Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0017191 Camellia sinensis var. sinensis HOM05D007322 ORTHO05D009029 4.9e-256 887.9 668 100.0
Dinv24285 Davidia involucrata HOM05D007322 ORTHO05D009029 2.4e-194 682.9 669 82.2
Hma1.2p1_0217F.1_g092060 Hydrangea macrophylla HOM05D007322 ORTHO05D009029 3.8e-168 595.9 599 79.5
GSVIVG01022920001 Vitis vinifera HOM05D007322 ORTHO05D009029 1.5e-164 583.9 642 78.0
Rhsim01G0008000 Rhododendron simsii HOM05D007322 ORTHO05D009029 6.0e-161 572.0 665 76.4
Duzib132G0092 Durio zibethinus HOM05D007322 ORTHO05D009029 1.0e-160 571.2 662 74.8
Lsat_1_v5_gn_5_105200 Lactuca sativa HOM05D007322 ORTHO05D009029 1.9e-154 550.4 678 71.7
Potri.003G019000 Populus trichocarpa HOM05D007322 ORTHO05D009029 2.1e-153 547.0 590 78.3
RcHm_v2.0_Chr7g0222211 Rosa chinensis HOM05D007322 ORTHO05D009029 7.8e-153 545.0 671 72.9
HanXRQChr10g0290611 Helianthus annuus HOM05D007322 ORTHO05D009029 1.7e-152 543.9 668 71.1
Prupe.1G569600 Prunus persica HOM05D007322 ORTHO05D009029 8.6e-152 541.6 661 72.2
MD15G1423900 Malus domestica HOM05D007322 ORTHO05D009029 2.5e-151 540.0 647 73.7
QL10p025368 Quercus lobata HOM05D007322 ORTHO05D009029 4.7e-150 535.8 771 52.9
Potri.001G211300 Populus trichocarpa HOM05D007322 ORTHO05D009029 2.3e-149 533.5 588 76.9
TWI14G1121 Tripterygium wilfordii HOM05D007322 ORTHO05D009029 4.0e-149 532.7 668 71.4
FvH4_5g29340 Fragaria vesca HOM05D007322 ORTHO05D009029 8.9e-149 531.6 608 76.3
Sabra03G0010600 Salix brachista HOM05D007322 ORTHO05D009029 1.5e-148 530.8 678 71.8
Cfa005519 Carpinus fangiana HOM05D007322 ORTHO05D009029 3.4e-148 529.6 589 78.6
FAN18G2556 Fragaria x ananassa HOM05D007322 ORTHO05D009029 2.9e-147 526.6 608 76.3
Thecc.02G087000 Theobroma cacao HOM05D007322 ORTHO05D009029 7.1e-146 521.9 665 72.6
COL.COLO4_11791 Corchorus olitorius HOM05D007322 ORTHO05D009029 2.7e-145 520.0 667 71.8
Sed0025924 Sechium edule HOM05D007322 ORTHO05D009029 3.5e-145 519.6 590 76.8
Thhalv10007006m.g Eutrema salsugineum HOM05D007322 ORTHO05D009029 1.7e-144 517.3 594 75.3
CARHR011130 Cardamine hirsuta HOM05D007322 ORTHO05D009029 5.1e-144 515.8 594 76.8
CiPaw.05G044700 Carya illinoinensis HOM05D007322 ORTHO05D009029 5.1e-144 515.8 558 81.0
Migut.B00834 Erythranthe guttata HOM05D007322 ORTHO05D009029 8.1e-142 508.4 669 69.8
Cc02_g22530 Coffea canephora HOM05D007322 ORTHO05D009029 1.1e-141 508.1 671 69.9
CsaV3_3G043150 Cucumis sativus L. HOM05D007322 ORTHO05D009029 8.9e-141 505.0 667 68.8
Sp1g09630 Schrenkiella parvula HOM05D007322 ORTHO05D009029 2.6e-140 503.4 657 67.7
Glyma.08G186600 Glycine max HOM05D007322 ORTHO05D009029 3.4e-140 503.1 616 72.7
Gorai.005G242500 Gossypium raimondii HOM05D007322 ORTHO05D009029 4.4e-140 502.7 664 69.4
BraA06t23970Z Brassica rapa HOM05D007322 ORTHO05D009029 5.8e-140 502.3 652 67.6
AT1G10910 Arabidopsis thaliana HOM05D007322 ORTHO05D009029 7.6e-140 501.9 639 72.0
A06p07690 Brassica napus HOM05D007322 ORTHO05D009029 2.9e-139 500.0 652 69.0
MELO3C026617.2 Cucumis melo HOM05D007322 ORTHO05D009029 2.9e-139 500.0 667 68.4
BcaNung04765 Brassica carinata HOM05D007322 ORTHO05D009029 4.9e-139 499.2 646 68.1
Gohir.D02G214700 Gossypium hirsutum HOM05D007322 ORTHO05D009029 2.4e-138 496.9 664 68.7
C05p09280 Brassica napus HOM05D007322 ORTHO05D009029 3.2e-138 496.5 661 67.9
Atru.chr6.627 Acer truncatum HOM05D007322 ORTHO05D009029 1.2e-137 494.6 534 80.9
Lj6g0009763 Lotus japonicus HOM05D007322 ORTHO05D009029 3.5e-137 493.0 612 72.4
BcaC05g24974 Brassica carinata HOM05D007322 ORTHO05D009029 3.9e-136 489.6 660 66.4
BolC5t29668H Brassica oleracea HOM05D007322 ORTHO05D009029 6.6e-136 488.8 651 68.5
Lj9C305T7 Lonicera japonica HOM05D007322 ORTHO05D009029 1.1e-135 488.0 667 63.9
Gohir.A03G193600 Gossypium hirsutum HOM05D007322 ORTHO05D009029 5.6e-135 485.7 664 67.6
Carub.0001s1049 Capsella rubella HOM05D007322 ORTHO05D009029 4.8e-134 482.6 643 69.4
Ciclev10000525m.g Citrus clementina HOM05D007322 ORTHO05D009029 5.3e-133 479.2 642 70.4
vmacro19889 Vaccinium macrocarpon HOM05D007322 ORTHO05D009029 9.0e-133 478.4 570 77.4
THA.LOC104816934 Tarenaya hassleriana HOM05D007322 ORTHO05D009029 5.8e-132 475.7 668 65.9
CAN.G1021.1 Capsicum annuum HOM05D007322 ORTHO05D009029 7.6e-132 475.3 587 74.3
PGR042G2216 Punica granatum HOM05D007322 ORTHO05D009029 1.1e-130 471.5 637 68.6
Psat1g220200 Pisum sativum HOM05D007322 ORTHO05D009029 7.1e-130 468.8 612 70.4
Manes.07G016500 Manihot esculenta HOM05D007322 ORTHO05D009029 3.0e-128 463.4 532 77.8
MBI04_g34119_MAGBIO Magnolia biondii HOM05D007322 ORTHO05D009029 6.2e-126 455.7 662 68.1
TAR381G0036 Trochodendron aralioides HOM05D007322 ORTHO05D009029 1.5e-124 451.1 676 67.2
Aqoxy6G00206 Aquilegia oxysepala HOM05D007322 ORTHO05D009029 2.2e-123 447.2 653 67.5
Aa31LG1G3950 Aethionema arabicum HOM05D007322 ORTHO05D009029 1.1e-122 444.9 624 68.8
AL1G21890 Arabidopsis lyrata HOM05D007322 ORTHO05D009029 2.7e-121 440.3 538 77.3
Lalb_Chr20g0123451 Lupinus albus HOM05D007322 ORTHO05D009029 2.6e-116 423.7 573 70.7
HPP92_009152 Vanilla planifolia HOM05D007322 ORTHO05D009029 2.2e-115 420.6 589 65.0
EL10Ac6g14069 Beta vulgaris HOM05D007322 ORTHO05D009029 6.4e-115 419.1 627 66.8
Medtr2g007030 Medicago truncatula HOM05D007322 ORTHO05D009029 1.1e-114 418.3 585 66.2
Phvul.006G214900 Phaseolus vulgaris HOM05D007322 ORTHO05D009029 1.2e-113 414.8 544 75.0
Nn5g28260 Nelumbo nucifera HOM05D007322 ORTHO05D009029 6.0e-113 412.5 661 65.4
TPR.G2112 Trifolium pratense HOM05D007322 ORTHO05D009029 4.3e-111 406.4 585 69.9
Solyc11g040260.2 Solanum lycopersicum HOM05D007322 ORTHO05D009029 3.7e-110 403.3 584 70.9
Sopen11g018100 Solanum pennellii HOM05D007322 ORTHO05D009029 4.8e-110 402.9 584 70.9
ATR0026G013 Amborella trichopoda HOM05D007322 ORTHO05D009029 3.1e-109 400.2 621 66.8
Hund12986 Selenicereus undatus HOM05D007322 ORTHO05D009029 4.5e-108 396.4 612 46.9
VMungo0540G0689 Vigna mungo HOM05D007322 ORTHO05D009029 5.7e-103 379.4 546 72.2
Haze_01685 Corylus avellana HOM05D007322 ORTHO05D009029 1.4e-98 364.8 224 80.4
arahy.Tifrunner.gnm1.ann1.YY4I9I Arachis hypogaea HOM05D007322 ORTHO05D009029 4.2e-98 363.2 585 63.4
Ah.03g137110 Amaranthus hybridus HOM05D007322 ORTHO05D009029 2.7e-97 360.5 633 62.7
SGA_v2.0_scaffold110G31316 Striga asiatica HOM05D007322 ORTHO05D009029 1.8e-96 357.8 720 58.1
DCAR_025358 Daucus carota HOM05D007322 ORTHO05D009029 2.5e-95 354.0 228 75.4
arahy.Tifrunner.gnm1.ann1.BYDN2S Arachis hypogaea HOM05D007322 ORTHO05D009029 3.3e-95 353.6 585 63.1
ClCG10G013500 Citrullus lanatus HOM05D007322 ORTHO05D009029 2.0e-92 344.4 225 76.0
MSTRG.20302 Avicennia marina HOM05D007322 ORTHO05D009029 9.4e-90 335.5 667 60.1
FAN08G0261 Fragaria x ananassa HOM05D007322 ORTHO05D009029 1.6e-89 334.7 221 73.8
Eucgr.G00576 Eucalyptus grandis HOM05D007322 ORTHO05D009029 1.0e-83 315.5 228 68.4
Os01g0559500 Oryza sativa ssp. japonica HOM05D007322 ORTHO05D009029 3.8e-83 313.5 588 61.6
Nitab4.5_0000001g0160 Nicotiana tabacum HOM05D007322 ORTHO05D009029 8.0e-81 305.8 222 70.7
Zm00001eb162220 Zea mays HOM05D007322 ORTHO05D009029 2.6e-79 300.8 640 58.8
Nitab4.5_0003788g0020 Nicotiana tabacum HOM05D007322 ORTHO05D009029 5.7e-79 299.7 194 76.3
ECA234G4037 Erigeron canadensis HOM05D007322 ORTHO05D009029 5.3e-77 293.1 539 66.6
Sc06g0002720 Simmondsia chinensis HOM05D007322 ORTHO05D009029 2.2e-70 271.2 488 69.9
Peaxi162Scf00152g01437 Petunia axillaris HOM05D007322 ORTHO05D009029 8.5e-67 259.2 177 71.8
FAN04G1727 Fragaria x ananassa HOM05D001260 ORTHO05D002424 2.7e-65 254.2 256 62.5
Oeu008898.1 Olea europaea HOM05D007322 ORTHO05D009029 2.0e-60 238.0 265 60.0
Nitab4.5_0000001g0170 Nicotiana tabacum HOM05D007322 ORTHO05D009029 1.5e-58 231.9 252 61.9
CDE05G1655 Ceratophyllum demersum HOM05D007322 ORTHO05D009029 9.5e-58 229.2 222 51.4
Peaxi162Scf00152g01436 Petunia axillaris HOM05D007322 ORTHO05D009029 4.1e-45 187.2 287 50.5
DCAR_025359 Daucus carota HOM05D007322 ORTHO05D009029 4.3e-42 177.2 152 71.1
Cpa.g.sc113.59 Carica papaya HOM05D007322 ORTHO05D009029 2.9e-38 164.5 110 70.9
Nitab4.5_0003788g0010 Nicotiana tabacum HOM05D007322 ORTHO05D009029 3.7e-38 164.1 155 67.7
Haze_01695 Corylus avellana HOM05D004517 ORTHO05D005366 6.0e-36 156.8 124 66.1
Actinidia26149 Actinidia chinensis HOM05D007322 ORTHO05D009029 3.3e-34 151.0 126 77.8
Cpa.g.c42393 Carica papaya HOM05D007322 ORTHO05D009029 2.1e-25 121.7 97 60.8
Peaxi162Scf00427g00004 Petunia axillaris HOM05D007322 ORTHO05D009029 2.5e-18 98.2 51 86.3
PGSC0003DMG400008423 Solanum tuberosum HOM05D007322 ORTHO05D009029 6.2e-17 93.6 68 66.2
Pp3c24_4430 Physcomitrium patens HOM05D007322 ORTHO05D009029 3.4e-15 87.8 112 36.6
CDE07G1469 Ceratophyllum demersum HOM05D003056 ORTHO05D003422 8.7e-11 73.2 189 23.8
CDE05G3586 Ceratophyllum demersum HOM05D000602 ORTHO05D009029 1.1e-10 72.8 83 47.0
Nn8g40410 Nelumbo nucifera HOM05D003056 ORTHO05D003422 7.3e-10 70.1 177 24.3
Rhsim12G0158500 Rhododendron simsii HOM05D003056 ORTHO05D003422 2.1e-09 68.6 195 22.6
Cpa.g.c31488 Carica papaya HOM05D007322 ORTHO05D009029 2.8e-09 68.2 76 44.7
Rhsim12G0158600 Rhododendron simsii HOM05D003056 ORTHO05D003422 6.2e-09 67.0 186 22.6
DCAR_020128 Daucus carota HOM05D003056 ORTHO05D003422 1.1e-08 66.2 186 23.1
Ca_02033_v3 Cicer arietinum L. HOM05D003056 ORTHO05D003422 1.4e-08 65.9 182 22.5
Psat1g146880 Pisum sativum HOM05D003056 ORTHO05D003422 1.4e-08 65.9 186 23.1
PSO541G6324 Papaver somniferum HOM05D003056 ORTHO05D003422 1.8e-08 65.5 175 23.4
COL.COLO4_29977 Corchorus olitorius HOM05D003056 ORTHO05D003422 9.0e-08 63.2 177 22.6
PSO675G3831 Papaver somniferum HOM05D003056 ORTHO05D003422 9.0e-08 63.2 173 22.0
QL02p098354 Quercus lobata HOM05D003056 ORTHO05D003422 9.0e-08 63.2 186 22.6
CSS0047097 Camellia sinensis var. sinensis HOM05D006770 ORTHO05D008356 1.2e-07 62.8 179 27.9
Sopen07g006580 Solanum pennellii HOM05D003056 ORTHO05D003422 1.2e-07 62.8 186 24.2
COL.COLO4_28305 Corchorus olitorius HOM05D006106 ORTHO05D034875 1.5e-07 62.4 146 26.7
PGSC0003DMG400004093 Solanum tuberosum HOM05D003056 ORTHO05D003422 2.0e-07 62.0 186 23.7
Pp3c22_3230 Physcomitrium patens HOM05D003056 ORTHO05D003422 2.6e-07 61.6 127 26.0
Solyc07g017760.1 Solanum lycopersicum HOM05D003056 ORTHO05D003422 2.6e-07 61.6 186 24.2
EL10Ac8g18299 Beta vulgaris HOM05D003056 ORTHO05D003422 1.7e-06 58.9 182 22.0
Carub.0001s0691 Capsella rubella HOM05D006354 ORTHO05D007773 1.7e-06 58.9 189 22.2
Pp3c4_14490 Physcomitrium patens HOM05D005862 ORTHO05D000003 1.7e-06 58.9 167 24.0
Ca_01327_v3 Cicer arietinum L. HOM05D006354 ORTHO05D007773 2.2e-06 58.5 114 28.9
Eucgr.C02384 Eucalyptus grandis HOM05D003056 ORTHO05D003422 2.2e-06 58.5 186 23.1
Ah.06g184240 Amaranthus hybridus HOM05D006354 ORTHO05D007773 3.8e-06 57.8 204 22.5
Oeu027802.1 Olea europaea HOM05D007322 ORTHO05D009029 3.8e-06 57.8 81 37.0
ATR0827G002 Amborella trichopoda HOM05D006354 ORTHO05D007773 4.9e-06 57.4 189 23.3
MD13G1249100 Malus domestica HOM05D003056 ORTHO05D003422 6.4e-06 57.0 186 21.0
Cc11_g03820 Coffea canephora HOM05D006106 ORTHO05D015839 8.4e-06 56.6 120 26.7


User provided reference genes

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