Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0017636 Camellia sinensis var. sinensis HOM05D005579 ORTHO05D006775 0.0e+00 2281.5 1141 100.0
CSS0047196 Camellia sinensis var. sinensis HOM05D005579 ORTHO05D006775 0.0e+00 2237.2 1141 98.5
Dinv28443 Davidia involucrata HOM05D005579 ORTHO05D006775 0.0e+00 1404.0 1190 63.7
Actinidia32860 Actinidia chinensis HOM05D005579 ORTHO05D006775 0.0e+00 1268.8 1101 62.7
QL09p014220 Quercus lobata HOM05D005579 ORTHO05D006775 0.0e+00 1114.0 1182 52.8
TAR367G0001 Trochodendron aralioides HOM05D005579 ORTHO05D006775 0.0e+00 1101.3 1204 51.5
GSVIVG01028977001 Vitis vinifera HOM05D005579 ORTHO05D006775 0.0e+00 1098.2 1297 49.9
Cfa008319 Carpinus fangiana HOM05D005579 ORTHO05D006775 0.0e+00 1092.4 1184 52.5
CiPaw.04G071000 Carya illinoinensis HOM05D005579 ORTHO05D006775 5.2e-306 1054.7 1168 51.2
Ciclev10006492m.g Citrus clementina HOM05D005579 ORTHO05D006775 8.3e-288 994.2 1171 49.0
Duzib068G1336 Durio zibethinus HOM05D005579 ORTHO05D006775 1.2e-281 973.8 1191 48.5
Rhsim03G0180800 Rhododendron simsii HOM05D005579 ORTHO05D006775 2.0e-281 973.0 1177 49.8
Cc02_g02990 Coffea canephora HOM05D005579 ORTHO05D006775 6.2e-267 924.9 1191 46.5
Peaxi162Scf00444g00841 Petunia axillaris HOM05D005579 ORTHO05D006775 1.3e-264 917.1 1216 45.3
Nn6g33500 Nelumbo nucifera HOM05D005579 ORTHO05D006775 4.6e-262 908.7 1178 46.6
Nitab4.5_0009681g0030 Nicotiana tabacum HOM05D005579 ORTHO05D006775 8.9e-258 894.4 1194 45.5
Solyc03g025820.3 Solanum lycopersicum HOM05D005579 ORTHO05D006775 8.9e-258 894.4 1195 45.6
Sopen03g004630 Solanum pennellii HOM05D005579 ORTHO05D006775 2.0e-257 893.3 1188 45.9
Gohir.D12G259200 Gossypium hirsutum HOM05D005579 ORTHO05D006775 7.6e-257 891.3 1101 48.0
Nitab4.5_0000716g0010 Nicotiana tabacum HOM05D005579 ORTHO05D006775 2.9e-256 889.4 1195 45.4
Hma1.2p1_0270F.1_g108020 Hydrangea macrophylla HOM05D005579 ORTHO05D006775 4.0e-250 869.0 822 59.6
TWI23G0169 Tripterygium wilfordii HOM05D005579 ORTHO05D006775 4.0e-250 869.0 1186 45.6
Gorai.008G277600 Gossypium raimondii HOM05D005579 ORTHO05D006775 2.1e-246 856.7 1073 48.0
CAN.G490.30 Capsicum annuum HOM05D005579 ORTHO05D006775 3.5e-246 855.9 1195 43.5
COL.COLO4_14309 Corchorus olitorius HOM05D005579 ORTHO05D006775 1.3e-240 837.4 1188 44.0
Cpa.g.sc107.52 Carica papaya HOM05D005579 ORTHO05D006775 2.3e-237 826.6 1179 44.7
Gohir.A12G257850 Gossypium hirsutum HOM05D005579 ORTHO05D006775 5.6e-236 822.0 1071 46.7
Sed0022815 Sechium edule HOM05D005579 ORTHO05D006775 1.4e-231 807.4 1167 42.6
Lj2g0003134 Lotus japonicus HOM05D005579 ORTHO05D006775 1.2e-230 804.3 1177 43.6
Sc13g0008650 Simmondsia chinensis HOM05D005579 ORTHO05D006775 1.5e-228 797.3 1166 43.5
Phvul.004G117000 Phaseolus vulgaris HOM05D005579 ORTHO05D006775 5.3e-226 788.9 1188 42.8
Glyma.09G139400 Glycine max HOM05D005579 ORTHO05D006775 4.5e-225 785.8 1159 43.4
Thecc.03G176600 Theobroma cacao HOM05D005579 ORTHO05D006775 2.9e-224 783.1 1172 42.4
DCAR_018198 Daucus carota HOM05D005579 ORTHO05D006775 5.0e-224 782.3 1194 42.2
ClCG09G012930 Citrullus lanatus HOM05D005579 ORTHO05D006775 1.5e-220 770.8 1192 41.9
PGR142G3926 Punica granatum HOM05D005579 ORTHO05D006775 1.5e-220 770.8 1192 41.4
VMungo0464G1636 Vigna mungo HOM05D005579 ORTHO05D006775 1.8e-218 763.8 1168 42.5
CsaV3_3G049940 Cucumis sativus L. HOM05D005579 ORTHO05D006775 9.0e-218 761.5 1178 41.8
TPR.G10740 Trifolium pratense HOM05D005579 ORTHO05D006775 1.5e-217 760.8 1163 41.6
Psat0s2227g0080 Pisum sativum HOM05D005579 ORTHO05D006775 4.4e-212 742.7 1157 41.6
EL10Ac3g05643 Beta vulgaris HOM05D005579 ORTHO05D006775 1.3e-208 731.1 1271 38.9
Haze_13712 Corylus avellana HOM05D005579 ORTHO05D006775 3.3e-204 716.5 742 55.4
Medtr6g045357 Medicago truncatula HOM05D005579 ORTHO05D006775 6.3e-203 712.2 1143 40.9
Atru.chr1.458 Acer truncatum HOM05D005579 ORTHO05D006775 2.5e-199 700.3 785 52.7
AL8G26680 Arabidopsis lyrata HOM05D005579 ORTHO05D006775 5.7e-196 689.1 1187 39.8
Ah.07g207210 Amaranthus hybridus HOM05D005579 ORTHO05D006775 1.3e-195 688.0 1199 38.9
CARHR265270 Cardamine hirsuta HOM05D005579 ORTHO05D006775 1.7e-195 687.6 1156 40.3
Prupe.2G294300 Prunus persica HOM05D005579 ORTHO05D006775 6.3e-195 685.6 737 53.3
Thhalv10015364m.g Eutrema salsugineum HOM05D005579 ORTHO05D006775 1.6e-193 681.0 1193 40.2
Sp6g14550 Schrenkiella parvula HOM05D005579 ORTHO05D006775 8.5e-192 675.2 1185 39.5
AL271U10020 Arabidopsis lyrata HOM05D005579 ORTHO05D006775 3.2e-191 673.3 1187 39.4
MELO3C003322.2 Cucumis melo HOM05D005579 ORTHO05D006775 1.2e-190 671.4 1177 39.8
AT5G52290 Arabidopsis thaliana HOM05D005579 ORTHO05D006775 3.6e-190 669.8 1184 39.5
Carub.0008s1239 Capsella rubella HOM05D005579 ORTHO05D006775 6.8e-189 665.6 1127 40.2
FvH4_7g29470 Fragaria vesca HOM05D005579 ORTHO05D006775 1.3e-187 661.4 746 52.1
Potri.012G141100 Populus trichocarpa HOM05D005579 ORTHO05D006775 1.3e-187 661.4 760 52.2
RcHm_v2.0_Chr1g0377251 Rosa chinensis HOM05D005579 ORTHO05D006775 5.9e-185 652.5 721 52.0
THA.LOC104800252 Tarenaya hassleriana HOM05D005579 ORTHO05D006775 1.0e-184 651.7 1190 37.2
FAN06G0670 Fragaria x ananassa HOM05D005579 ORTHO05D006775 1.0e-181 641.7 766 50.4
FAN01G1040 Fragaria x ananassa HOM05D005579 ORTHO05D006775 1.2e-180 638.3 735 51.2
Sabra12G0106200 Salix brachista HOM05D005579 ORTHO05D006775 3.4e-180 636.7 783 49.6
Aa31LG3G8710 Aethionema arabicum HOM05D005579 ORTHO05D006775 6.3e-179 632.5 1186 38.2
BcaB01g04199 Brassica carinata HOM05D005579 ORTHO05D006775 1.1e-178 631.7 1138 39.3
C03p18410 Brassica napus HOM05D005579 ORTHO05D006775 3.1e-178 630.2 1163 38.5
MD07G1268700 Malus domestica HOM05D005579 ORTHO05D006775 1.6e-177 627.9 740 50.8
A03p15740 Brassica napus HOM05D005579 ORTHO05D006775 1.3e-176 624.8 1160 38.2
BcaC01g06176 Brassica carinata HOM05D005579 ORTHO05D006775 6.6e-176 622.5 1165 38.2
FAN03G0333 Fragaria x ananassa HOM05D005579 ORTHO05D006775 1.9e-175 620.9 708 52.7
MBI17_g46332_MAGBIO Magnolia biondii HOM05D005579 ORTHO05D006775 1.9e-175 620.9 847 43.4
MBI17_g39341_MAGBIO Magnolia biondii HOM05D005579 ORTHO05D006775 3.6e-174 616.7 1004 40.4
FAN06G0715 Fragaria x ananassa HOM05D005579 ORTHO05D006775 1.8e-173 614.4 682 52.1
FAN03G0790 Fragaria x ananassa HOM05D005579 ORTHO05D006775 5.2e-173 612.8 721 51.2
BraA03t10864Z Brassica rapa HOM05D005579 ORTHO05D006775 2.4e-170 604.0 1224 36.2
BolC3t14238H Brassica oleracea HOM05D005579 ORTHO05D006775 5.4e-170 602.8 1225 36.2
Manes.06G147100 Manihot esculenta HOM05D005579 ORTHO05D006775 1.6e-169 601.3 737 48.4
CANSAT21G2370 Cannabis sativa HOM05D005579 ORTHO05D006775 1.2e-161 575.1 729 49.1
Migut.F00340 Erythranthe guttata HOM05D005579 ORTHO05D006775 9.5e-159 565.5 745 46.6
PGSC0003DMG400014341 Solanum tuberosum HOM05D005579 ORTHO05D006775 7.1e-154 549.3 682 47.9
SGA_v2.0_scaffold60G21038 Striga asiatica HOM05D005579 ORTHO05D006775 4.7e-150 536.6 748 45.9
Oeu056255.1 Olea europaea HOM05D005579 ORTHO05D006775 6.4e-147 526.2 590 50.5
ECA232G1470 Erigeron canadensis HOM05D005579 ORTHO05D006775 3.5e-145 520.4 702 47.6
SalBow4G1821 Salvia bowleyana HOM05D005579 ORTHO05D006775 1.7e-144 518.1 780 43.6
SalBow4G2278 Salvia bowleyana HOM05D005579 ORTHO05D006775 1.7e-144 518.1 780 43.6
MD01G1200800 Malus domestica HOM05D005579 ORTHO05D006775 3.6e-142 510.4 731 43.8
Eucgr.L01677 Eucalyptus grandis HOM05D005579 ORTHO05D006775 6.2e-142 509.6 639 46.8
PSO063G6446 Papaver somniferum HOM05D005579 ORTHO05D006775 3.1e-141 507.3 687 44.4
HanXRQChr15g0495541 Helianthus annuus HOM05D005579 ORTHO05D006775 3.2e-138 497.3 680 47.5
PSO782G1268 Papaver somniferum HOM05D005579 ORTHO05D006775 1.6e-137 495.0 687 44.5
Lsat_1_v5_gn_9_55980 Lactuca sativa HOM05D005579 ORTHO05D006775 3.0e-136 490.7 676 46.6
AUR62021193 Chenopodium quinoa HOM05D005579 ORTHO05D006775 5.8e-132 476.5 762 41.6
AUR62015985 Chenopodium quinoa HOM05D005579 ORTHO05D006775 3.9e-128 463.8 745 41.1
Lalb_Chr19g0130861 Lupinus albus HOM05D005579 ORTHO05D006775 2.1e-126 458.0 773 41.9
Os02g0642600 Oryza sativa ssp. japonica HOM05D005579 ORTHO05D006775 9.9e-124 449.1 1217 30.4
arahy.Tifrunner.gnm1.ann1.TEHT7Q Arachis hypogaea HOM05D005579 ORTHO05D006775 1.3e-120 438.7 665 45.0
arahy.Tifrunner.gnm1.ann1.Q0IWYL Arachis hypogaea HOM05D005579 ORTHO05D006775 6.9e-117 426.4 660 44.5
Zm00001eb248620 Zea mays HOM05D005579 ORTHO05D006775 9.0e-117 426.0 1277 29.8
HPP92_008526 Vanilla planifolia HOM05D005579 ORTHO05D006775 2.7e-113 414.5 716 37.4
ATR0680G156 Amborella trichopoda HOM05D005579 ORTHO05D006775 2.0e-108 398.3 803 35.5
FAN10G2011 Fragaria x ananassa HOM05D005579 ORTHO05D006775 5.9e-108 396.7 330 64.2
FAN10G0535 Fragaria x ananassa HOM05D005579 ORTHO05D006775 2.6e-100 371.3 503 46.5
SHI39775 Sapria himalayana HOM05D005579 ORTHO05D006775 3.9e-96 357.5 727 37.0
Haze_13711 Corylus avellana HOM05D005579 ORTHO05D006775 2.7e-81 308.1 365 45.8
unitig_37.g12526 Utricularia gibba HOM05D005579 ORTHO05D006775 8.0e-73 280.0 597 37.7
Hund11748 Selenicereus undatus HOM05D005579 ORTHO05D006775 2.1e-65 255.4 509 36.9
CDE08G0179 Ceratophyllum demersum HOM05D005579 ORTHO05D006775 2.3e-56 225.3 592 32.1
Actinidia34112 Actinidia chinensis HOM05D005579 ORTHO05D006775 2.2e-54 218.8 164 72.0
Mapoly0013s0198 Marchantia polymorpha HOM05D005579 ORTHO05D006775 1.5e-50 206.1 533 29.8
Hund11747 Selenicereus undatus HOM05D005579 ORTHO05D006775 2.1e-44 185.7 234 45.3
SMO364G0179 Selaginella moellendorffii HOM05D005579 ORTHO05D006775 8.6e-43 180.3 247 42.1
MBI17_g46331_MAGBIO Magnolia biondii HOM05D005579 ORTHO05D006775 4.7e-41 174.5 282 40.1
Pp3c13_14750 Physcomitrium patens HOM05D005579 ORTHO05D006775 2.1e-33 149.1 225 38.2
Pp3c21_13440 Physcomitrium patens HOM05D005579 ORTHO05D006775 3.8e-30 138.3 228 32.0
CDE08G1090 Ceratophyllum demersum HOM05D005579 ORTHO05D006775 9.2e-29 133.7 103 63.1
SEGI_30883 Sequoiadendron giganteum HOM05D005579 ORTHO05D006775 1.9e-18 99.4 271 27.3
Oeu024225.1 Olea europaea HOM05D002251 ORTHO05D006775 2.7e-12 79.0 320 29.4
CBR_g61457 Chara braunii HOM05D005579 ORTHO05D006775 5.1e-11 74.7 145 31.7
TPR.G17624 Trifolium pratense HOM05D005579 ORTHO05D006775 1.5e-10 73.2 149 36.2
TPR.G31959 Trifolium pratense HOM05D061576 ORTHO05D006775 3.1e-08 65.5 143 31.5
SalBow1G5008 Salvia bowleyana HOM05D045082 ORTHO05D006775 8.4e-06 57.4 36 72.2
SalBow1G5207 Salvia bowleyana HOM05D045082 ORTHO05D006775 8.4e-06 57.4 36 72.2


User provided reference genes

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