Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0009317 Camellia sinensis var. sinensis HOM05D004944 ORTHO05D005989 1.1e-71 273.1 132 100.0
CSS0047173 Camellia sinensis var. sinensis HOM05D004944 ORTHO05D005989 2.4e-66 255.4 161 81.4
Actinidia06272 Actinidia chinensis HOM05D004944 ORTHO05D005989 6.2e-46 187.6 144 68.8
Rhsim07G0062200 Rhododendron simsii HOM05D004944 ORTHO05D005989 4.0e-45 184.9 146 66.4
Dinv32057 Davidia involucrata HOM05D004944 ORTHO05D005989 5.3e-45 184.5 146 65.8
Hma1.2p1_0184F.1_g081120 Hydrangea macrophylla HOM05D004944 ORTHO05D005989 1.4e-42 176.4 147 63.3
Atru.chr11.2502 Acer truncatum HOM05D004944 ORTHO05D005989 1.9e-42 176.0 146 61.6
TPR.G18800 Trifolium pratense HOM05D004944 ORTHO05D005989 9.3e-42 173.7 146 61.0
Ciclev10030882m.g Citrus clementina HOM05D004944 ORTHO05D005989 7.9e-41 170.6 146 58.2
Glyma.11G150100 Glycine max HOM05D004944 ORTHO05D005989 1.3e-40 169.9 146 60.3
Migut.N01817 Erythranthe guttata HOM05D004944 ORTHO05D005989 1.8e-40 169.5 146 60.3
Lj3g0016020 Lotus japonicus HOM05D004944 ORTHO05D005989 2.3e-40 169.1 145 60.7
Lj9C645T11 Lonicera japonica HOM05D004944 ORTHO05D005989 3.0e-40 168.7 168 55.4
Medtr3g022850 Medicago truncatula HOM05D004944 ORTHO05D005989 5.1e-40 167.9 146 59.6
Nn7g36468 Nelumbo nucifera HOM05D004944 ORTHO05D005989 6.7e-40 167.5 146 57.5
GSVIVG01000850001 Vitis vinifera HOM05D004944 ORTHO05D005989 8.7e-40 167.2 146 61.0
TAR636G1724 Trochodendron aralioides HOM05D004944 ORTHO05D005989 1.1e-39 166.8 146 60.3
Thecc.10G005400 Theobroma cacao HOM05D004944 ORTHO05D005989 1.5e-39 166.4 146 59.6
Cfa010847 Carpinus fangiana HOM05D004944 ORTHO05D005989 2.5e-39 165.6 146 59.6
QL04p013327 Quercus lobata HOM05D004944 ORTHO05D005989 4.3e-39 164.9 145 59.3
Haze_03113 Corylus avellana HOM05D004944 ORTHO05D005989 7.4e-39 164.1 146 58.9
TWI15G1108 Tripterygium wilfordii HOM05D004944 ORTHO05D005989 7.4e-39 164.1 146 58.2
Duzib128G1953 Durio zibethinus HOM05D004944 ORTHO05D005989 1.3e-38 163.3 146 56.2
MD02G1296200 Malus domestica HOM05D004944 ORTHO05D005989 1.3e-38 163.3 146 58.2
PGR031G0610 Punica granatum HOM05D004944 ORTHO05D005989 1.6e-38 162.9 146 59.6
VMungo1080G1012 Vigna mungo HOM05D004944 ORTHO05D005989 3.7e-38 161.8 146 57.5
Cfa010848 Carpinus fangiana HOM05D004944 ORTHO05D005989 4.8e-38 161.4 146 57.5
Cc02_g29470 Coffea canephora HOM05D004944 ORTHO05D005989 6.3e-38 161.0 146 58.2
Prupe.7G020900 Prunus persica HOM05D004944 ORTHO05D005989 8.2e-38 160.6 146 56.2
Cpa.g.sc197.13 Carica papaya HOM05D004944 ORTHO05D005989 1.8e-37 159.5 146 57.5
MD07G1077800 Malus domestica HOM05D004944 ORTHO05D005989 1.8e-37 159.5 146 56.2
HanXRQChr05g0145061 Helianthus annuus HOM05D004944 ORTHO05D005989 2.4e-37 159.1 146 55.5
Gorai.013G015500 Gossypium raimondii HOM05D004944 ORTHO05D005989 4.1e-37 158.3 144 56.2
Potri.003G202300 Populus trichocarpa HOM05D004944 ORTHO05D005989 4.1e-37 158.3 146 56.2
Sabra03G0149500 Salix brachista HOM05D004944 ORTHO05D005989 9.0e-37 157.1 145 55.9
ECA232G0518 Erigeron canadensis HOM05D004944 ORTHO05D005989 2.0e-36 156.0 146 55.5
MELO3C012446.2 Cucumis melo HOM05D004944 ORTHO05D005989 2.6e-36 155.6 145 55.2
SGA_v2.0_scaffold5G02935 Striga asiatica HOM05D004944 ORTHO05D005989 2.6e-36 155.6 143 56.6
THA.LOC104819120 Tarenaya hassleriana HOM05D004944 ORTHO05D005989 2.6e-36 155.6 146 54.8
Eucgr.G03259 Eucalyptus grandis HOM05D004944 ORTHO05D005989 5.9e-36 154.5 146 54.8
Carub.0007s0968 Capsella rubella HOM05D004944 ORTHO05D005989 7.6e-36 154.1 146 54.1
CiPaw.13G010200 Carya illinoinensis HOM05D004944 ORTHO05D005989 7.6e-36 154.1 146 56.2
Gohir.D13G014300 Gossypium hirsutum HOM05D004944 ORTHO05D005989 7.6e-36 154.1 144 54.9
CANSAT80G2771 Cannabis sativa HOM05D004944 ORTHO05D005989 1.0e-35 153.7 146 52.7
AL7G21230 Arabidopsis lyrata HOM05D004944 ORTHO05D005989 1.3e-35 153.3 146 53.4
AT4G30870 Arabidopsis thaliana HOM05D004944 ORTHO05D005989 1.7e-35 152.9 146 54.1
CAN.G410.46 Capsicum annuum HOM05D004944 ORTHO05D005989 1.7e-35 152.9 146 55.5
Lalb_Chr04g0263921 Lupinus albus HOM05D004944 ORTHO05D005989 1.7e-35 152.9 146 55.5
Solyc01g068350.3 Solanum lycopersicum HOM05D004944 ORTHO05D005989 2.2e-35 152.5 146 54.8
DCAR_009210 Daucus carota HOM05D004944 ORTHO05D005989 2.9e-35 152.1 146 55.5
Sopen01g030310 Solanum pennellii HOM05D004944 ORTHO05D005989 2.9e-35 152.1 146 54.8
arahy.Tifrunner.gnm1.ann1.YV81B1 Arachis hypogaea HOM05D004944 ORTHO05D005989 3.8e-35 151.8 146 54.8
ClCG05G020810 Citrullus lanatus HOM05D004944 ORTHO05D005989 3.8e-35 151.8 143 54.5
FvH4_7g02220 Fragaria vesca HOM05D004944 ORTHO05D005989 3.8e-35 151.8 144 55.6
FAN06G2455 Fragaria x ananassa HOM05D004944 ORTHO05D005989 3.8e-35 151.8 144 55.6
RcHm_v2.0_Chr1g0319541 Rosa chinensis HOM05D004944 ORTHO05D005989 3.8e-35 151.8 144 55.6
Sc10g0004240 Simmondsia chinensis HOM05D004944 ORTHO05D005989 3.8e-35 151.8 144 52.8
arahy.Tifrunner.gnm1.ann1.L5CKR4 Arachis hypogaea HOM05D004944 ORTHO05D005989 6.5e-35 151.0 146 54.8
FAN01G0470 Fragaria x ananassa HOM05D004944 ORTHO05D005989 1.1e-34 150.2 144 54.2
PSO782G0837 Papaver somniferum HOM05D004944 ORTHO05D005989 1.4e-34 149.8 146 54.1
MBI17_g33308_MAGBIO Magnolia biondii HOM05D004944 ORTHO05D005989 1.9e-34 149.4 144 56.2
FAN03G3505 Fragaria x ananassa HOM05D004944 ORTHO05D005989 2.5e-34 149.1 144 54.9
PSO339G0509 Papaver somniferum HOM05D004944 ORTHO05D005989 2.5e-34 149.1 146 54.1
Carub.0007s3598 Capsella rubella HOM05D004944 ORTHO05D005989 5.5e-34 147.9 146 51.4
Thhalv10024629m.g Eutrema salsugineum HOM05D004944 ORTHO05D005989 1.2e-33 146.7 146 52.7
Lsat_1_v5_gn_9_47141 Lactuca sativa HOM05D004944 ORTHO05D005989 1.6e-33 146.4 134 57.5
Peaxi162Scf00309g00016 Petunia axillaris HOM05D004944 ORTHO05D005989 1.6e-33 146.4 146 54.8
PSO384G2132 Papaver somniferum HOM05D004944 ORTHO05D005989 2.1e-33 146.0 144 53.5
Nitab4.5_0006307g0060 Nicotiana tabacum HOM05D004944 ORTHO05D005989 4.6e-33 144.8 146 52.7
Sed0005559 Sechium edule HOM05D004944 ORTHO05D005989 4.6e-33 144.8 145 51.7
Nitab4.5_0000316g0180 Nicotiana tabacum HOM05D004944 ORTHO05D005989 6.1e-33 144.4 146 52.7
Aqoxy1G00293 Aquilegia oxysepala HOM05D004944 ORTHO05D005989 7.9e-33 144.1 143 52.4
Sp6g04870 Schrenkiella parvula HOM05D004944 ORTHO05D005989 7.9e-33 144.1 146 52.1
unitig_744.g24021 Utricularia gibba HOM05D004944 ORTHO05D005989 7.9e-33 144.1 150 51.3
CARHR238770 Cardamine hirsuta HOM05D004944 ORTHO05D005989 1.0e-32 143.7 140 52.9
EL10Ac2g02867 Beta vulgaris HOM05D004944 ORTHO05D005989 5.1e-32 141.4 155 49.0
BraA09t38244Z Brassica rapa HOM05D004944 ORTHO05D005989 1.9e-31 139.4 147 51.0
vmacro13724 Vaccinium macrocarpon HOM05D004944 ORTHO05D005989 2.5e-31 139.0 82 81.7
A09p26720 Brassica napus HOM05D004944 ORTHO05D005989 3.3e-31 138.7 147 51.0
Aa31LG2G19510 Aethionema arabicum HOM05D004944 ORTHO05D005989 5.7e-31 137.9 143 51.7
BcaB01g01761 Brassica carinata HOM05D004944 ORTHO05D005989 9.7e-31 137.1 147 50.3
BcaC04g21249 Brassica carinata HOM05D004944 ORTHO05D005989 9.7e-31 137.1 146 49.3
C09p33850 Brassica napus HOM05D004944 ORTHO05D005989 9.7e-31 137.1 146 49.3
BolC9t56223H Brassica oleracea HOM05D004944 ORTHO05D005989 9.7e-31 137.1 146 49.3
RcHm_v2.0_Chr3g0488831 Rosa chinensis HOM05D004944 ORTHO05D005989 1.3e-30 136.7 146 51.4
SalBow2G1212 Salvia bowleyana HOM05D004944 ORTHO05D005989 2.2e-30 136.0 204 41.2
Hund15708 Selenicereus undatus HOM05D004944 ORTHO05D005989 3.7e-30 135.2 146 50.7
PSO135G0630 Papaver somniferum HOM05D004944 ORTHO05D005989 8.2e-30 134.0 146 47.9
Thhalv10024809m.g Eutrema salsugineum HOM05D004944 ORTHO05D005989 1.4e-29 133.3 147 47.6
AT5G39770 Arabidopsis thaliana HOM05D004944 ORTHO05D005989 2.2e-27 125.9 150 45.3
AUR62026814 Chenopodium quinoa HOM05D004944 ORTHO05D005989 3.8e-27 125.2 158 43.0
ATR0721G036 Amborella trichopoda HOM05D004944 ORTHO05D005989 5.0e-27 124.8 146 47.3
HPP92_001442 Vanilla planifolia HOM05D004944 ORTHO05D005989 8.5e-27 124.0 147 46.3
AUR62037239 Chenopodium quinoa HOM05D004944 ORTHO05D005989 1.1e-26 123.6 157 43.9
HPP92_001459 Vanilla planifolia HOM05D004944 ORTHO05D005989 1.4e-26 123.2 146 46.6
Prupe.2G032400 Prunus persica HOM05D004944 ORTHO05D005989 3.9e-24 115.2 149 44.3
AUR62002442 Chenopodium quinoa HOM05D004944 ORTHO05D005989 1.7e-22 109.8 162 38.3
COL.COLO4_25841 Corchorus olitorius HOM05D004944 ORTHO05D005989 1.7e-22 109.8 75 68.0
CDE01G0132 Ceratophyllum demersum HOM05D004944 ORTHO05D005989 8.2e-22 107.5 82 59.8
SEGI_11905 Sequoiadendron giganteum HOM05D004944 ORTHO05D005989 5.9e-20 101.3 150 38.7
Phvul.005G033000 Phaseolus vulgaris HOM05D004944 ORTHO05D005989 1.7e-19 99.8 146 44.5
Prupe.2G028500 Prunus persica HOM05D004944 ORTHO05D005989 2.5e-18 95.9 146 41.8
Zm00001eb141350 Zea mays HOM05D004944 ORTHO05D005989 3.9e-16 88.6 144 41.0
AagrBONN_evm.TU.Sc2ySwM_228.3522 Anthoceros agrestis HOM05D004944 ORTHO05D005989 8.8e-16 87.4 147 32.7
Pp3c16_12330 Physcomitrium patens HOM05D004944 ORTHO05D005989 1.5e-15 86.7 145 35.9
Mapoly0005s0161 Marchantia polymorpha HOM05D004944 ORTHO05D005989 9.7e-15 84.0 160 31.9
MBI17_g24522_MAGBIO Magnolia biondii HOM05D004944 ORTHO05D005989 2.4e-13 79.3 69 53.6
SMO337G0105 Selaginella moellendorffii HOM05D004944 ORTHO05D005989 4.1e-13 78.6 147 34.0
Oeu006103.1 Olea europaea HOM05D004944 ORTHO05D005989 3.8e-11 72.0 146 32.9
CBR_g44528 Chara braunii HOM05D004944 ORTHO05D005989 2.6e-07 59.3 160 25.6


User provided reference genes

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