Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0014733 Camellia sinensis var. sinensis HOM05D004093 ORTHO05D004981 7.2e-56 220.3 109 100.0
CSS0001341 Camellia sinensis var. sinensis HOM05D004093 ORTHO05D004981 2.5e-32 142.1 91 82.4
CiPaw.05G021800 Carya illinoinensis HOM05D004093 ORTHO05D004981 3.6e-31 138.3 91 79.1
Potri.001G289001 Populus trichocarpa HOM05D004093 ORTHO05D004981 3.6e-31 138.3 91 79.1
Haze_10324 Corylus avellana HOM05D004093 ORTHO05D004981 4.7e-31 137.9 91 79.1
CiPaw.06G163100 Carya illinoinensis HOM05D004093 ORTHO05D004981 8.0e-31 137.1 92 78.3
Cfa004713 Carpinus fangiana HOM05D004093 ORTHO05D004981 1.0e-30 136.7 91 78.0
GSVIVG01037036001 Vitis vinifera HOM05D004093 ORTHO05D004981 1.0e-30 136.7 91 78.0
Dinv16064 Davidia involucrata HOM05D004093 ORTHO05D004981 1.4e-30 136.3 106 70.8
Manes.07G052300 Manihot esculenta HOM05D004093 ORTHO05D004981 2.3e-30 135.6 91 79.1
Rhsim11G0149600 Rhododendron simsii HOM05D004093 ORTHO05D004981 2.3e-30 135.6 89 78.7
VMungo0251G2341 Vigna mungo HOM05D004093 ORTHO05D004981 3.0e-30 135.2 89 78.7
Phvul.011G054700 Phaseolus vulgaris HOM05D004093 ORTHO05D004981 4.0e-30 134.8 89 77.5
MELO3C018029.2 Cucumis melo HOM05D004093 ORTHO05D004981 5.2e-30 134.4 91 76.9
Sabra16G0180800 Salix brachista HOM05D004093 ORTHO05D004981 5.2e-30 134.4 91 76.9
CsaV3_4G000020 Cucumis sativus L. HOM05D004093 ORTHO05D004981 6.8e-30 134.0 91 76.9
Medtr4g120810 Medicago truncatula HOM05D004093 ORTHO05D004981 6.8e-30 134.0 89 78.7
QL11p028820 Quercus lobata HOM05D004093 ORTHO05D004981 6.8e-30 134.0 89 78.7
Phvul.002G318600 Phaseolus vulgaris HOM05D004093 ORTHO05D004981 8.8e-30 133.7 89 77.5
PGR119G0904 Punica granatum HOM05D004093 ORTHO05D004981 8.8e-30 133.7 89 77.5
RcHm_v2.0_Chr6g0247831 Rosa chinensis HOM05D004093 ORTHO05D004981 8.8e-30 133.7 91 75.8
vmacro01935 Vaccinium macrocarpon HOM05D004093 ORTHO05D004981 8.8e-30 133.7 88 78.4
SGA_v2.0_scaffold219G42544 Striga asiatica HOM05D004093 ORTHO05D004981 1.2e-29 133.3 89 77.5
Dinv09528 Davidia involucrata HOM05D004093 ORTHO05D004981 1.5e-29 132.9 89 76.4
Glyma.05G236700 Glycine max HOM05D004093 ORTHO05D004981 1.5e-29 132.9 89 77.5
Actinidia04397 Actinidia chinensis HOM05D004093 ORTHO05D004981 2.0e-29 132.5 91 75.8
Medtr8g104740 Medicago truncatula HOM05D004093 ORTHO05D004981 2.0e-29 132.5 89 77.5
TWI14G0771 Tripterygium wilfordii HOM05D004093 ORTHO05D004981 2.0e-29 132.5 91 74.7
MD10G1112200 Malus domestica HOM05D004093 ORTHO05D004981 2.6e-29 132.1 91 74.7
BraA01t00441Z Brassica rapa HOM05D004093 ORTHO05D004981 3.4e-29 131.7 96 71.9
Ca_17297_v3 Cicer arietinum L. HOM05D004093 ORTHO05D004981 4.4e-29 131.3 89 76.4
Oeu018200.1 Olea europaea HOM05D004093 ORTHO05D004981 4.4e-29 131.3 89 75.3
Ah.05g177500 Amaranthus hybridus HOM05D004093 ORTHO05D004981 5.7e-29 131.0 91 74.7
ClCG10G009970 Citrullus lanatus HOM05D004093 ORTHO05D004981 5.7e-29 131.0 91 75.8
ECA240G1647 Erigeron canadensis HOM05D004093 ORTHO05D004981 5.7e-29 131.0 91 73.6
Migut.N01121 Erythranthe guttata HOM05D004093 ORTHO05D004981 5.7e-29 131.0 89 75.3
TPR.G32673 Trifolium pratense HOM05D004093 ORTHO05D004981 5.7e-29 131.0 89 76.4
Ca_17304_v3 Cicer arietinum L. HOM05D004093 ORTHO05D004981 7.5e-29 130.6 90 74.4
Eucgr.I02505 Eucalyptus grandis HOM05D004093 ORTHO05D004981 7.5e-29 130.6 91 74.7
Hma1.2p1_1758F.1_g301170 Hydrangea macrophylla HOM05D004093 ORTHO05D004981 7.5e-29 130.6 86 79.1
Sed0024148 Sechium edule HOM05D004093 ORTHO05D004981 7.5e-29 130.6 91 74.7
Nitab4.5_0000772g0040 Nicotiana tabacum HOM05D004093 ORTHO05D004981 9.8e-29 130.2 88 76.1
MSTRG.27768 Avicennia marina HOM05D004093 ORTHO05D004981 1.3e-28 129.8 88 76.1
FvH4_2g03040 Fragaria vesca HOM05D004093 ORTHO05D004981 1.3e-28 129.8 91 73.6
FAN24G1787 Fragaria x ananassa HOM05D004093 ORTHO05D004981 1.3e-28 129.8 91 73.6
FAN27G3135 Fragaria x ananassa HOM05D004093 ORTHO05D004981 1.3e-28 129.8 91 73.6
Lalb_Chr16g0387791 Lupinus albus HOM05D004093 ORTHO05D004981 1.3e-28 129.8 86 77.9
Potri.009G084300 Populus trichocarpa HOM05D004093 ORTHO05D004981 1.3e-28 129.8 90 74.4
Prupe.8G151800 Prunus persica HOM05D004093 ORTHO05D004981 1.3e-28 129.8 91 72.5
arahy.Tifrunner.gnm1.ann1.14EEYB Arachis hypogaea HOM05D004093 ORTHO05D004981 1.7e-28 129.4 89 74.2
C09p50660 Brassica napus HOM05D004093 ORTHO05D004981 1.7e-28 129.4 96 71.9
HanXRQChr03g0069101 Helianthus annuus HOM05D004093 ORTHO05D004981 1.7e-28 129.4 91 72.5
Lsat_1_v5_gn_9_113901 Lactuca sativa HOM05D004093 ORTHO05D004981 1.7e-28 129.4 91 72.5
Thecc.02G031600 Theobroma cacao HOM05D004093 ORTHO05D004981 1.7e-28 129.4 91 76.9
TWI59G0012 Tripterygium wilfordii HOM05D004093 ORTHO05D004981 1.7e-28 129.4 91 73.6
AUR62023347 Chenopodium quinoa HOM05D004093 ORTHO05D004981 2.2e-28 129.0 89 75.3
ECA233G6085 Erigeron canadensis HOM05D004093 ORTHO05D004981 2.2e-28 129.0 91 72.5
FAN15G0664 Fragaria x ananassa HOM05D004093 ORTHO05D004981 2.2e-28 129.0 89 74.2
Sabra09G0065000 Salix brachista HOM05D004093 ORTHO05D004981 2.2e-28 129.0 89 76.4
Atru.chr5.2252 Acer truncatum HOM05D004093 ORTHO05D004981 2.8e-28 128.6 91 73.6
Thhalv10024609m.g Eutrema salsugineum HOM05D004093 ORTHO05D004981 2.8e-28 128.6 91 72.5
BcaC09g52186 Brassica carinata HOM05D004093 ORTHO05D004981 3.7e-28 128.3 91 72.5
A01p04580 Brassica napus HOM05D004093 ORTHO05D004981 3.7e-28 128.3 91 72.5
C01p04970 Brassica napus HOM05D004093 ORTHO05D004981 3.7e-28 128.3 91 72.5
BolC1t00478H Brassica oleracea HOM05D004093 ORTHO05D004981 3.7e-28 128.3 91 72.5
BraA03t15310Z Brassica rapa HOM05D004093 ORTHO05D004981 3.7e-28 128.3 91 72.5
CANSAT25G3849 Cannabis sativa HOM05D004093 ORTHO05D004981 3.7e-28 128.3 85 77.6
Nitab4.5_0010657g0010 Nicotiana tabacum HOM05D004093 ORTHO05D004981 3.7e-28 128.3 88 75.0
PSO210G2081 Papaver somniferum HOM05D004093 ORTHO05D004981 3.7e-28 128.3 87 75.9
Hund17142 Selenicereus undatus HOM05D004093 ORTHO05D004981 3.7e-28 128.3 87 75.9
arahy.Tifrunner.gnm1.ann1.K8EMZF Arachis hypogaea HOM05D004093 ORTHO05D004981 4.8e-28 127.9 89 73.0
AUR62013810 Chenopodium quinoa HOM05D004093 ORTHO05D004981 4.8e-28 127.9 89 74.2
Aa31sc178G40 Aethionema arabicum HOM05D004093 ORTHO05D004981 6.3e-28 127.5 91 72.5
AL7G17710 Arabidopsis lyrata HOM05D004093 ORTHO05D004981 6.3e-28 127.5 91 71.4
BcaNung04674 Brassica carinata HOM05D004093 ORTHO05D004981 6.3e-28 127.5 91 72.5
CARHR241850 Cardamine hirsuta HOM05D004093 ORTHO05D004981 6.3e-28 127.5 91 71.4
BcaC01g00967 Brassica carinata HOM05D004093 ORTHO05D004981 8.3e-28 127.1 91 71.4
A08p17410 Brassica napus HOM05D004093 ORTHO05D004981 8.3e-28 127.1 91 71.4
A08p17440 Brassica napus HOM05D004093 ORTHO05D004981 8.3e-28 127.1 91 71.4
C03p86430 Brassica napus HOM05D004093 ORTHO05D004981 8.3e-28 127.1 91 71.4
BolC3t20936H Brassica oleracea HOM05D004093 ORTHO05D004981 8.3e-28 127.1 91 71.4
Lj5C222T15 Lonicera japonica HOM05D004093 ORTHO05D004981 8.3e-28 127.1 91 73.6
PSO447G0184 Papaver somniferum HOM05D004093 ORTHO05D004981 8.3e-28 127.1 89 74.2
EL10Ac1g00697 Beta vulgaris HOM05D004093 ORTHO05D004981 1.1e-27 126.7 85 76.5
Medtr4g052070 Medicago truncatula HOM05D004093 ORTHO05D004981 1.1e-27 126.7 91 71.4
BcaB03g11876 Brassica carinata HOM05D004093 ORTHO05D004981 1.4e-27 126.3 91 71.4
A02p41650 Brassica napus HOM05D004093 ORTHO05D004981 1.4e-27 126.3 91 72.5
HanXRQChr16g0510261 Helianthus annuus HOM05D004093 ORTHO05D004981 1.4e-27 126.3 88 71.6
Oeu037299.1 Olea europaea HOM05D004093 ORTHO05D004981 1.4e-27 126.3 86 76.7
Solyc01g106740.4 Solanum lycopersicum HOM05D004093 ORTHO05D004981 1.4e-27 126.3 88 73.9
ATR0767G039 Amborella trichopoda HOM05D004093 ORTHO05D004981 1.8e-27 125.9 88 73.9
AT4G33760 Arabidopsis thaliana HOM05D004093 ORTHO05D004981 1.8e-27 125.9 91 70.3
C09p10190 Brassica napus HOM05D004093 ORTHO05D004981 1.8e-27 125.9 96 70.8
Carub.0007s0667 Capsella rubella HOM05D004093 ORTHO05D004981 1.8e-27 125.9 91 70.3
CAN.G606.83 Capsicum annuum HOM05D004093 ORTHO05D004981 1.8e-27 125.9 88 73.9
Lj4g0018571 Lotus japonicus HOM05D004093 ORTHO05D004981 3.1e-27 125.2 86 74.4
Sp7g31500 Schrenkiella parvula HOM05D004093 ORTHO05D004981 4.1e-27 124.8 91 70.3
Sed0011100 Sechium edule HOM05D004093 ORTHO05D004981 4.1e-27 124.8 89 73.0
PGSC0003DMG402005133 Solanum tuberosum HOM05D004093 ORTHO05D004981 4.1e-27 124.8 88 72.7
TAR159G0001 Trochodendron aralioides HOM05D004093 ORTHO05D004981 4.1e-27 124.8 91 72.5
C04p37220 Brassica napus HOM05D004093 ORTHO05D004981 5.4e-27 124.4 96 70.8
MBI16_g34665_MAGBIO Magnolia biondii HOM05D004093 ORTHO05D004981 5.4e-27 124.4 87 73.6
Os01g0153400 Oryza sativa ssp. japonica HOM05D004093 ORTHO05D004981 5.4e-27 124.4 89 70.8
DCAR_021934 Daucus carota HOM05D004093 ORTHO05D004981 7.0e-27 124.0 88 73.9
Aqoxy7G02734 Aquilegia oxysepala HOM05D004093 ORTHO05D004981 9.1e-27 123.6 86 75.6
Sopen01g049060 Solanum pennellii HOM05D004093 ORTHO05D004981 9.1e-27 123.6 88 72.7
Aqoxy2G01432 Aquilegia oxysepala HOM05D004093 ORTHO05D004981 1.6e-26 122.9 86 74.4
Cc02_g20210 Coffea canephora HOM05D004093 ORTHO05D004981 1.6e-26 122.9 87 72.4
COL.COLO4_17799 Corchorus olitorius HOM05D004093 ORTHO05D004981 2.0e-26 122.5 89 71.9
Medtr1g113700 Medicago truncatula HOM05D004093 ORTHO05D004981 2.7e-26 122.1 96 69.8
unitig_62.g23638 Utricularia gibba HOM05D004093 ORTHO05D004981 3.5e-26 121.7 86 73.3
BcaC04g23281 Brassica carinata HOM05D004093 ORTHO05D004981 4.5e-26 121.3 90 72.2
CDE04G3016 Ceratophyllum demersum HOM05D004093 ORTHO05D004981 4.5e-26 121.3 91 71.4
CDE07G1203 Ceratophyllum demersum HOM05D004093 ORTHO05D004981 4.5e-26 121.3 91 71.4
Gohir.A01G180900 Gossypium hirsutum HOM05D004093 ORTHO05D004981 5.9e-26 120.9 88 72.7
Gohir.D01G172000 Gossypium hirsutum HOM05D004093 ORTHO05D004981 5.9e-26 120.9 88 72.7
Gorai.002G213600 Gossypium raimondii HOM05D004093 ORTHO05D004981 5.9e-26 120.9 88 72.7
THA.LOC104807205 Tarenaya hassleriana HOM05D004093 ORTHO05D004981 5.9e-26 120.9 88 69.3
Duzib052G0943 Durio zibethinus HOM05D004093 ORTHO05D004981 1.3e-25 119.8 89 70.8
Peaxi162Scf00016g03248 Petunia axillaris HOM05D004093 ORTHO05D004981 1.3e-25 119.8 88 70.5
HPP92_001209 Vanilla planifolia HOM05D004093 ORTHO05D004981 1.3e-25 119.8 87 70.1
Zm00001eb124020 Zea mays HOM05D004093 ORTHO05D004981 1.3e-25 119.8 87 70.1
SEGI_06015 Sequoiadendron giganteum HOM05D004093 ORTHO05D004981 1.9e-24 115.9 87 67.8
SEGI_18816 Sequoiadendron giganteum HOM05D004093 ORTHO05D004981 1.9e-24 115.9 87 67.8
SEGI_31310 Sequoiadendron giganteum HOM05D004093 ORTHO05D004981 7.2e-24 114.0 90 64.4
Mapoly0029s0082 Marchantia polymorpha HOM05D004093 ORTHO05D004981 8.0e-23 110.5 86 67.4
CSS0049011 Camellia sinensis var. sinensis HOM05D004093 ORTHO05D004981 2.3e-22 109.0 91 68.1
CBR_g7978 Chara braunii HOM05D004093 ORTHO05D004981 6.8e-22 107.5 89 61.8
BcaB04g19406 Brassica carinata HOM05D004093 ORTHO05D004981 1.2e-21 106.7 79 72.2
Pp3c20_5000 Physcomitrium patens HOM05D004093 ORTHO05D004981 2.6e-21 105.5 89 60.7
SMO364G0944 Selaginella moellendorffii HOM05D004093 ORTHO05D004981 2.6e-21 105.5 85 62.4
AagrBONN_evm.TU.Sc2ySwM_117.2705 Anthoceros agrestis HOM05D004093 ORTHO05D004981 4.4e-21 104.8 86 64.0
AagrBONN_evm.TU.Sc2ySwM_117.2710 Anthoceros agrestis HOM05D004093 ORTHO05D004981 4.4e-21 104.8 86 64.0
PRCOL_00006371 Prasinoderma coloniale HOM05D004093 ORTHO05D004981 1.1e-19 100.1 86 59.3
MCO14G538 Micromonas commoda HOM05D004093 ORTHO05D004981 2.4e-19 99.0 85 60.0
Cre09.g390986 Chlamydomonas reinhardtii HOM05D004093 ORTHO05D004981 2.0e-18 95.9 86 58.1
QL11p028781 Quercus lobata HOM05D004093 ORTHO05D004981 2.3e-17 92.4 68 70.6
CSS0016143 Camellia sinensis var. sinensis HOM05D004093 ORTHO05D004981 8.9e-14 80.5 105 49.5


User provided reference genes

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