Gene: Solyc04g082160.4

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc04g082160.4
  • Transcript Identifier Solyc04g082160.4.1
  • Gene Type Coding gene
  • Location SL4.0ch04 : 63907662-63916019 : positive

Gene Family Information

  • ID HOM05D000894
  • #Genes/#Species 670/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc04g082160.4.1
  • uniprot A0A3Q7H3T8
  • gene_id Solyc04g082160

Descriptions

  • Description Ubiquitin (AHRD V3.3 *** A0A2U1QEA1_ARTAN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030433
IBA
GOA Databaseubiquitin-dependent ERAD pathway
GO:0006412
ISO
PLAZA Homology (enrichment)translation HOM05D000894

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0051787
IBA
GOA Databasemisfolded protein binding
GO:0031593
IBA
GOA Databasepolyubiquitin modification-dependent protein binding
GO:0003735
ISO
PLAZA Homology (enrichment)structural constituent of ribosome HOM05D000894

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0071818
IBA
GOA DatabaseBAT3 complex
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT5G42220
GO:0005840
ISO
PLAZA Homology (enrichment)ribosome HOM05D000894

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR019956 Ubiquitin domain
IPR000626 Ubiquitin-like domain
IPR029071 Ubiquitin-like domain superfamily
Mapman id Description
35.1 not assigned.annotated