Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0016595 Camellia sinensis var. sinensis HOM05D001184 ORTHO05D017717 3.3e-39 164.5 78 100.0
CSS0000282 Camellia sinensis var. sinensis HOM05D001184 ORTHO05D017717 2.7e-28 128.3 90 74.4
CSS0010950 Camellia sinensis var. sinensis HOM05D001184 ORTHO05D017717 2.7e-28 128.3 90 74.4
CSS0018170 Camellia sinensis var. sinensis HOM05D001184 ORTHO05D003397 1.3e-27 125.9 77 83.1
CSS0036533 Camellia sinensis var. sinensis HOM05D001184 ORTHO05D003397 1.3e-27 125.9 77 83.1
CSS0035920 Camellia sinensis var. sinensis HOM05D001184 ORTHO05D017717 3.8e-27 124.4 85 72.9
HanXRQChr15g0488241 Helianthus annuus HOM05D001184 ORTHO05D003397 8.8e-24 113.2 85 67.1
Oeu055765.1 Olea europaea HOM05D001184 ORTHO05D003397 2.6e-23 111.7 77 70.1
CDE06G0050 Ceratophyllum demersum HOM05D001184 ORTHO05D003397 5.7e-23 110.5 77 68.8
CDE08G1095 Ceratophyllum demersum HOM05D001184 ORTHO05D003397 5.7e-23 110.5 77 68.8
GSVIVG01020924001 Vitis vinifera HOM05D001184 ORTHO05D003397 5.7e-23 110.5 77 74.0
Duzib268G0787 Durio zibethinus HOM05D001184 ORTHO05D003397 9.8e-23 109.8 77 70.1
Gohir.A09G206100 Gossypium hirsutum HOM05D001184 ORTHO05D003397 9.8e-23 109.8 77 71.4
Gohir.D09G199700 Gossypium hirsutum HOM05D001184 ORTHO05D003397 9.8e-23 109.8 77 71.4
Gorai.006G223400 Gossypium raimondii HOM05D001184 ORTHO05D003397 9.8e-23 109.8 77 71.4
COL.COLO4_20192 Corchorus olitorius HOM05D001184 ORTHO05D003397 1.3e-22 109.4 77 70.1
Manes.15G055300 Manihot esculenta HOM05D001184 ORTHO05D003397 1.7e-22 109.0 77 68.8
Nitab4.5_0009377g0030 Nicotiana tabacum HOM05D001184 ORTHO05D003397 1.7e-22 109.0 77 67.5
Sopen07g004890 Solanum pennellii HOM05D001184 ORTHO05D003397 1.7e-22 109.0 77 68.8
PGSC0003DMG400028753 Solanum tuberosum HOM05D001184 ORTHO05D003397 1.7e-22 109.0 77 68.8
Nitab4.5_0000366g0090 Nicotiana tabacum HOM05D001184 ORTHO05D003397 2.2e-22 108.6 77 68.8
vmacro11026 Vaccinium macrocarpon HOM05D001184 ORTHO05D003397 2.2e-22 108.6 77 68.8
Peaxi162Scf00324g00227 Petunia axillaris HOM05D001184 ORTHO05D003397 2.8e-22 108.2 77 68.8
unitig_32.g10864 Utricularia gibba HOM05D001184 ORTHO05D003397 2.8e-22 108.2 75 70.7
SalBow8G1842 Salvia bowleyana HOM05D001184 ORTHO05D003397 3.7e-22 107.8 77 68.8
SalBow8G3376 Salvia bowleyana HOM05D001184 ORTHO05D003397 3.7e-22 107.8 77 68.8
Thecc.04G199200 Theobroma cacao HOM05D001184 ORTHO05D003397 3.7e-22 107.8 77 70.1
MSTRG.4233 Avicennia marina HOM05D001184 ORTHO05D003397 4.9e-22 107.5 77 68.8
Peaxi162Scf00423g00134 Petunia axillaris HOM05D001184 ORTHO05D003397 4.9e-22 107.5 77 70.1
TAR362G0810 Trochodendron aralioides HOM05D001184 ORTHO05D003397 4.9e-22 107.5 75 69.3
Haze_03548 Corylus avellana HOM05D001184 ORTHO05D003397 6.3e-22 107.1 77 70.1
Nitab4.5_0002889g0080 Nicotiana tabacum HOM05D001184 ORTHO05D003397 6.3e-22 107.1 75 68.0
CiPaw.02G065500 Carya illinoinensis HOM05D001184 ORTHO05D003397 8.3e-22 106.7 77 68.8
ECA247G2182 Erigeron canadensis HOM05D001184 ORTHO05D003397 8.3e-22 106.7 77 67.5
Migut.O00219 Erythranthe guttata HOM05D001184 ORTHO05D003397 8.3e-22 106.7 77 70.1
Hma1.2p1_0187F.1_g082410 Hydrangea macrophylla HOM05D001184 ORTHO05D003397 8.3e-22 106.7 77 70.1
Actinidia29359 Actinidia chinensis HOM05D001184 ORTHO05D003397 1.1e-21 106.3 77 68.8
SGA_v2.0_scaffold299G47730 Striga asiatica HOM05D001184 ORTHO05D003397 1.1e-21 106.3 77 68.8
Ciclev10004343m.g Citrus clementina HOM05D001184 ORTHO05D003397 1.4e-21 105.9 77 67.5
Nitab4.5_0002365g0060 Nicotiana tabacum HOM05D001184 ORTHO05D003397 1.4e-21 105.9 76 67.1
CANSAT78G2277 Cannabis sativa HOM05D001184 ORTHO05D003397 1.8e-21 105.5 77 67.5
DCAR_026633 Daucus carota HOM05D001184 ORTHO05D003397 1.8e-21 105.5 77 66.2
Duzib212G0797 Durio zibethinus HOM05D001184 ORTHO05D003397 1.8e-21 105.5 75 68.0
Rhsim02G0172200 Rhododendron simsii HOM05D001184 ORTHO05D003397 1.8e-21 105.5 77 66.2
Thhalv10024450m.g Eutrema salsugineum HOM05D001184 ORTHO05D003397 2.4e-21 105.1 77 67.5
Nitab4.5_0002204g0040 Nicotiana tabacum HOM05D001184 ORTHO05D017717 2.4e-21 105.1 77 67.5
Sabra16G0200900 Salix brachista HOM05D001184 ORTHO05D003397 2.4e-21 105.1 77 67.5
AL7G42740 Arabidopsis lyrata HOM05D001184 ORTHO05D003397 3.1e-21 104.8 77 67.5
Eucgr.H00043 Eucalyptus grandis HOM05D001184 ORTHO05D003397 3.1e-21 104.8 86 61.6
TAR633G0494 Trochodendron aralioides HOM05D001184 ORTHO05D003397 3.1e-21 104.8 76 68.4
Potri.001G317500 Populus trichocarpa HOM05D001184 ORTHO05D003397 4.1e-21 104.4 77 66.2
arahy.Tifrunner.gnm1.ann1.28RW3P Arachis hypogaea HOM05D001184 ORTHO05D003397 5.4e-21 104.0 77 67.5
C08p07710 Brassica napus HOM05D001184 ORTHO05D003397 5.4e-21 104.0 77 67.5
BolC8t47619H Brassica oleracea HOM05D001184 ORTHO05D003397 5.4e-21 104.0 77 67.5
CAN.G305.8 Capsicum annuum HOM05D001184 ORTHO05D003397 5.4e-21 104.0 77 66.2
CARHR219660 Cardamine hirsuta HOM05D001184 ORTHO05D003397 5.4e-21 104.0 77 66.2
Lsat_1_v5_gn_2_46341 Lactuca sativa HOM05D001184 ORTHO05D003397 5.4e-21 104.0 77 66.2
MD04G1013400 Malus domestica HOM05D001184 ORTHO05D003397 5.4e-21 104.0 77 66.2
GSVIVG01038361001 Vitis vinifera HOM05D001184 ORTHO05D003397 5.4e-21 104.0 75 69.3
Aa31LG9G3730 Aethionema arabicum HOM05D001184 ORTHO05D003397 7.0e-21 103.6 77 66.2
Carub.0007s2868 Capsella rubella HOM05D001184 ORTHO05D003397 1.2e-20 102.8 77 67.5
Ca_04924_v3 Cicer arietinum L. HOM05D001184 ORTHO05D003397 1.2e-20 102.8 77 67.5
Glyma.12G018400 Glycine max HOM05D001184 ORTHO05D003397 1.2e-20 102.8 77 66.2
AT4G13780 Arabidopsis thaliana HOM05D001184 ORTHO05D003397 1.6e-20 102.4 77 66.2
BraA08t32681Z Brassica rapa HOM05D001184 ORTHO05D003397 1.6e-20 102.4 77 66.2
Lj3g0023242 Lotus japonicus HOM05D001184 ORTHO05D003397 1.6e-20 102.4 77 66.2
MBI03_g42549_MAGBIO Magnolia biondii HOM05D001184 ORTHO05D003397 1.6e-20 102.4 76 65.8
Atru.chr13.1877 Acer truncatum HOM05D001184 ORTHO05D003397 2.0e-20 102.1 77 63.6
ClCG06G008040 Citrullus lanatus HOM05D001184 ORTHO05D003397 2.0e-20 102.1 77 66.2
Lalb_Chr19g0139901 Lupinus albus HOM05D001184 ORTHO05D003397 2.0e-20 102.1 77 66.2
PSO339G1617 Papaver somniferum HOM05D001184 ORTHO05D003397 2.0e-20 102.1 77 67.5
Phvul.011G020800 Phaseolus vulgaris HOM05D001184 ORTHO05D003397 2.0e-20 102.1 77 66.2
Sp7g11570 Schrenkiella parvula HOM05D001184 ORTHO05D003397 2.0e-20 102.1 77 66.2
SGA_v2.0_scaffold163G38069 Striga asiatica HOM05D001184 ORTHO05D003397 2.0e-20 102.1 77 66.2
arahy.Tifrunner.gnm1.ann1.P6K76F Arachis hypogaea HOM05D001184 ORTHO05D003397 2.7e-20 101.7 75 66.7
A08p06650 Brassica napus HOM05D001184 ORTHO05D003397 2.7e-20 101.7 77 67.5
MD04G1013000 Malus domestica HOM05D001184 ORTHO05D017717 2.7e-20 101.7 77 64.9
PSO384G1210 Papaver somniferum HOM05D001184 ORTHO05D003397 2.7e-20 101.7 77 67.5
QL10p065779 Quercus lobata HOM05D001184 ORTHO05D003397 2.7e-20 101.7 76 65.8
Sed0003636 Sechium edule HOM05D001184 ORTHO05D003397 2.7e-20 101.7 77 66.2
TWI18G0923 Tripterygium wilfordii HOM05D001184 ORTHO05D003397 2.7e-20 101.7 77 66.2
Psat4g022000 Pisum sativum HOM05D001184 ORTHO05D003397 3.5e-20 101.3 77 64.9
DCAR_023870 Daucus carota HOM05D001184 ORTHO05D003397 4.5e-20 100.9 77 62.3
Lalb_Chr01g0000971 Lupinus albus HOM05D001184 ORTHO05D003397 4.5e-20 100.9 77 64.9
Nn1g07935 Nelumbo nucifera HOM05D001184 ORTHO05D003397 4.5e-20 100.9 77 64.9
Nn3g19994 Nelumbo nucifera HOM05D001184 ORTHO05D003397 4.5e-20 100.9 77 63.6
Potri.017G057700 Populus trichocarpa HOM05D001184 ORTHO05D003397 4.5e-20 100.9 77 66.2
Atru.chr4.1616 Acer truncatum HOM05D001184 ORTHO05D003397 5.9e-20 100.5 77 63.6
Prupe.2G130800 Prunus persica HOM05D001184 ORTHO05D003397 5.9e-20 100.5 77 63.6
RcHm_v2.0_Chr4g0414311 Rosa chinensis HOM05D001184 ORTHO05D003397 5.9e-20 100.5 77 63.6
TWI12G1242 Tripterygium wilfordii HOM05D001184 ORTHO05D003397 5.9e-20 100.5 77 66.2
TPR.G34293 Trifolium pratense HOM05D001184 ORTHO05D003397 7.7e-20 100.1 77 64.9
EL10Ac3g07475 Beta vulgaris HOM05D001184 ORTHO05D003397 1.0e-19 99.8 77 67.5
Cpa.g.sc83.20 Carica papaya HOM05D001184 ORTHO05D003397 1.0e-19 99.8 77 64.9
Medtr4g077700 Medicago truncatula HOM05D001184 ORTHO05D003397 1.0e-19 99.8 77 63.6
Prupe.1G159500 Prunus persica HOM05D001184 ORTHO05D003397 1.0e-19 99.8 77 63.6
Sabra17G0050800 Salix brachista HOM05D001184 ORTHO05D003397 1.0e-19 99.8 77 66.2
AUR62020841 Chenopodium quinoa HOM05D001184 ORTHO05D003397 1.3e-19 99.4 77 67.5
QL10p064653 Quercus lobata HOM05D001184 ORTHO05D003397 1.3e-19 99.4 76 64.5
Aa31LG9G3770 Aethionema arabicum HOM05D001184 ORTHO05D007940 1.7e-19 99.0 77 64.9
Aa31LG4G12540 Aethionema arabicum HOM05D001184 ORTHO05D003397 2.3e-19 98.6 77 63.6
Aqoxy5G03290 Aquilegia oxysepala HOM05D001184 ORTHO05D003397 2.3e-19 98.6 75 65.3
AUR62018575 Chenopodium quinoa HOM05D001184 ORTHO05D003397 2.3e-19 98.6 77 67.5
VMungo1127G0354 Vigna mungo HOM05D001184 ORTHO05D003397 2.3e-19 98.6 77 63.6
MELO3C020358.2 Cucumis melo HOM05D001184 ORTHO05D003397 6.6e-19 97.1 77 63.6
MBI06_g27434_MAGBIO Magnolia biondii HOM05D001184 ORTHO05D003397 6.6e-19 97.1 77 62.3
Os06g0508700 Oryza sativa ssp. japonica HOM05D001184 ORTHO05D017717 6.6e-19 97.1 77 61.0
BcaB02g08652 Brassica carinata HOM05D001184 ORTHO05D003397 8.6e-19 96.7 77 63.6
Sed0027305 Sechium edule HOM05D001184 ORTHO05D003397 8.6e-19 96.7 77 63.6
BcaC02g09391 Brassica carinata HOM05D001184 ORTHO05D003397 1.1e-18 96.3 77 62.3
A04p08440 Brassica napus HOM05D001184 ORTHO05D003397 1.1e-18 96.3 77 62.3
C04p42150 Brassica napus HOM05D001184 ORTHO05D003397 1.1e-18 96.3 77 62.3
BolC4t25796H Brassica oleracea HOM05D001184 ORTHO05D003397 1.1e-18 96.3 77 62.3
BraA04t16533Z Brassica rapa HOM05D001184 ORTHO05D003397 1.1e-18 96.3 77 62.3
FAN12G0346 Fragaria x ananassa HOM05D001184 ORTHO05D003397 1.1e-18 96.3 77 61.0
FAN17G0017 Fragaria x ananassa HOM05D001184 ORTHO05D003397 1.1e-18 96.3 77 61.0
FAN22G0763 Fragaria x ananassa HOM05D001184 ORTHO05D003397 1.1e-18 96.3 77 61.0
Hund18999 Selenicereus undatus HOM05D001184 ORTHO05D003397 1.1e-18 96.3 77 64.9
CsaV3_2G011140 Cucumis sativus L. HOM05D001184 ORTHO05D003397 1.5e-18 95.9 77 64.9
THA.LOC104808703 Tarenaya hassleriana HOM05D001184 ORTHO05D003397 1.5e-18 95.9 77 64.9
Ah.13g078060 Amaranthus hybridus HOM05D001184 ORTHO05D003397 1.9e-18 95.5 77 62.3
FAN07G0119 Fragaria x ananassa HOM05D001184 ORTHO05D003397 2.5e-18 95.1 77 59.7
AL2G17960 Arabidopsis lyrata HOM05D001184 ORTHO05D003397 3.3e-18 94.7 77 62.3
Zm00001eb008700 Zea mays HOM05D001184 ORTHO05D003397 3.3e-18 94.7 77 59.7
FvH4_4g13560 Fragaria vesca HOM05D001184 ORTHO05D003397 4.2e-18 94.4 77 59.7
HPP92_023535 Vanilla planifolia HOM05D001184 ORTHO05D003397 4.2e-18 94.4 75 61.3
ATR0987G002 Amborella trichopoda HOM05D001184 ORTHO05D003397 5.5e-18 94.0 77 62.3
Psat7g171920 Pisum sativum HOM05D001184 ORTHO05D003397 5.5e-18 94.0 75 61.3
SEGI_18693 Sequoiadendron giganteum HOM05D001184 ORTHO05D003397 5.5e-18 94.0 77 62.3
Cc03_g08090 Coffea canephora HOM05D001184 ORTHO05D003397 7.2e-18 93.6 77 58.4
Medtr4g122580 Medicago truncatula HOM05D001184 ORTHO05D003397 7.2e-18 93.6 77 62.3
CARHR054020 Cardamine hirsuta HOM05D001184 ORTHO05D003397 9.5e-18 93.2 75 62.7
PGR142G4368 Punica granatum HOM05D001184 ORTHO05D003397 9.5e-18 93.2 77 58.4
PSO339G2903 Papaver somniferum HOM05D001184 ORTHO05D003397 1.6e-17 92.4 73 64.4
Zm00001eb400100 Zea mays HOM05D001184 ORTHO05D003397 2.1e-17 92.0 77 55.8
Pp3c13_2300 Physcomitrium patens HOM05D001184 ORTHO05D003397 3.6e-17 91.3 77 58.4
SHI11900 Sapria himalayana HOM05D001184 ORTHO05D003397 8.0e-17 90.1 75 58.7
BcaC07g37333 Brassica carinata HOM05D001184 ORTHO05D003397 1.4e-16 89.4 66 65.2
Mapoly0045s0011 Marchantia polymorpha HOM05D001184 ORTHO05D003397 4.0e-16 87.8 77 55.8
HPP92_020335 Vanilla planifolia HOM05D001184 ORTHO05D003397 6.8e-16 87.0 77 58.4
VMungo1309G2214 Vigna mungo HOM05D001184 ORTHO05D017717 6.8e-16 87.0 69 62.3
AagrBONN_evm.TU.Sc2ySwM_344.2232 Anthoceros agrestis HOM05D001184 ORTHO05D003397 2.6e-15 85.1 77 55.8
THA.LOC104804806 Tarenaya hassleriana HOM05D001184 ORTHO05D003397 2.6e-15 85.1 77 59.7
Pp3c3_5590 Physcomitrium patens HOM05D001184 ORTHO05D003397 4.4e-15 84.3 76 56.6
Zm00001eb189910 Zea mays HOM05D001184 ORTHO05D003397 5.7e-15 84.0 77 54.5
AagrBONN_evm.TU.Sc2ySwM_228.3561 Anthoceros agrestis HOM05D001184 ORTHO05D003397 9.8e-15 83.2 77 54.5
CBR_g55333 Chara braunii HOM05D001184 ORTHO05D003397 4.9e-14 80.9 78 51.3
SMO364G0158 Selaginella moellendorffii HOM05D001184 ORTHO05D003397 4.9e-14 80.9 75 49.3
Lj7C738G14 Lonicera japonica HOM05D000109 ORTHO05D000210 2.3e-11 72.0 62 58.1
Cre02.g087950 Chlamydomonas reinhardtii HOM05D001184 ORTHO05D003397 8.0e-09 63.5 77 45.5
AagrBONN_evm.TU.Sc2ySwM_344.629 Anthoceros agrestis HOM05D001184 ORTHO05D008450 2.6e-07 58.5 86 38.4
Os01g0821800 Oryza sativa ssp. japonica HOM05D001184 ORTHO05D008450 3.4e-07 58.2 77 41.6
Psat7g142560 Pisum sativum HOM05D001184 ORTHO05D003397 3.4e-07 58.2 55 52.7
Psat7g142400 Pisum sativum HOM05D001184 ORTHO05D003397 7.5e-07 57.0 55 50.9
HPP92_015593 Vanilla planifolia HOM05D001184 ORTHO05D008450 2.9e-06 55.1 77 42.9
Zm00001eb368820 Zea mays HOM05D001184 ORTHO05D008450 2.9e-06 55.1 77 39.0
PRCOL_00006676 Prasinoderma coloniale HOM05D001184 ORTHO05D008450 4.9e-06 54.3 75 41.3
Mapoly0179s0014 Marchantia polymorpha HOM05D001184 ORTHO05D008450 6.4e-06 53.9 76 39.5
PRCOL_00004649 Prasinoderma coloniale HOM05D001184 ORTHO05D003397 6.4e-06 53.9 86 37.2
EL10Ac2g02652 Beta vulgaris HOM05D001184 ORTHO05D008450 8.3e-06 53.5 86 39.5


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