Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0009710 Camellia sinensis var. sinensis HOM05D005526 ORTHO05D006802 9.1e-81 303.5 154 100.0
Dinv30571 Davidia involucrata HOM05D005526 ORTHO05D006802 4.7e-37 158.3 79 98.7
vmacro16915 Vaccinium macrocarpon HOM05D005526 ORTHO05D006802 4.7e-37 158.3 86 93.0
Rhsim12G0193000 Rhododendron simsii HOM05D005526 ORTHO05D006802 1.4e-36 156.8 95 87.4
Dinv38097 Davidia involucrata HOM05D005526 ORTHO05D006802 6.8e-36 154.5 79 97.5
HanXRQChr10g0303081 Helianthus annuus HOM05D005526 ORTHO05D006802 6.8e-36 154.5 83 95.2
ECA234G2940 Erigeron canadensis HOM05D005526 ORTHO05D006802 1.2e-35 153.7 79 96.2
Lj5A68T70 Lonicera japonica HOM05D005526 ORTHO05D006802 1.5e-35 153.3 85 89.4
SGA_v2.0_scaffold16G07615 Striga asiatica HOM05D005526 ORTHO05D006802 1.5e-35 153.3 82 95.1
CSS0037293 Camellia sinensis var. sinensis HOM05D005526 ORTHO05D006802 3.4e-35 152.1 80 95.0
Actinidia08810 Actinidia chinensis HOM05D005526 ORTHO05D006802 4.4e-35 151.8 79 96.2
Oeu052283.1 Olea europaea HOM05D005526 ORTHO05D006802 4.4e-35 151.8 83 90.4
DCAR_025483 Daucus carota HOM05D005526 ORTHO05D006802 5.8e-35 151.4 79 93.7
Peaxi162Scf00207g00731 Petunia axillaris HOM05D005526 ORTHO05D006802 7.6e-35 151.0 84 89.3
A07p26570 Brassica napus HOM05D005526 ORTHO05D006802 1.7e-34 149.8 83 89.2
SalBow2G2365 Salvia bowleyana HOM05D005526 ORTHO05D006802 2.2e-34 149.4 79 94.9
Sopen06g025280 Solanum pennellii HOM05D005526 ORTHO05D006802 2.2e-34 149.4 85 87.1
MSTRG.9436 Avicennia marina HOM05D005526 ORTHO05D006802 2.9e-34 149.1 79 93.7
BcaC08g45297 Brassica carinata HOM05D005526 ORTHO05D006802 2.9e-34 149.1 86 86.0
C06p28990 Brassica napus HOM05D005526 ORTHO05D006802 3.7e-34 148.7 82 89.0
Nitab4.5_0000620g0060 Nicotiana tabacum HOM05D005526 ORTHO05D006802 6.4e-34 147.9 85 85.9
Aa31LG4G500 Aethionema arabicum HOM05D005526 ORTHO05D006802 8.4e-34 147.5 112 72.3
Nitab4.5_0013710g0010 Nicotiana tabacum HOM05D005526 ORTHO05D006802 8.4e-34 147.5 83 88.0
THA.LOC104812497 Tarenaya hassleriana HOM05D005526 ORTHO05D006802 8.4e-34 147.5 79 92.4
Lsat_1_v5_gn_5_132520 Lactuca sativa HOM05D005526 ORTHO05D006802 1.1e-33 147.1 75 97.3
PGSC0003DMG401028513 Solanum tuberosum HOM05D005526 ORTHO05D006802 1.1e-33 147.1 83 88.0
BcaB02g07290 Brassica carinata HOM05D005526 ORTHO05D006802 1.4e-33 146.7 82 87.8
ClCG07G012810 Citrullus lanatus HOM05D005526 ORTHO05D006802 1.4e-33 146.7 82 89.0
Cc04_g04010 Coffea canephora HOM05D005526 ORTHO05D006802 1.4e-33 146.7 82 90.2
Migut.D01055 Erythranthe guttata HOM05D005526 ORTHO05D006802 1.9e-33 146.4 79 93.7
SGA_v2.0_scaffold37G14789 Striga asiatica HOM05D005526 ORTHO05D006802 1.9e-33 146.4 83 88.0
Cfa002011 Carpinus fangiana HOM05D005526 ORTHO05D006802 2.4e-33 146.0 79 91.1
CiPaw.01G244400 Carya illinoinensis HOM05D005526 ORTHO05D006802 2.4e-33 146.0 79 91.1
QL05p027824 Quercus lobata HOM05D005526 ORTHO05D006802 2.4e-33 146.0 87 82.8
Cpa.g.sc336.8 Carica papaya HOM05D005526 ORTHO05D006802 3.2e-33 145.6 81 88.9
TAR383G0281 Trochodendron aralioides HOM05D005526 ORTHO05D006802 3.2e-33 145.6 79 91.1
BolC6t38065H Brassica oleracea HOM05D005526 ORTHO05D006802 4.1e-33 145.2 105 72.4
TWI18G0833 Tripterygium wilfordii HOM05D005526 ORTHO05D006802 4.1e-33 145.2 79 89.9
TWI75G1755 Tripterygium wilfordii HOM05D005526 ORTHO05D006802 4.1e-33 145.2 79 89.9
FAN05G1558 Fragaria x ananassa HOM05D005526 ORTHO05D006802 2.1e-32 142.9 81 86.4
Sp5g35600 Schrenkiella parvula HOM05D005526 ORTHO05D006802 2.1e-32 142.9 79 88.6
Thhalv10018648m.g Eutrema salsugineum HOM05D005526 ORTHO05D006802 2.7e-32 142.5 79 88.6
TPR.G37278 Trifolium pratense HOM05D005526 ORTHO05D006802 2.7e-32 142.5 85 83.5
MD09G1221000 Malus domestica HOM05D005526 ORTHO05D006802 3.5e-32 142.1 83 86.7
Manes.04G116500 Manihot esculenta HOM05D005526 ORTHO05D006802 3.5e-32 142.1 79 89.9
Duzib235G1092 Durio zibethinus HOM05D005526 ORTHO05D006802 4.6e-32 141.7 79 87.3
Gohir.A06G112600 Gossypium hirsutum HOM05D005526 ORTHO05D006802 4.6e-32 141.7 79 87.3
Gohir.D06G117200 Gossypium hirsutum HOM05D005526 ORTHO05D006802 4.6e-32 141.7 79 87.3
Gorai.010G134800 Gossypium raimondii HOM05D005526 ORTHO05D006802 4.6e-32 141.7 79 87.3
Thecc.06G073100 Theobroma cacao HOM05D005526 ORTHO05D006802 4.6e-32 141.7 79 87.3
CARHR074270 Cardamine hirsuta HOM05D005526 ORTHO05D006802 6.0e-32 141.4 80 88.8
CiPaw.02G154800 Carya illinoinensis HOM05D005526 ORTHO05D006802 6.0e-32 141.4 79 87.3
Ciclev10025661m.g Citrus clementina HOM05D005526 ORTHO05D006802 6.0e-32 141.4 79 88.6
CsaV3_4G001390 Cucumis sativus L. HOM05D005526 ORTHO05D006802 6.0e-32 141.4 79 88.6
Nn2g11952 Nelumbo nucifera HOM05D005526 ORTHO05D006802 6.0e-32 141.4 79 88.6
RcHm_v2.0_Chr2g0136631 Rosa chinensis HOM05D005526 ORTHO05D006802 7.8e-32 141.0 83 83.1
Sed0002477 Sechium edule HOM05D005526 ORTHO05D006802 7.8e-32 141.0 80 87.5
AT3G06820 Arabidopsis thaliana HOM05D005526 ORTHO05D006802 1.0e-31 140.6 80 87.5
GSVIVG01017250001 Vitis vinifera HOM05D005526 ORTHO05D006802 1.3e-31 140.2 77 88.3
Atru.chr1.3093 Acer truncatum HOM05D005526 ORTHO05D006802 1.7e-31 139.8 79 87.3
FvH4_6g30340 Fragaria vesca HOM05D005526 ORTHO05D006802 1.7e-31 139.8 79 86.1
FAN02G2127 Fragaria x ananassa HOM05D005526 ORTHO05D006802 1.7e-31 139.8 79 86.1
Lj3g0017842 Lotus japonicus HOM05D005526 ORTHO05D006802 3.0e-31 139.0 79 87.3
PGR031G1627 Punica granatum HOM05D005526 ORTHO05D006802 3.9e-31 138.7 79 87.3
CDE02G1452 Ceratophyllum demersum HOM05D005526 ORTHO05D006802 5.1e-31 138.3 81 85.2
CDE01G0292 Ceratophyllum demersum HOM05D005526 ORTHO05D006802 6.6e-31 137.9 81 85.2
Glyma.13G363400 Glycine max HOM05D005526 ORTHO05D006802 8.6e-31 137.5 79 86.1
Solyc06g067990.3 Solanum lycopersicum HOM05D005526 ORTHO05D006802 1.1e-30 137.1 77 87.0
Ca_01085_v3 Cicer arietinum L. HOM05D005526 ORTHO05D006802 1.5e-30 136.7 79 86.1
Medtr2g103110 Medicago truncatula HOM05D005526 ORTHO05D006802 1.5e-30 136.7 79 86.1
Phvul.005G174900 Phaseolus vulgaris HOM05D005526 ORTHO05D006802 1.5e-30 136.7 79 83.5
Prupe.3G079900 Prunus persica HOM05D005526 ORTHO05D006802 1.5e-30 136.7 79 87.3
Sabra01G0138900 Salix brachista HOM05D005526 ORTHO05D006802 1.5e-30 136.7 82 81.7
CANSAT56G0953 Cannabis sativa HOM05D005526 ORTHO05D006802 1.9e-30 136.3 79 87.3
Lalb_Chr14g0373671 Lupinus albus HOM05D005526 ORTHO05D006802 1.9e-30 136.3 101 70.3
PSO170G3249 Papaver somniferum HOM05D005526 ORTHO05D006802 1.9e-30 136.3 79 86.1
AT1G80210 Arabidopsis thaliana HOM05D005526 ORTHO05D006802 3.3e-30 135.6 80 85.0
Aqoxy7G02084 Aquilegia oxysepala HOM05D005526 ORTHO05D006802 4.3e-30 135.2 79 84.8
MBI01_g11875_MAGBIO Magnolia biondii HOM05D005526 ORTHO05D006802 5.6e-30 134.8 81 84.0
Glyma.15G010400 Glycine max HOM05D005526 ORTHO05D006802 1.2e-29 133.7 79 83.5
Sc10g0005720 Simmondsia chinensis HOM05D005526 ORTHO05D006802 1.2e-29 133.7 79 83.5
ATR1156G076 Amborella trichopoda HOM05D005526 ORTHO05D006802 1.6e-29 133.3 100 70.0
Eucgr.J03045 Eucalyptus grandis HOM05D005526 ORTHO05D006802 1.6e-29 133.3 79 83.5
AUR62011560 Chenopodium quinoa HOM05D005526 ORTHO05D006802 2.8e-29 132.5 95 73.7
Potri.001G172800 Populus trichocarpa HOM05D005526 ORTHO05D006802 4.7e-29 131.7 79 81.0
MD17G1204400 Malus domestica HOM05D005526 ORTHO05D006802 1.8e-28 129.8 89 77.5
Hund06580 Selenicereus undatus HOM05D005526 ORTHO05D006802 1.8e-28 129.8 80 80.0
Ah.01g020810 Amaranthus hybridus HOM05D005526 ORTHO05D006802 8.9e-28 127.5 75 84.0
SEGI_35764 Sequoiadendron giganteum HOM05D005526 ORTHO05D006802 8.9e-28 127.5 79 77.2
AagrBONN_evm.TU.Sc2ySwM_368.2432 Anthoceros agrestis HOM05D005526 ORTHO05D006802 1.2e-27 127.1 81 76.5
arahy.Tifrunner.gnm1.ann1.FYL3MV Arachis hypogaea HOM05D005526 ORTHO05D006802 1.2e-27 127.1 80 82.5
arahy.Tifrunner.gnm1.ann1.IMA97E Arachis hypogaea HOM05D005526 ORTHO05D006802 1.2e-27 127.1 80 82.5
AUR62016379 Chenopodium quinoa HOM05D005526 ORTHO05D006802 1.2e-27 127.1 79 79.7
VMungo1080G0636 Vigna mungo HOM05D005526 ORTHO05D006802 2.6e-27 125.9 79 77.2
EL10Ac9g21940 Beta vulgaris HOM05D005526 ORTHO05D006802 1.7e-26 123.2 75 78.7
Haze_16512 Corylus avellana HOM05D005526 ORTHO05D006802 4.9e-26 121.7 103 65.0
Oeu014842.2 Olea europaea HOM05D005526 ORTHO05D006802 6.4e-26 121.3 125 55.2
Mapoly0053s0043 Marchantia polymorpha HOM05D005526 ORTHO05D006802 5.4e-25 118.2 79 73.4
Os05g0542600 Oryza sativa ssp. japonica HOM05D005526 ORTHO05D006802 1.2e-24 117.1 79 70.9
FAN09G0405 Fragaria x ananassa HOM05D005526 ORTHO05D006802 1.3e-23 113.6 63 85.7
Pp3c27_4740 Physcomitrium patens HOM05D005526 ORTHO05D006802 1.3e-23 113.6 79 67.1
Zm00001eb294490 Zea mays HOM05D005526 ORTHO05D006802 8.7e-23 110.9 79 70.9
CBR_g46861 Chara braunii HOM05D005526 ORTHO05D006802 3.3e-22 109.0 79 64.6
Zm00001eb342510 Zea mays HOM05D005526 ORTHO05D006802 1.6e-21 106.7 79 68.4
BraA07t30300Z Brassica rapa HOM05D005526 ORTHO05D006802 1.4e-20 103.6 56 87.5
CAN.G395.47 Capsicum annuum HOM05D005526 ORTHO05D006802 2.7e-16 89.4 55 80.0
Gohir.A10G140700 Gossypium hirsutum HOM05D000009 ORTHO05D000008 3.4e-11 72.4 42 81.0
unitig_899.g14780 Utricularia gibba HOM05D005526 ORTHO05D006802 2.2e-10 69.7 54 70.4
Cre11.g475400 Chlamydomonas reinhardtii HOM05D005526 ORTHO05D006802 8.4e-10 67.8 69 53.6
COL.COLO4_12895 Corchorus olitorius HOM05D005526 ORTHO05D006802 3.5e-08 62.4 30 96.7


User provided reference genes

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