Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0018377 Camellia sinensis var. sinensis HOM05D000070 ORTHO05D006627 5.4e-51 204.1 110 100.0
CSS0020064 Camellia sinensis var. sinensis HOM05D000070 ORTHO05D006627 1.2e-50 203.0 110 99.1
Dinv05863 Davidia involucrata HOM05D000070 ORTHO05D006627 4.1e-43 177.9 109 88.1
TAR626G1726 Trochodendron aralioides HOM05D000070 ORTHO05D006627 6.0e-42 174.1 109 83.5
Rhsim01G0112400 Rhododendron simsii HOM05D000070 ORTHO05D006627 7.8e-42 173.7 110 84.5
Cpa.g.sc138.31 Carica papaya HOM05D000070 ORTHO05D006627 1.5e-40 169.5 109 81.7
Hma1.2p1_1220F.1_g268010 Hydrangea macrophylla HOM05D000070 ORTHO05D006627 3.3e-40 168.3 109 82.6
vmacro20772 Vaccinium macrocarpon HOM05D000070 ORTHO05D006627 3.3e-40 168.3 110 83.6
Ciclev10014090m.g Citrus clementina HOM05D000070 ORTHO05D006627 9.5e-40 166.8 109 79.8
COL.COLO4_30925 Corchorus olitorius HOM05D000070 ORTHO05D006627 9.5e-40 166.8 109 80.7
Duzib192G0613 Durio zibethinus HOM05D000070 ORTHO05D006627 9.5e-40 166.8 109 80.7
Thecc.06G135300 Theobroma cacao HOM05D000070 ORTHO05D006627 1.2e-39 166.4 109 81.7
MBI01_g11418_MAGBIO Magnolia biondii HOM05D000070 ORTHO05D006627 2.8e-39 165.2 109 80.7
Atru.chr10.621 Acer truncatum HOM05D000070 ORTHO05D006627 3.6e-39 164.9 109 79.8
Manes.11G051180 Manihot esculenta HOM05D000070 ORTHO05D006627 1.1e-38 163.3 109 80.7
Nn7g37939 Nelumbo nucifera HOM05D000070 ORTHO05D006627 1.4e-38 162.9 109 77.1
Nitab4.5_0003485g0050 Nicotiana tabacum HOM05D000070 ORTHO05D006627 2.3e-38 162.2 110 79.1
QL11p017850 Quercus lobata HOM05D000070 ORTHO05D006627 2.3e-38 162.2 108 77.8
TWI09G1172 Tripterygium wilfordii HOM05D000070 ORTHO05D006627 2.3e-38 162.2 109 78.9
MD05G1251500 Malus domestica HOM05D000070 ORTHO05D006627 3.1e-38 161.8 109 78.0
Sopen04g025820 Solanum pennellii HOM05D000070 ORTHO05D006627 6.8e-38 160.6 109 78.0
CANSAT35G0895 Cannabis sativa HOM05D000070 ORTHO05D006627 1.2e-37 159.8 109 78.0
CiPaw.02G023600 Carya illinoinensis HOM05D000070 ORTHO05D006627 1.5e-37 159.5 109 78.9
Potri.001G174100 Populus trichocarpa HOM05D000070 ORTHO05D006627 2.0e-37 159.1 109 77.1
Solyc04g057960.4 Solanum lycopersicum HOM05D000070 ORTHO05D006627 2.0e-37 159.1 109 78.0
GSVIVG01013614001 Vitis vinifera HOM05D000070 ORTHO05D006627 4.4e-37 157.9 109 78.0
CsaV3_1G046740 Cucumis sativus L. HOM05D000070 ORTHO05D006627 7.5e-37 157.1 109 73.4
Glyma.07G224000 Glycine max HOM05D000070 ORTHO05D006627 7.5e-37 157.1 109 76.1
HanXRQChr02g0040551 Helianthus annuus HOM05D000070 ORTHO05D006627 9.8e-37 156.8 109 75.2
Nitab4.5_0000317g0130 Nicotiana tabacum HOM05D000070 ORTHO05D006627 9.8e-37 156.8 109 76.1
Sc07g0007680 Simmondsia chinensis HOM05D000070 ORTHO05D006627 9.8e-37 156.8 109 78.9
ECA247G0604 Erigeron canadensis HOM05D000070 ORTHO05D006627 1.3e-36 156.4 109 76.1
Lj4g0001942 Lotus japonicus HOM05D000070 ORTHO05D006627 1.7e-36 156.0 109 75.2
MELO3C021783.2 Cucumis melo HOM05D000070 ORTHO05D006627 2.2e-36 155.6 109 73.4
DCAR_014363 Daucus carota HOM05D000070 ORTHO05D006627 2.2e-36 155.6 109 73.4
Lsat_1_v5_gn_1_6720 Lactuca sativa HOM05D000070 ORTHO05D006627 2.2e-36 155.6 109 75.2
PGR102G0872 Punica granatum HOM05D000070 ORTHO05D006627 2.2e-36 155.6 109 75.2
Oeu040394.2 Olea europaea HOM05D000070 ORTHO05D006627 2.9e-36 155.2 109 74.3
AUR62032439 Chenopodium quinoa HOM05D000070 ORTHO05D006627 3.7e-36 154.8 109 75.2
Prupe.4G112300 Prunus persica HOM05D000070 ORTHO05D006627 3.7e-36 154.8 109 75.2
Haze_04406 Corylus avellana HOM05D000070 ORTHO05D006627 4.9e-36 154.5 109 75.2
CAN.G405.6 Capsicum annuum HOM05D000070 ORTHO05D006627 6.4e-36 154.1 109 77.1
Gorai.011G051500 Gossypium raimondii HOM05D000070 ORTHO05D006627 6.4e-36 154.1 96 83.3
Ca_18785_v3 Cicer arietinum L. HOM05D000070 ORTHO05D006627 1.1e-35 153.3 109 73.4
FAN21G2030 Fragaria x ananassa HOM05D000070 ORTHO05D006627 1.1e-35 153.3 109 74.3
Aqoxy1G01537 Aquilegia oxysepala HOM05D000070 ORTHO05D006627 1.4e-35 152.9 109 78.0
AUR62024782 Chenopodium quinoa HOM05D000070 ORTHO05D006627 1.9e-35 152.5 109 74.3
SalBow7G0065 Salvia bowleyana HOM05D000070 ORTHO05D006627 1.9e-35 152.5 109 74.3
Actinidia01326 Actinidia chinensis HOM05D000070 ORTHO05D006627 2.4e-35 152.1 104 80.8
arahy.Tifrunner.gnm1.ann1.REAP7F Arachis hypogaea HOM05D000070 ORTHO05D006627 3.2e-35 151.8 109 73.4
RcHm_v2.0_Chr5g0020121 Rosa chinensis HOM05D000070 ORTHO05D006627 4.1e-35 151.4 109 73.4
FvH4_3g12310 Fragaria vesca HOM05D000070 ORTHO05D006627 5.4e-35 151.0 109 72.5
arahy.Tifrunner.gnm1.ann1.UR3YMK Arachis hypogaea HOM05D000070 ORTHO05D006627 7.0e-35 150.6 109 73.4
Cc10_g13650 Coffea canephora HOM05D000070 ORTHO05D006627 1.2e-34 149.8 109 72.5
Migut.C01080 Erythranthe guttata HOM05D000070 ORTHO05D006627 1.2e-34 149.8 110 73.6
FAN16G0001 Fragaria x ananassa HOM05D000070 ORTHO05D006627 1.2e-34 149.8 109 72.5
Phvul.002G100600 Phaseolus vulgaris HOM05D000070 ORTHO05D006627 7.8e-34 147.1 109 72.5
TPR.G9706 Trifolium pratense HOM05D000070 ORTHO05D006627 3.0e-33 145.2 109 69.7
Lalb_Chr05g0219821 Lupinus albus HOM05D000070 ORTHO05D006627 5.0e-33 144.4 109 69.7
Ah.15g098730 Amaranthus hybridus HOM05D000070 ORTHO05D006627 1.5e-32 142.9 98 75.5
PSO541G5972 Papaver somniferum HOM05D000070 ORTHO05D006627 1.9e-32 142.5 117 66.7
Eucgr.E02009 Eucalyptus grandis HOM05D000070 ORTHO05D006627 5.6e-32 141.0 96 77.1
ClCG01G008970 Citrullus lanatus HOM05D000070 ORTHO05D006627 7.3e-32 140.6 97 73.2
Sed0002344 Sechium edule HOM05D000070 ORTHO05D006627 7.3e-32 140.6 96 74.0
Aa31LG3G18070 Aethionema arabicum HOM05D000065 ORTHO05D006627 2.1e-31 139.0 109 67.9
BraA10t44876Z Brassica rapa HOM05D000070 ORTHO05D006627 3.6e-31 138.3 109 67.9
PSO675G1403 Papaver somniferum HOM05D000070 ORTHO05D006627 3.6e-31 138.3 117 66.7
Sp6g34430 Schrenkiella parvula HOM05D000070 ORTHO05D006627 3.6e-31 138.3 109 67.9
BcaB08g37256 Brassica carinata HOM05D000070 ORTHO05D006627 6.2e-31 137.5 109 67.0
Sabra01G0137800 Salix brachista HOM05D000070 ORTHO05D006627 6.2e-31 137.5 96 74.0
Carub.0006s0739 Capsella rubella HOM05D000070 ORTHO05D006627 1.1e-30 136.7 109 67.0
AL6G19130 Arabidopsis lyrata HOM05D000070 ORTHO05D006627 1.8e-30 136.0 109 67.0
BolC9t59597H Brassica oleracea HOM05D000070 ORTHO05D006627 2.3e-30 135.6 109 67.0
CARHR204520 Cardamine hirsuta HOM05D000070 ORTHO05D006627 2.3e-30 135.6 109 66.1
ATR0763G153 Amborella trichopoda HOM05D000070 ORTHO05D006627 3.1e-30 135.2 96 72.9
Thhalv10012497m.g Eutrema salsugineum HOM05D000070 ORTHO05D006627 3.1e-30 135.2 109 66.1
AL487U10010 Arabidopsis lyrata HOM05D000070 ORTHO05D006627 6.8e-30 134.0 108 66.7
EL10Ac2g02462 Beta vulgaris HOM05D000070 ORTHO05D006627 8.9e-30 133.7 96 72.9
SGA_v2.0_scaffold2748G54197 Striga asiatica HOM05D000070 ORTHO05D006627 8.9e-30 133.7 97 74.2
Medtr4g083460 Medicago truncatula HOM05D000070 ORTHO05D006627 1.5e-29 132.9 100 70.0
Peaxi162Scf00066g00526 Petunia axillaris HOM05D000070 ORTHO05D006627 1.5e-29 132.9 96 75.0
Hund09412 Selenicereus undatus HOM05D000070 ORTHO05D006627 1.5e-29 132.9 105 69.5
AT5G08470 Arabidopsis thaliana HOM05D000070 ORTHO05D006627 2.6e-29 132.1 109 66.1
CDE02G2199 Ceratophyllum demersum HOM05D000070 ORTHO05D006627 7.5e-29 130.6 109 66.1
Psat7g132840 Pisum sativum HOM05D000070 ORTHO05D006627 9.9e-29 130.2 96 70.8
A10p28270 Brassica napus HOM05D000070 ORTHO05D006627 6.4e-28 127.5 98 65.3
C09p68530 Brassica napus HOM05D000070 ORTHO05D006627 8.3e-28 127.1 108 61.1
Lj4A664G63 Lonicera japonica HOM05D000070 ORTHO05D006627 8.3e-28 127.1 84 78.6
Lj4A674G56 Lonicera japonica HOM05D000070 ORTHO05D006627 8.3e-28 127.1 84 78.6
SEGI_19101 Sequoiadendron giganteum HOM05D000070 ORTHO05D006627 1.3e-25 119.8 111 59.5
SEGI_30204 Sequoiadendron giganteum HOM05D000070 ORTHO05D006627 1.3e-25 119.8 111 59.5
SHI32169 Sapria himalayana HOM05D000002 ORTHO05D000001 2.5e-24 115.5 102 58.8
AagrBONN_evm.TU.Sc2ySwM_228.802 Anthoceros agrestis HOM05D000070 ORTHO05D006627 1.5e-21 106.3 114 54.4
Mapoly0173s0010 Marchantia polymorpha HOM05D000070 ORTHO05D006627 4.4e-21 104.8 113 53.1
Zm00001eb176300 Zea mays HOM05D000070 ORTHO05D006627 7.6e-21 104.0 108 50.0
Pp3c8_20390 Physcomitrium patens HOM05D000070 ORTHO05D006627 3.2e-19 98.6 112 49.1
Os08g0556550 Oryza sativa ssp. japonica HOM05D000070 ORTHO05D006627 7.8e-18 94.0 106 48.1
Gohir.A08G088224 Gossypium hirsutum HOM05D000070 ORTHO05D006627 4.7e-15 84.7 60 70.0
Gorai.002G198500 Gossypium raimondii HOM05D000070 ORTHO05D006627 6.2e-15 84.3 59 71.2
Gohir.D01G159950 Gossypium hirsutum HOM05D000070 ORTHO05D006627 4.2e-11 71.6 52 69.2
SMO236G0075 Selaginella moellendorffii HOM05D000070 ORTHO05D006627 2.1e-10 69.3 91 41.8
Eucgr.E01989 Eucalyptus grandis HOM05D000070 ORTHO05D006627 3.0e-09 65.5 44 77.3
PRCOL_00006764 Prasinoderma coloniale HOM05D000070 ORTHO05D006627 8.1e-07 57.4 107 39.3
MD10G1232000 Malus domestica HOM05D000070 ORTHO05D006627 1.8e-06 56.2 32 87.5


User provided reference genes

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