigeron canadensis HOM05D005614 ORTHO05D006759 7.7e-129 464.2 293 79.9
HanXRQChr16g0532671 Helianthus annuus HOM05D005614 ORTHO05D006759 1.3e-128 463.4 288 80.6
PGSC0003DMG400026996 Solanum tuberosum HOM05D005614 ORTHO05D006759 2.2e-128 462.6 287 79.8
Solyc06g071450.4 Solanum lycopersicum HOM05D005614 ORTHO05D006759 5.0e-128 461.5 287 79.4
Nitab4.5_0000866g0090 Nicotiana tabacum HOM05D005614 ORTHO05D006759 1.4e-127 459.9 311 76.2
CAN.G628.77 Capsicum annuum HOM05D005614 ORTHO05D006759 5.5e-127 458.0 288 79.5
Sopen06g027730 Solanum pennellii HOM05D005614 ORTHO05D006759 7.2e-127 457.6 287 78.7
Rhsim11G0047100 Rhododendron simsii HOM05D005614 ORTHO05D006759 1.2e-126 456.8 274 83.2
HanXRQChr02g0053121 Helianthus annuus HOM05D005614 ORTHO05D006759 2.1e-126 456.1 288 79.2
GSVIVG01008884001 Vitis vinifera HOM05D005614 ORTHO05D006759 4.7e-126 454.9 302 77.2
Migut.D01926 Erythranthe guttata HOM05D005614 ORTHO05D006759 3.0e-125 452.2 293 78.5
DCAR_017415 Daucus carota HOM05D005614 ORTHO05D006759 1.1e-124 450.3 293 77.1
Cc04_g13870 Coffea canephora HOM05D005614 ORTHO05D006759 3.3e-124 448.7 286 78.7
vmacro14329 Vaccinium macrocarpon HOM05D005614 ORTHO05D006759 4.8e-123 444.9 278 81.7
Sc01g0001200 Simmondsia chinensis HOM05D005614 ORTHO05D006759 6.3e-123 444.5 313 72.2
SalBow3G0912 Salvia bowleyana HOM05D005614 ORTHO05D006759 4.1e-122 441.8 291 77.3
Oeu024691.1 Olea europaea HOM05D005614 ORTHO05D006759 7.7e-121 437.6 275 78.9
Nitab4.5_0001017g0060 Nicotiana tabacum HOM05D005614 ORTHO05D006759 1.3e-120 436.8 289 77.5
Potri.005G176600 Populus trichocarpa HOM05D005614 ORTHO05D006759 3.8e-120 435.3 302 73.5
MD15G1351400 Malus domestica HOM05D005614 ORTHO05D006759 5.0e-120 434.9 303 74.9
TAR628G1424 Trochodendron aralioides HOM05D005614 ORTHO05D006759 6.5e-120 434.5 302 72.8
Prupe.1G500100 Prunus persica HOM05D005614 ORTHO05D006759 2.5e-119 432.6 302 75.2
Thecc.08G123600 Theobroma cacao HOM05D005614 ORTHO05D006759 3.2e-119 432.2 302 74.2
Ciclev10002002m.g Citrus clementina HOM05D005614 ORTHO05D006759 5.5e-119 431.4 303 75.2
Gohir.A05G234600 Gossypium hirsutum HOM05D005614 ORTHO05D006759 9.4e-119 430.6 301 74.4
Cpa.g.sc36.54 Carica papaya HOM05D005614 ORTHO05D006759 2.1e-118 429.5 302 74.2
RcHm_v2.0_Chr6g0295621 Rosa chinensis HOM05D005614 ORTHO05D006759 2.1e-118 429.5 301 73.1
PSO782G2082 Papaver somniferum HOM05D005614 ORTHO05D006759 2.3e-117 426.0 302 72.5
CANSAT54G1242 Cannabis sativa HOM05D005614 ORTHO05D006759 3.9e-117 425.2 296 74.7
PSO170G2981 Papaver somniferum HOM05D005614 ORTHO05D006759 3.9e-117 425.2 302 71.9
Atru.chr13.1437_Atru.chr13.1438 Acer truncatum HOM05D005614 ORTHO05D006759 6.7e-117 424.5 301 72.8
FvH4_2g26720 Fragaria vesca HOM05D005614 ORTHO05D006759 6.7e-117 424.5 299 72.9
Gorai.009G245300 Gossypium raimondii HOM05D005614 ORTHO05D006759 2.6e-116 422.5 301 73.4
PGR042G1492 Punica granatum HOM05D005614 ORTHO05D006759 4.4e-116 421.8 302 73.5
TWI79G0333 Tripterygium wilfordii HOM05D005614 ORTHO05D006759 5.7e-116 421.4 304 73.0
CiPaw.05G223000 Carya illinoinensis HOM05D005614 ORTHO05D006759 1.3e-115 420.2 295 74.2
THA.LOC104806819 Tarenaya hassleriana HOM05D005614 ORTHO05D006759 2.8e-115 419.1 301 72.8
CARHR138110 Cardamine hirsuta HOM05D005614 ORTHO05D006759 4.8e-115 418.3 304 71.1
Thhalv10008316m.g Eutrema salsugineum HOM05D005614 ORTHO05D006759 4.8e-115 418.3 305 71.5
Aqoxy7G02121 Aquilegia oxysepala HOM05D005614 ORTHO05D006759 8.2e-115 417.5 302 71.9
QL09p035347 Quercus lobata HOM05D005614 ORTHO05D006759 1.1e-114 417.2 304 72.7
Sp1g16310 Schrenkiella parvula HOM05D005614 ORTHO05D006759 1.4e-114 416.8 305 71.8
CARHR018930 Cardamine hirsuta HOM05D005614 ORTHO05D006759 5.3e-114 414.8 303 72.9
AT1G18340 Arabidopsis thaliana HOM05D005614 ORTHO05D006759 2.6e-113 412.5 306 70.6
AL1G30720 Arabidopsis lyrata HOM05D005614 ORTHO05D006759 5.9e-113 411.4 306 70.3
BcaB03g12976 Brassica carinata HOM05D005614 ORTHO05D006759 2.2e-112 409.5 307 69.7
Sed0025863 Sechium edule HOM05D005614 ORTHO05D006759 1.1e-111 407.1 302 70.2
BcaB07g31845 Brassica carinata HOM05D005614 ORTHO05D006759 1.9e-111 406.4 305 69.8
C05p16610 Brassica napus HOM05D005614 ORTHO05D006759 5.5e-111 404.8 305 70.2
Carub.0001s1797 Capsella rubella HOM05D005614 ORTHO05D006759 5.5e-111 404.8 302 69.2
A06p14370 Brassica napus HOM05D005614 ORTHO05D006759 9.4e-111 404.1 305 69.8
Aa31LG6G9300 Aethionema arabicum HOM05D005614 ORTHO05D006759 2.1e-110 402.9 302 68.9
BolC5t30360H Brassica oleracea HOM05D005614 ORTHO05D006759 2.1e-110 402.9 305 70.2
BcaC05g25728 Brassica carinata HOM05D005614 ORTHO05D006759 4.7e-110 401.7 307 69.4
BraA06t24565Z Brassica rapa HOM05D005614 ORTHO05D006759 8.0e-110 401.0 305 69.2
BolC8t49486H Brassica oleracea HOM05D005614 ORTHO05D006759 1.0e-109 400.6 309 68.3
CsaV3_2G009350 Cucumis sativus L. HOM05D005614 ORTHO05D006759 2.0e-108 396.4 277 73.3
FAN15G2492 Fragaria x ananassa HOM05D005614 ORTHO05D006759 1.3e-107 393.7 320 66.6
ClCG08G005590 Citrullus lanatus HOM05D005614 ORTHO05D006759 3.7e-107 392.1 336 63.4
Lj1g0021555 Lotus japonicus HOM05D005614 ORTHO05D006759 3.7e-107 392.1 297 68.0
BraA08t34975Z Brassica rapa HOM05D005614 ORTHO05D006759 6.3e-107 391.3 303 67.7
C08p18540 Brassica napus HOM05D005614 ORTHO05D006759 1.1e-106 390.6 299 68.6
A08p30430 Brassica napus HOM05D005614 ORTHO05D006759 1.4e-106 390.2 300 69.0
FAN27G1664 Fragaria x ananassa HOM05D005614 ORTHO05D006759 1.6e-105 386.7 320 65.6
Lalb_Chr23g0270981 Lupinus albus HOM05D005614 ORTHO05D006759 2.7e-105 386.0 298 68.8
Sed0022578 Sechium edule HOM05D005614 ORTHO05D006759 5.9e-105 384.8 314 65.9
Ca_15193_v3 Cicer arietinum L. HOM05D005614 ORTHO05D006759 3.8e-104 382.1 298 64.8
FAN20G0890 Fragaria x ananassa HOM05D005614 ORTHO05D006759 1.5e-103 380.2 270 72.2
arahy.Tifrunner.gnm1.ann1.2VS3GS Arachis hypogaea HOM05D005614 ORTHO05D006759 2.5e-103 379.4 290 68.3
Medtr3g072430 Medicago truncatula HOM05D005614 ORTHO05D006759 9.4e-103 377.5 296 65.9
arahy.Tifrunner.gnm1.ann1.MKV7IN Arachis hypogaea HOM05D005614 ORTHO05D006759 1.2e-102 377.1 301 65.8
HPP92_013333 Vanilla planifolia HOM05D005614 ORTHO05D006759 4.7e-102 375.2 304 63.5
COL.COLO4_35944 Corchorus olitorius HOM05D005614 ORTHO05D006759 6.1e-102 374.8 258 72.9
Lsat_1_v5_gn_3_69700 Lactuca sativa HOM05D005614 ORTHO05D006759 6.1e-102 374.8 235 80.4
Glyma.06G112400 Glycine max HOM05D005614 ORTHO05D006759 3.4e-100 369.0 298 64.4
Phvul.009G124300 Phaseolus vulgaris HOM05D005614 ORTHO05D006759 5.7e-100 368.2 296 64.5
Glyma.04G250400 Glycine max HOM05D005614 ORTHO05D006759 7.5e-100 367.9 298 64.4
Duzib041G0760 Durio zibethinus HOM05D005614 ORTHO05D006759 5.4e-98 361.7 301 65.8
EL10Ac1g01047 Beta vulgaris HOM05D005614 ORTHO05D006759 5.9e-97 358.2 304 64.1
Os02g0125800 Oryza sativa ssp. japonica HOM05D005614 ORTHO05D006759 5.9e-97 358.2 291 61.2
ATR0684G165 Amborella trichopoda HOM05D005614 ORTHO05D006759 1.0e-96 357.5 278 65.5
SalBow7G1071 Salvia bowleyana HOM05D005614 ORTHO05D006759 1.1e-95 354.0 238 76.5
Hund27024 Selenicereus undatus HOM05D005614 ORTHO05D006759 1.0e-93 347.4 249 71.5
Ah.05g170870 Amaranthus hybridus HOM05D005614 ORTHO05D006759 8.9e-93 344.4 248 71.0
Zm00001eb208710 Zea mays HOM05D005614 ORTHO05D006759 8.9e-93 344.4 298 60.4
AUR62027890 Chenopodium quinoa HOM05D005614 ORTHO05D006759 5.7e-92 341.7 252 69.0
Manes.02G162200 Manihot esculenta HOM05D005614 ORTHO05D006759 4.1e-90 335.5 245 71.4
Gohir.D05G236900 Gossypium hirsutum HOM05D005614 ORTHO05D006759 5.6e-87 325.1 207 77.3
Duzib093G1836 Durio zibethinus HOM05D005614 ORTHO05D006759 9.5e-87 324.3 328 57.6
Nitab4.5_0000003g0570 Nicotiana tabacum HOM05D005614 ORTHO05D006759 4.7e-86 322.0 226 75.2
Pp3c2_3680 Physcomitrium patens HOM05D005614 ORTHO05D006759 8.0e-86 321.2 302 56.3
MELO3C008774.2 Cucumis melo HOM05D005614 ORTHO05D006759 2.0e-84 316.6 205 77.1
SGA_v2.0_scaffold31G12915 Striga asiatica HOM05D005614 ORTHO05D006759 2.6e-84 316.2 209 78.0
Mapoly0044s0012 Marchantia polymorpha HOM05D005614 ORTHO05D006759 2.4e-82 309.7 301 51.8
Nn8g39974 Nelumbo nucifera HOM05D005614 ORTHO05D006759 3.9e-80 302.4 229 68.6
Peaxi162Scf00689g00225 Petunia axillaris HOM05D005614 ORTHO05D006759 4.0e-77 292.4 206 73.8
Eucgr.G01112 Eucalyptus grandis HOM05D005614 ORTHO05D006759 9.2e-74 281.2 215 70.2
AUR62019050 Chenopodium quinoa HOM05D005614 ORTHO05D006759 1.7e-72 276.9 252 59.5
BcaNung05442 Brassica carinata HOM05D005614 ORTHO05D006759 7.3e-71 271.6 223 64.1
Oeu022164.1 Olea europaea HOM05D005614 ORTHO05D006759 1.1e-69 267.7 150 84.0
vmacro00825 Vaccinium macrocarpon HOM05D005614 ORTHO05D006759 1.1e-69 267.7 225 66.7
FAN24G3468 Fragaria x ananassa HOM05D005614 ORTHO05D006759 4.9e-67 258.8 439 41.9
MBI03_g33030_MAGBIO Magnolia biondii HOM05D005614 ORTHO05D006759 1.6e-65 253.8 253 56.1
Sabra05G0133300 Salix brachista HOM05D005614 ORTHO05D006759 3.5e-65 252.7 291 51.9
CBR_g36358 Chara braunii HOM05D005614 ORTHO05D006759 1.9e-63 246.9 314 44.3
CDE06G0499 Ceratophyllum demersum HOM05D005614 ORTHO05D006759 2.7e-57 226.5 184 63.6
Haze_00457 Corylus avellana HOM05D005614 ORTHO05D006759 2.1e-54 216.9 181 65.2
TPR.G24041 Trifolium pratense HOM05D005614 ORTHO05D006759 1.6e-49 200.7 178 60.7
TWI75G0111 Tripterygium wilfordii HOM05D005614 ORTHO05D006759 2.4e-45 186.8 204 56.4
CDE12G0551 Ceratophyllum demersum HOM05D005614 ORTHO05D006759 5.3e-45 185.7 135 69.6
Psat5g132360 Pisum sativum HOM05D005614 ORTHO05D006759 2.9e-43 179.9 164 59.8
Psat5g132400 Pisum sativum HOM05D005614 ORTHO05D006759 4.9e-43 179.1 124 68.5
TPR.G40310 Trifolium pratense HOM05D001808 ORTHO05D001747 2.4e-42 176.8 112 72.3
Lj4A622G15 Lonicera japonica HOM05D005614 ORTHO05D006759 1.2e-41 174.5 96 88.5
Lj4A622G16 Lonicera japonica HOM05D005614 ORTHO05D006759 2.7e-41 173.3 117 78.6
SEGI_11087 Sequoiadendron giganteum HOM05D005614 ORTHO05D006759 1.2e-36 157.9 97 78.4
Cre03.g172050 Chlamydomonas reinhardtii HOM05D005614 ORTHO05D006759 4.5e-36 156.0 288 35.4
Haze_00458 Corylus avellana HOM05D005614 ORTHO05D006759 7.1e-34 148.7 82 84.1
SEGI_10746 Sequoiadendron giganteum HOM05D005614 ORTHO05D006759 4.3e-31 139.4 143 51.0
MCO01G384 Micromonas commoda HOM05D005614 ORTHO05D006759 5.3e-29 132.5 257 35.0
Cfa025530 Carpinus fangiana HOM05D005614 ORTHO05D006759 2.1e-25 120.6 335 29.6
PRCOL_00005856 Prasinoderma coloniale HOM05D005614 ORTHO05D006759 1.0e-24 118.2 139 45.3
SMO358G0086 Selaginella moellendorffii HOM05D005614 ORTHO05D006759 1.8e-24 117.5 158 44.9
CAN.G964.16 Capsicum annuum HOM05D005614 ORTHO05D006759 8.7e-24 115.2 98 63.3
QL09p036498 Quercus lobata HOM05D005614 ORTHO05D006759 2.2e-22 110.5 66 78.8
RhsimUnG0102200 Rhododendron simsii HOM05D005614 ORTHO05D006759 1.1e-21 108.2 82 72.0
Rhsim02G0185400 Rhododendron simsii HOM05D005614 ORTHO05D006759 3.8e-19 99.8 79 68.4
Ca_31116_v3 Cicer arietinum L. HOM05D005614 ORTHO05D006759 1.4e-13 81.3 92 50.0
Rhsim03G0117800 Rhododendron simsii HOM05D005614 ORTHO05D006759 1.9e-10 70.9 93 47.3
TPR.G32 Trifolium pratense HOM05D005614 ORTHO05D006759 2.5e-10 70.5 31 87.1
SalBow3G3353 Salvia bowleyana HOM05D005614 ORTHO05D006759 1.8e-08 64.3 65 53.8


User provided reference genes

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