Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0013372 Camellia sinensis var. sinensis HOM05D001829 ORTHO05D003548 4.5e-103 377.9 183 100.0
Actinidia26178 Actinidia chinensis HOM05D001829 ORTHO05D003548 2.8e-28 129.4 74 83.8
Dinv19424 Davidia involucrata HOM05D001829 ORTHO05D003548 3.8e-25 119.0 74 77.0
Dinv29604 Davidia involucrata HOM05D001829 ORTHO05D003548 4.9e-25 118.6 74 78.4
CSS0015167 Camellia sinensis var. sinensis HOM05D001829 ORTHO05D003548 6.4e-25 118.2 74 74.3
HanXRQChr06g0182771 Helianthus annuus HOM05D001829 ORTHO05D003548 1.9e-24 116.7 107 57.9
Rhsim05G0113200 Rhododendron simsii HOM05D001829 ORTHO05D003548 4.2e-24 115.5 74 73.0
Rhsim11G0121900 Rhododendron simsii HOM05D001829 ORTHO05D003548 2.1e-23 113.2 92 62.0
HanXRQChr03g0067961 Helianthus annuus HOM05D001829 ORTHO05D003548 3.9e-22 109.0 84 60.7
Hma1.2p1_0633F.1_g192740 Hydrangea macrophylla HOM05D001829 ORTHO05D003548 3.9e-22 109.0 74 70.3
Hma1.2p1_0884F.1_g232370 Hydrangea macrophylla HOM05D001829 ORTHO05D003548 3.3e-21 105.9 74 71.6
GSVIVG01023232001 Vitis vinifera HOM05D001829 ORTHO05D003548 4.3e-21 105.5 74 66.2
Actinidia01613 Actinidia chinensis HOM05D000487 ORTHO05D000405 1.6e-20 103.6 86 64.0
vmacro01706 Vaccinium macrocarpon HOM05D001829 ORTHO05D003548 1.1e-19 100.9 87 58.6
Potri.003G005700 Populus trichocarpa HOM05D001829 ORTHO05D003548 2.0e-18 96.7 76 60.5
Ciclev10000901m.g Citrus clementina HOM05D001829 ORTHO05D003548 5.8e-18 95.1 72 63.9
HanXRQChr09g0249081 Helianthus annuus HOM05D001829 ORTHO05D003548 5.8e-18 95.1 85 54.1
TAR381G0284 Trochodendron aralioides HOM05D001829 ORTHO05D003548 1.3e-17 94.0 76 59.2
Atru.chr6.543 Acer truncatum HOM05D001829 ORTHO05D003548 1.7e-17 93.6 74 60.8
QL02p100929 Quercus lobata HOM05D001829 ORTHO05D003548 1.9e-16 90.1 74 59.5
TAR628G0621 Trochodendron aralioides HOM05D001829 ORTHO05D003548 2.5e-16 89.7 76 55.3
Potri.004G225800 Populus trichocarpa HOM05D001829 ORTHO05D003548 3.2e-16 89.4 74 59.5
Manes.07G025700 Manihot esculenta HOM05D001829 ORTHO05D003548 7.1e-16 88.2 74 62.2
Oeu045913.1 Olea europaea HOM05D001829 ORTHO05D003548 2.7e-15 86.3 74 56.8
CiPaw.05G003800 Carya illinoinensis HOM05D001829 ORTHO05D003548 3.9e-14 82.4 74 55.4
PSO017G6510 Papaver somniferum HOM05D001829 ORTHO05D003548 3.9e-14 82.4 74 51.4
Sabra01G0171500 Salix brachista HOM05D001829 ORTHO05D003548 6.7e-14 81.6 74 54.1
PSO170G5852 Papaver somniferum HOM05D001829 ORTHO05D003548 1.5e-13 80.5 74 50.0
Haze_10033 Corylus avellana HOM05D001829 ORTHO05D003548 4.3e-13 79.0 76 55.3
Oeu030852.1 Olea europaea HOM05D001829 ORTHO05D003548 7.4e-13 78.2 76 52.6
SalBow7G4033 Salvia bowleyana HOM05D001829 ORTHO05D003548 1.3e-12 77.4 75 54.7
Duzib248G0405 Durio zibethinus HOM05D001829 ORTHO05D003548 1.6e-12 77.0 74 54.1
Sabra03G0002900 Salix brachista HOM05D001829 ORTHO05D007093 1.6e-12 77.0 92 48.9
vmacro19858 Vaccinium macrocarpon HOM05D001829 ORTHO05D003548 2.2e-12 76.6 72 54.2
ECA236G4953 Erigeron canadensis HOM05D001829 ORTHO05D003548 3.7e-12 75.9 75 56.0
Manes.10G116400 Manihot esculenta HOM05D001829 ORTHO05D003548 3.7e-12 75.9 72 56.9
Migut.N00848 Erythranthe guttata HOM05D001829 ORTHO05D003548 8.2e-12 74.7 69 50.7
Solyc01g103420.4 Solanum lycopersicum HOM05D001829 ORTHO05D003548 8.2e-12 74.7 87 48.3
Thecc.02G016800 Theobroma cacao HOM05D001829 ORTHO05D003548 8.2e-12 74.7 75 54.7
Nn5g27503 Nelumbo nucifera HOM05D001829 ORTHO05D003548 3.1e-11 72.8 72 50.0
ATR1136G031 Amborella trichopoda HOM05D001829 ORTHO05D003548 6.9e-11 71.6 76 48.7
Lalb_Chr15g0090791 Lupinus albus HOM05D001829 ORTHO05D003548 6.9e-11 71.6 71 52.1
Duzib132G1055 Durio zibethinus HOM05D001829 ORTHO05D003548 1.2e-10 70.9 72 51.4
DCAR_029162 Daucus carota HOM05D001829 ORTHO05D003548 1.5e-10 70.5 83 48.2
Actinidia38991 Actinidia chinensis HOM05D001829 ORTHO05D003548 2.0e-10 70.1 42 76.2
CAN.G855.15 Capsicum annuum HOM05D001829 ORTHO05D003548 2.6e-10 69.7 74 47.3
DCAR_006663 Daucus carota HOM05D001829 ORTHO05D003548 4.5e-10 68.9 85 44.7
Phvul.006G219800 Phaseolus vulgaris HOM05D001829 ORTHO05D003548 4.5e-10 68.9 74 48.6
MSTRG.27868 Avicennia marina HOM05D001829 ORTHO05D003548 5.9e-10 68.6 62 56.5
SGA_v2.0_scaffold249G44938 Striga asiatica HOM05D001829 ORTHO05D003548 3.8e-09 65.9 52 59.6
Glyma.16G002300 Glycine max HOM05D001829 ORTHO05D003548 5.0e-09 65.5 74 47.3
Gorai.008G045900 Gossypium raimondii HOM05D001829 ORTHO05D003548 5.0e-09 65.5 74 47.3
Sopen01g045770 Solanum pennellii HOM05D001829 ORTHO05D003548 5.0e-09 65.5 74 45.9
Peaxi162Scf00152g01538 Petunia axillaris HOM05D001829 ORTHO05D003548 6.5e-09 65.1 75 48.0
Nitab4.5_0000787g0020 Nicotiana tabacum HOM05D001829 ORTHO05D003548 8.5e-09 64.7 74 45.9
Sopen10g009260 Solanum pennellii HOM05D001829 ORTHO05D003548 8.5e-09 64.7 72 51.4
Peaxi162Scf00011g01537 Petunia axillaris HOM05D001829 ORTHO05D003548 1.1e-08 64.3 72 47.2
HPP92_004491 Vanilla planifolia HOM05D001829 ORTHO05D003548 1.1e-08 64.3 76 46.1
VMungo0540G0490 Vigna mungo HOM05D001829 ORTHO05D003548 1.4e-08 63.9 69 47.8
Lalb_Chr18g0061071 Lupinus albus HOM05D001829 ORTHO05D003548 1.9e-08 63.5 72 51.4
Nitab4.5_0005169g0060 Nicotiana tabacum HOM05D001829 ORTHO05D003548 1.9e-08 63.5 74 44.6
Ca_00041_v3 Cicer arietinum L. HOM05D001829 ORTHO05D003548 2.5e-08 63.2 73 46.6
SGA_v2.0_scaffold42G15901 Striga asiatica HOM05D001829 ORTHO05D003548 2.5e-08 63.2 71 47.9
Gohir.D12G043600 Gossypium hirsutum HOM05D001829 ORTHO05D003548 4.2e-08 62.4 74 45.9
Medtr2g005600 Medicago truncatula HOM05D001829 ORTHO05D003548 5.5e-08 62.0 73 45.2
Solyc10g044450.3 Solanum lycopersicum HOM05D001829 ORTHO05D003548 5.5e-08 62.0 72 50.0
PGR042G1417 Punica granatum HOM05D001829 ORTHO05D003548 7.2e-08 61.6 65 50.8
Lj5C270G4 Lonicera japonica HOM05D001829 ORTHO05D001339 9.4e-08 61.2 43 67.4
TPR.G29252 Trifolium pratense HOM05D001829 ORTHO05D003548 1.6e-07 60.5 73 43.8
Gohir.A12G044600 Gossypium hirsutum HOM05D001829 ORTHO05D003548 2.1e-07 60.1 74 44.6
Cc02_g23320 Coffea canephora HOM05D001829 ORTHO05D003548 6.1e-07 58.5 71 47.9
Migut.B00752 Erythranthe guttata HOM05D001829 ORTHO05D003548 7.9e-07 58.2 71 49.3
Glyma.12G165900 Glycine max HOM05D001829 ORTHO05D003548 7.9e-07 58.2 74 44.6
Cfa008128 Carpinus fangiana HOM05D001829 ORTHO05D003548 1.4e-06 57.4 74 50.0
Prupe.1G550000 Prunus persica HOM05D001829 ORTHO05D003548 1.4e-06 57.4 70 50.0
TPR.G2078 Trifolium pratense HOM05D001829 ORTHO05D003548 1.8e-06 57.0 74 41.9
CANSAT54G1136 Cannabis sativa HOM05D001829 ORTHO05D003548 2.3e-06 56.6 73 41.1
MD15G1403800 Malus domestica HOM05D001829 ORTHO05D003548 2.3e-06 56.6 67 50.7
Oeu043625.3 Olea europaea HOM05D001829 ORTHO05D003548 3.0e-06 56.2 74 45.9
Lsat_1_v5_gn_7_76760 Lactuca sativa HOM05D001829 ORTHO05D003548 3.9e-06 55.8 76 47.4
MD08G1216600 Malus domestica HOM05D001829 ORTHO05D003548 3.9e-06 55.8 92 40.2
HPP92_004463 Vanilla planifolia HOM05D001829 ORTHO05D003548 5.1e-06 55.5 66 43.9
COL.COLO4_17710 Corchorus olitorius HOM05D001829 ORTHO05D003548 8.8e-06 54.7 65 50.8
Psat1g222920 Pisum sativum HOM05D001829 ORTHO05D003548 8.8e-06 54.7 73 43.8
unitig_578.g15958 Utricularia gibba HOM05D001829 ORTHO05D003548 8.8e-06 54.7 72 48.6


User provided reference genes

Program Settings