Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0016095 Camellia sinensis var. sinensis HOM05D000894 ORTHO05D002325 3.5e-115 418.3 215 100.0
CSS0020420 Camellia sinensis var. sinensis HOM05D000894 ORTHO05D002325 4.5e-70 268.5 145 97.2
CSS0030543 Camellia sinensis var. sinensis HOM05D000894 ORTHO05D002325 6.0e-46 188.3 140 73.6
Rhsim06G0009500 Rhododendron simsii HOM05D000894 ORTHO05D002325 5.6e-44 181.8 150 71.3
Dinv39574 Davidia involucrata HOM05D000894 ORTHO05D002325 8.1e-43 177.9 144 70.8
Actinidia15476 Actinidia chinensis HOM05D000894 ORTHO05D002325 3.1e-42 176.0 144 69.4
CSS0044890 Camellia sinensis var. sinensis HOM05D000894 ORTHO05D002325 5.2e-42 175.3 140 70.0
Dinv31914 Davidia involucrata HOM05D000894 ORTHO05D002325 1.7e-40 170.2 145 67.6
Hma1.2p1_1260F.1_g271030 Hydrangea macrophylla HOM05D000894 ORTHO05D002325 2.1e-35 153.3 143 62.2
TAR381G0735 Trochodendron aralioides HOM05D000894 ORTHO05D002325 2.8e-35 152.9 147 59.9
Cfa014035 Carpinus fangiana HOM05D000894 ORTHO05D002325 1.6e-30 137.1 146 56.2
TAR625G0558 Trochodendron aralioides HOM05D000894 ORTHO05D002325 2.1e-30 136.7 146 54.1
Haze_22740 Corylus avellana HOM05D000894 ORTHO05D002325 7.8e-30 134.8 139 55.4
vmacro21837 Vaccinium macrocarpon HOM05D000894 ORTHO05D002325 3.9e-29 132.5 167 54.5
QL02p013593 Quercus lobata HOM05D000894 ORTHO05D002325 1.1e-26 124.4 147 54.4
Nn5g30896 Nelumbo nucifera HOM05D000894 ORTHO05D002325 1.8e-26 123.6 146 53.4
Lj4C803T7 Lonicera japonica HOM05D000894 ORTHO05D002325 4.0e-26 122.5 144 53.5
Cc10_g00880 Coffea canephora HOM05D000894 ORTHO05D002325 3.4e-25 119.4 129 52.7
MD08G1004700 Malus domestica HOM05D000894 ORTHO05D002325 7.6e-25 118.2 153 49.0
Atru.chr13.174 Acer truncatum HOM05D000894 ORTHO05D002325 3.8e-24 115.9 146 54.8
Eucgr.F01713 Eucalyptus grandis HOM05D000894 ORTHO05D002325 6.4e-24 115.2 141 52.5
Prupe.1G356800 Prunus persica HOM05D000894 ORTHO05D002325 6.4e-24 115.2 153 48.4
Migut.N03195 Erythranthe guttata HOM05D000894 ORTHO05D002325 2.4e-23 113.2 158 49.4
Potri.005G247900 Populus trichocarpa HOM05D000894 ORTHO05D002325 2.4e-23 113.2 141 50.4
Oeu025003.4 Olea europaea HOM05D000894 ORTHO05D002325 4.2e-23 112.5 140 49.3
RcHm_v2.0_Chr6g0303971 Rosa chinensis HOM05D000894 ORTHO05D002325 4.2e-23 112.5 151 48.3
MD15G1004200 Malus domestica HOM05D000894 ORTHO05D002325 3.5e-22 109.4 147 49.0
Thecc.08G055200 Theobroma cacao HOM05D000894 ORTHO05D002325 3.5e-22 109.4 135 53.3
Aqoxy3G00355 Aquilegia oxysepala HOM05D000894 ORTHO05D002325 4.6e-22 109.0 145 51.7
Lj5g0012630 Lotus japonicus HOM05D000894 ORTHO05D002325 1.7e-21 107.1 138 50.7
AUR62013832 Chenopodium quinoa HOM05D000894 ORTHO05D002325 3.0e-21 106.3 143 49.7
Glyma.14G223100 Glycine max HOM05D000894 ORTHO05D002325 3.9e-21 105.9 136 50.7
MSTRG.1129 Avicennia marina HOM05D000894 ORTHO05D002325 6.6e-21 105.1 146 45.9
AUR62036772 Chenopodium quinoa HOM05D000894 ORTHO05D002325 6.6e-21 105.1 143 49.0
Oeu046333.2 Olea europaea HOM05D000894 ORTHO05D002325 8.7e-21 104.8 146 49.3
Potri.002G013500 Populus trichocarpa HOM05D000894 ORTHO05D002325 8.7e-21 104.8 139 47.5
Sabra05G0191600 Salix brachista HOM05D000894 ORTHO05D002325 1.5e-20 104.0 141 46.8
Glyma.17G261600 Glycine max HOM05D000894 ORTHO05D002325 1.9e-20 103.6 136 50.0
PGR083G1464 Punica granatum HOM05D000894 ORTHO05D002325 1.9e-20 103.6 152 46.7
Ah.11g040680 Amaranthus hybridus HOM05D000894 ORTHO05D002325 3.3e-20 102.8 136 47.8
Ciclev10000172m.g Citrus clementina HOM05D000894 ORTHO05D002325 1.6e-19 100.5 139 49.6
TWI56G0050 Tripterygium wilfordii HOM05D000894 ORTHO05D002325 3.6e-19 99.4 162 43.8
CiPaw.07G141400 Carya illinoinensis HOM05D000894 ORTHO05D002325 4.8e-19 99.0 134 52.2
Sc02g0008970 Simmondsia chinensis HOM05D000894 ORTHO05D002325 6.2e-19 98.6 137 43.8
Nitab4.5_0000588g0330 Nicotiana tabacum HOM05D000894 ORTHO05D002325 8.1e-19 98.2 140 43.6
Phvul.001G001400 Phaseolus vulgaris HOM05D000894 ORTHO05D002325 1.8e-18 97.1 139 47.5
arahy.Tifrunner.gnm1.ann1.U1RN9D Arachis hypogaea HOM05D000894 ORTHO05D002325 2.4e-18 96.7 146 45.9
Duzib093G2095 Durio zibethinus HOM05D000894 ORTHO05D002325 2.4e-18 96.7 140 47.9
Gohir.A05G254900 Gossypium hirsutum HOM05D000894 ORTHO05D002325 2.4e-18 96.7 143 48.3
Gorai.009G268000 Gossypium raimondii HOM05D000894 ORTHO05D002325 2.4e-18 96.7 143 49.0
AT5G42220 Arabidopsis thaliana HOM05D000894 ORTHO05D002325 3.1e-18 96.3 154 45.5
arahy.Tifrunner.gnm1.ann1.LYL18I Arachis hypogaea HOM05D000894 ORTHO05D002325 4.0e-18 95.9 146 45.2
arahy.Tifrunner.gnm1.ann1.W1R3NJ Arachis hypogaea HOM05D000894 ORTHO05D002325 4.0e-18 95.9 146 45.2
Thhalv10003631m.g Eutrema salsugineum HOM05D000894 ORTHO05D002325 9.0e-18 94.7 131 48.1
Gohir.A05G181200 Gossypium hirsutum HOM05D000894 ORTHO05D002325 9.0e-18 94.7 142 43.0
Gohir.D05G256500 Gossypium hirsutum HOM05D000894 ORTHO05D002325 9.0e-18 94.7 142 47.9
AL8G19490 Arabidopsis lyrata HOM05D000894 ORTHO05D002325 2.0e-17 93.6 131 48.9
CAN.G311.95 Capsicum annuum HOM05D000894 ORTHO05D002325 2.0e-17 93.6 141 44.7
PSO675G7487 Papaver somniferum HOM05D000894 ORTHO05D002325 2.0e-17 93.6 127 52.8
CDE02G0614 Ceratophyllum demersum HOM05D000894 ORTHO05D002325 2.6e-17 93.2 130 46.2
PSO541G1981 Papaver somniferum HOM05D000894 ORTHO05D002325 2.6e-17 93.2 127 52.8
CARHR184490 Cardamine hirsuta HOM05D000894 ORTHO05D002325 3.4e-17 92.8 130 47.7
COL.COLO4_21614 Corchorus olitorius HOM05D000894 ORTHO05D002325 3.4e-17 92.8 144 45.8
CsaV3_4G037100 Cucumis sativus L. HOM05D000894 ORTHO05D002325 4.5e-17 92.4 127 48.0
Aa31LG9G12370 Aethionema arabicum HOM05D000894 ORTHO05D002325 7.6e-17 91.7 128 45.3
MBI08_g26493_MAGBIO Magnolia biondii HOM05D000894 ORTHO05D002325 7.6e-17 91.7 151 41.7
Peaxi162Scf00174g00159 Petunia axillaris HOM05D000894 ORTHO05D002325 7.6e-17 91.7 146 41.8
Gohir.D05G184200 Gossypium hirsutum HOM05D000894 ORTHO05D002325 9.9e-17 91.3 140 43.6
Lalb_Chr01g0008391 Lupinus albus HOM05D000894 ORTHO05D002325 9.9e-17 91.3 139 43.9
FvH4_2g37770 Fragaria vesca HOM05D000894 ORTHO05D002325 1.7e-16 90.5 135 45.9
FAN27G2060 Fragaria x ananassa HOM05D002849 ORTHO05D007186 1.7e-16 90.5 135 45.9
Gorai.009G189700 Gossypium raimondii HOM05D000894 ORTHO05D002325 1.7e-16 90.5 140 42.9
Duzib041G0349 Durio zibethinus HOM05D000894 ORTHO05D002325 2.9e-16 89.7 130 47.7
CANSAT25G1636 Cannabis sativa HOM05D000894 ORTHO05D002325 3.8e-16 89.4 135 46.7
Sabra02G0010500 Salix brachista HOM05D000894 ORTHO05D002325 3.8e-16 89.4 139 44.6
Solyc04g082160.4 Solanum lycopersicum HOM05D000894 ORTHO05D002325 3.8e-16 89.4 141 43.3
CANSAT25G2538 Cannabis sativa HOM05D000894 ORTHO05D002325 4.9e-16 89.0 137 47.4
Sopen04g035790 Solanum pennellii HOM05D000894 ORTHO05D002325 4.9e-16 89.0 141 42.6
Psat6g000200 Pisum sativum HOM05D000894 ORTHO05D002325 8.4e-16 88.2 141 44.0
ClCG05G015220 Citrullus lanatus HOM05D000894 ORTHO05D002325 1.4e-15 87.4 127 48.8
DCAR_013900 Daucus carota HOM05D000894 ORTHO05D002325 1.4e-15 87.4 125 49.6
FAN20G1564 Fragaria x ananassa HOM05D002849 ORTHO05D007186 1.9e-15 87.0 153 44.4
Cpa.g.sc26.232 Carica papaya HOM05D000894 ORTHO05D002325 3.2e-15 86.3 133 46.6
unitig_32.g11246 Utricularia gibba HOM05D000894 ORTHO05D002325 3.2e-15 86.3 147 38.8
PGSC0003DMG400009894 Solanum tuberosum HOM05D000894 ORTHO05D002325 5.4e-15 85.5 143 44.1
TPR.G26410 Trifolium pratense HOM05D000894 ORTHO05D002325 5.4e-15 85.5 141 41.1
BcaB07g31087 Brassica carinata HOM05D000894 ORTHO05D002325 1.6e-14 84.0 131 45.8
Ca_13492_v3 Cicer arietinum L. HOM05D000894 ORTHO05D002325 2.7e-14 83.2 144 43.1
Medtr1g026290 Medicago truncatula HOM05D000894 ORTHO05D002325 3.5e-14 82.8 142 43.0
Carub.0008s0704 Capsella rubella HOM05D000894 ORTHO05D002325 4.6e-14 82.4 123 43.9
EL10Ac1g02026 Beta vulgaris HOM05D000894 ORTHO05D002325 1.0e-13 81.3 115 46.1
Lalb_Chr03g0033601 Lupinus albus HOM05D000894 ORTHO05D002325 5.1e-13 79.0 147 40.8
MELO3C017008.2 Cucumis melo HOM05D000894 ORTHO05D002325 8.7e-13 78.2 127 44.1
SGA_v2.0_scaffold19G08600 Striga asiatica HOM05D000894 ORTHO05D002325 1.9e-12 77.0 153 40.5
Manes.05G140700 Manihot esculenta HOM05D000894 ORTHO05D002325 3.3e-12 76.3 157 38.9
BcaC04g22008 Brassica carinata HOM05D000894 ORTHO05D002325 7.4e-12 75.1 132 42.4
A09p19540 Brassica napus HOM05D000894 ORTHO05D002325 7.4e-12 75.1 132 42.4
C09p24910 Brassica napus HOM05D000894 ORTHO05D002325 7.4e-12 75.1 132 42.4
BolC9t55382H Brassica oleracea HOM05D000894 ORTHO05D002325 7.4e-12 75.1 132 42.4
BraA09t37568Z Brassica rapa HOM05D000894 ORTHO05D002325 7.4e-12 75.1 132 42.4
Lalb_Chr19g0131691 Lupinus albus HOM05D000894 ORTHO05D002325 7.4e-12 75.1 136 41.2
Sed0000145 Sechium edule HOM05D000894 ORTHO05D002325 7.4e-12 75.1 151 39.7
Sed0000541 Sechium edule HOM05D000894 ORTHO05D002325 2.8e-11 73.2 140 40.7
GSVIVG01029432001 Vitis vinifera HOM05D000894 ORTHO05D002325 2.8e-11 73.2 86 53.5
Sp7g08390 Schrenkiella parvula HOM05D000894 ORTHO05D002325 1.4e-10 70.9 179 34.1
Hund05131 Selenicereus undatus HOM05D000894 ORTHO05D002325 4.0e-10 69.3 126 42.9
ECA246G4835 Erigeron canadensis HOM05D000894 ORTHO05D002325 2.6e-09 66.6 133 37.6
HanXRQChr17g0533381 Helianthus annuus HOM05D000894 ORTHO05D002325 3.4e-09 66.2 145 35.2
ECA233G1071 Erigeron canadensis HOM05D000894 ORTHO05D002325 1.4e-07 60.8 138 33.3
HPP92_026892 Vanilla planifolia HOM05D000894 ORTHO05D002325 3.2e-07 59.7 123 34.1
SGA_v2.0_scaffold25G11192 Striga asiatica HOM05D000894 ORTHO05D002325 1.2e-06 57.8 126 37.3
ATR0661G248 Amborella trichopoda HOM05D000894 ORTHO05D002325 2.7e-06 56.6 126 36.5
Lsat_1_v5_gn_3_7681 Lactuca sativa HOM05D000894 ORTHO05D002325 6.0e-06 55.5 43 58.1


User provided reference genes

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