Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0020064 Camellia sinensis var. sinensis HOM05D000070 ORTHO05D006627 3.1e-51 204.9 110 100.0
CSS0018377 Camellia sinensis var. sinensis HOM05D000070 ORTHO05D006627 9.2e-51 203.4 110 99.1
Dinv05863 Davidia involucrata HOM05D000070 ORTHO05D006627 1.1e-43 179.9 109 89.0
TAR626G1726 Trochodendron aralioides HOM05D000070 ORTHO05D006627 1.6e-42 176.0 109 84.4
Rhsim01G0112400 Rhododendron simsii HOM05D000070 ORTHO05D006627 2.0e-42 175.6 110 85.5
Cpa.g.sc138.31 Carica papaya HOM05D000070 ORTHO05D006627 3.9e-41 171.4 109 82.6
Hma1.2p1_1220F.1_g268010 Hydrangea macrophylla HOM05D000070 ORTHO05D006627 8.6e-41 170.2 109 83.5
vmacro20772 Vaccinium macrocarpon HOM05D000070 ORTHO05D006627 8.6e-41 170.2 110 84.5
Ciclev10014090m.g Citrus clementina HOM05D000070 ORTHO05D006627 2.5e-40 168.7 109 80.7
COL.COLO4_30925 Corchorus olitorius HOM05D000070 ORTHO05D006627 2.5e-40 168.7 109 81.7
Duzib192G0613 Durio zibethinus HOM05D000070 ORTHO05D006627 2.5e-40 168.7 109 81.7
Thecc.06G135300 Theobroma cacao HOM05D000070 ORTHO05D006627 3.3e-40 168.3 109 82.6
MBI01_g11418_MAGBIO Magnolia biondii HOM05D000070 ORTHO05D006627 7.3e-40 167.2 109 81.7
Atru.chr10.621 Acer truncatum HOM05D000070 ORTHO05D006627 9.5e-40 166.8 109 80.7
Manes.11G051180 Manihot esculenta HOM05D000070 ORTHO05D006627 2.8e-39 165.2 109 81.7
Nn7g37939 Nelumbo nucifera HOM05D000070 ORTHO05D006627 3.6e-39 164.9 109 78.0
QL11p017850 Quercus lobata HOM05D000070 ORTHO05D006627 6.2e-39 164.1 108 78.7
TWI09G1172 Tripterygium wilfordii HOM05D000070 ORTHO05D006627 6.2e-39 164.1 109 79.8
MD05G1251500 Malus domestica HOM05D000070 ORTHO05D006627 8.0e-39 163.7 109 78.9
Sopen04g025820 Solanum pennellii HOM05D000070 ORTHO05D006627 1.8e-38 162.5 109 78.9
CiPaw.02G023600 Carya illinoinensis HOM05D000070 ORTHO05D006627 4.0e-38 161.4 109 79.8
Nitab4.5_0003485g0050 Nicotiana tabacum HOM05D000070 ORTHO05D006627 4.0e-38 161.4 110 78.2
Potri.001G174100 Populus trichocarpa HOM05D000070 ORTHO05D006627 5.2e-38 161.0 109 78.0
Solyc04g057960.4 Solanum lycopersicum HOM05D000070 ORTHO05D006627 5.2e-38 161.0 109 78.9
CANSAT35G0895 Cannabis sativa HOM05D000070 ORTHO05D006627 6.8e-38 160.6 109 78.0
GSVIVG01013614001 Vitis vinifera HOM05D000070 ORTHO05D006627 1.2e-37 159.8 109 78.9
CsaV3_1G046740 Cucumis sativus L. HOM05D000070 ORTHO05D006627 2.0e-37 159.1 109 74.3
Glyma.07G224000 Glycine max HOM05D000070 ORTHO05D006627 2.0e-37 159.1 109 77.1
HanXRQChr02g0040551 Helianthus annuus HOM05D000070 ORTHO05D006627 2.6e-37 158.7 109 76.1
Sc07g0007680 Simmondsia chinensis HOM05D000070 ORTHO05D006627 2.6e-37 158.7 109 79.8
Lj4g0001942 Lotus japonicus HOM05D000070 ORTHO05D006627 4.4e-37 157.9 109 76.1
MELO3C021783.2 Cucumis melo HOM05D000070 ORTHO05D006627 5.8e-37 157.5 109 74.3
DCAR_014363 Daucus carota HOM05D000070 ORTHO05D006627 5.8e-37 157.5 109 74.3
Lsat_1_v5_gn_1_6720 Lactuca sativa HOM05D000070 ORTHO05D006627 5.8e-37 157.5 109 76.1
PGR102G0872 Punica granatum HOM05D000070 ORTHO05D006627 5.8e-37 157.5 109 76.1
Oeu040394.2 Olea europaea HOM05D000070 ORTHO05D006627 7.5e-37 157.1 109 75.2
AUR62032439 Chenopodium quinoa HOM05D000070 ORTHO05D006627 9.8e-37 156.8 109 76.1
Prupe.4G112300 Prunus persica HOM05D000070 ORTHO05D006627 9.8e-37 156.8 109 76.1
Haze_04406 Corylus avellana HOM05D000070 ORTHO05D006627 1.3e-36 156.4 109 76.1
CAN.G405.6 Capsicum annuum HOM05D000070 ORTHO05D006627 1.7e-36 156.0 109 78.0
Nitab4.5_0000317g0130 Nicotiana tabacum HOM05D000070 ORTHO05D006627 1.7e-36 156.0 109 75.2
ECA247G0604 Erigeron canadensis HOM05D000070 ORTHO05D006627 2.2e-36 155.6 109 75.2
Ca_18785_v3 Cicer arietinum L. HOM05D000070 ORTHO05D006627 2.9e-36 155.2 109 74.3
FAN21G2030 Fragaria x ananassa HOM05D000070 ORTHO05D006627 2.9e-36 155.2 109 75.2
Aqoxy1G01537 Aquilegia oxysepala HOM05D000070 ORTHO05D006627 3.7e-36 154.8 109 78.9
AUR62024782 Chenopodium quinoa HOM05D000070 ORTHO05D006627 4.9e-36 154.5 109 75.2
Gorai.011G051500 Gossypium raimondii HOM05D000070 ORTHO05D006627 4.9e-36 154.5 96 83.3
SalBow7G0065 Salvia bowleyana HOM05D000070 ORTHO05D006627 4.9e-36 154.5 109 75.2
arahy.Tifrunner.gnm1.ann1.REAP7F Arachis hypogaea HOM05D000070 ORTHO05D006627 8.3e-36 153.7 109 74.3
RcHm_v2.0_Chr5g0020121 Rosa chinensis HOM05D000070 ORTHO05D006627 1.1e-35 153.3 109 74.3
FvH4_3g12310 Fragaria vesca HOM05D000070 ORTHO05D006627 1.4e-35 152.9 109 73.4
arahy.Tifrunner.gnm1.ann1.UR3YMK Arachis hypogaea HOM05D000070 ORTHO05D006627 1.9e-35 152.5 109 74.3
Actinidia01326 Actinidia chinensis HOM05D000070 ORTHO05D006627 2.4e-35 152.1 104 80.8
Cc10_g13650 Coffea canephora HOM05D000070 ORTHO05D006627 3.2e-35 151.8 109 73.4
Migut.C01080 Erythranthe guttata HOM05D000070 ORTHO05D006627 3.2e-35 151.8 110 74.5
FAN16G0001 Fragaria x ananassa HOM05D000070 ORTHO05D006627 3.2e-35 151.8 109 73.4
Phvul.002G100600 Phaseolus vulgaris HOM05D000070 ORTHO05D006627 2.1e-34 149.1 109 73.4
TPR.G9706 Trifolium pratense HOM05D000070 ORTHO05D006627 7.8e-34 147.1 109 70.6
Lalb_Chr05g0219821 Lupinus albus HOM05D000070 ORTHO05D006627 1.3e-33 146.4 109 70.6
PSO541G5972 Papaver somniferum HOM05D000070 ORTHO05D006627 5.0e-33 144.4 117 67.5
Ah.15g098730 Amaranthus hybridus HOM05D000070 ORTHO05D006627 1.5e-32 142.9 98 75.5
ClCG01G008970 Citrullus lanatus HOM05D000070 ORTHO05D006627 2.5e-32 142.1 99 72.7
Eucgr.E02009 Eucalyptus grandis HOM05D000070 ORTHO05D006627 4.3e-32 141.4 96 77.1
Sed0002344 Sechium edule HOM05D000070 ORTHO05D006627 5.6e-32 141.0 96 74.0
PSO675G1403 Papaver somniferum HOM05D000070 ORTHO05D006627 9.5e-32 140.2 117 67.5
Aa31LG3G18070 Aethionema arabicum HOM05D000065 ORTHO05D006627 4.7e-31 137.9 109 67.0
Sabra01G0137800 Salix brachista HOM05D000070 ORTHO05D006627 4.7e-31 137.9 96 74.0
BraA10t44876Z Brassica rapa HOM05D000070 ORTHO05D006627 8.1e-31 137.1 109 67.0
Sp6g34430 Schrenkiella parvula HOM05D000070 ORTHO05D006627 8.1e-31 137.1 109 67.0
BcaB08g37256 Brassica carinata HOM05D000070 ORTHO05D006627 1.4e-30 136.3 109 66.1
ATR0763G153 Amborella trichopoda HOM05D000070 ORTHO05D006627 2.3e-30 135.6 96 72.9
Carub.0006s0739 Capsella rubella HOM05D000070 ORTHO05D006627 2.3e-30 135.6 109 66.1
AL6G19130 Arabidopsis lyrata HOM05D000070 ORTHO05D006627 4.0e-30 134.8 109 66.1
CARHR204520 Cardamine hirsuta HOM05D000070 ORTHO05D006627 4.0e-30 134.8 109 65.1
Medtr4g083460 Medicago truncatula HOM05D000070 ORTHO05D006627 4.0e-30 134.8 100 71.0
BolC9t59597H Brassica oleracea HOM05D000070 ORTHO05D006627 5.2e-30 134.4 109 66.1
EL10Ac2g02462 Beta vulgaris HOM05D000070 ORTHO05D006627 6.8e-30 134.0 96 72.9
Thhalv10012497m.g Eutrema salsugineum HOM05D000070 ORTHO05D006627 6.8e-30 134.0 109 65.1
SGA_v2.0_scaffold2748G54197 Striga asiatica HOM05D000070 ORTHO05D006627 8.9e-30 133.7 97 74.2
AL487U10010 Arabidopsis lyrata HOM05D000070 ORTHO05D006627 1.2e-29 133.3 108 65.7
Peaxi162Scf00066g00526 Petunia axillaris HOM05D000070 ORTHO05D006627 1.2e-29 133.3 96 75.0
Hund09412 Selenicereus undatus HOM05D000070 ORTHO05D006627 1.2e-29 133.3 105 69.5
CDE02G2199 Ceratophyllum demersum HOM05D000070 ORTHO05D006627 2.6e-29 132.1 109 67.0
AT5G08470 Arabidopsis thaliana HOM05D000070 ORTHO05D006627 5.8e-29 131.0 109 65.1
Psat7g132840 Pisum sativum HOM05D000070 ORTHO05D006627 7.5e-29 130.6 96 70.8
A10p28270 Brassica napus HOM05D000070 ORTHO05D006627 3.7e-28 128.3 99 64.6
C09p68530 Brassica napus HOM05D000070 ORTHO05D006627 4.9e-28 127.9 108 61.1
Lj4A664G63 Lonicera japonica HOM05D000070 ORTHO05D006627 8.3e-28 127.1 84 78.6
Lj4A674G56 Lonicera japonica HOM05D000070 ORTHO05D006627 8.3e-28 127.1 84 78.6
SEGI_19101 Sequoiadendron giganteum HOM05D000070 ORTHO05D006627 3.5e-26 121.7 111 60.4
SEGI_30204 Sequoiadendron giganteum HOM05D000070 ORTHO05D006627 3.5e-26 121.7 111 60.4
SHI32169 Sapria himalayana HOM05D000002 ORTHO05D000001 5.6e-24 114.4 102 57.8
AagrBONN_evm.TU.Sc2ySwM_228.802 Anthoceros agrestis HOM05D000070 ORTHO05D006627 4.0e-22 108.2 114 55.3
Mapoly0173s0010 Marchantia polymorpha HOM05D000070 ORTHO05D006627 1.2e-21 106.7 113 54.0
Zm00001eb176300 Zea mays HOM05D000070 ORTHO05D006627 1.3e-20 103.2 108 49.1
Pp3c8_20390 Physcomitrium patens HOM05D000070 ORTHO05D006627 5.4e-19 97.8 112 48.2
Os08g0556550 Oryza sativa ssp. japonica HOM05D000070 ORTHO05D006627 1.3e-17 93.2 106 47.2
Gohir.A08G088224 Gossypium hirsutum HOM05D000070 ORTHO05D006627 4.7e-15 84.7 60 70.0
Gorai.002G198500 Gossypium raimondii HOM05D000070 ORTHO05D006627 6.2e-15 84.3 59 71.2
Gohir.D01G159950 Gossypium hirsutum HOM05D000070 ORTHO05D006627 4.2e-11 71.6 52 69.2
SMO236G0075 Selaginella moellendorffii HOM05D000070 ORTHO05D006627 2.1e-10 69.3 91 41.8
Eucgr.E01989 Eucalyptus grandis HOM05D000070 ORTHO05D006627 3.0e-09 65.5 44 77.3
MD10G1232000 Malus domestica HOM05D000070 ORTHO05D006627 4.8e-07 58.2 32 90.6
PRCOL_00006764 Prasinoderma coloniale HOM05D000070 ORTHO05D006627 1.1e-06 57.0 107 39.3


User provided reference genes

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