Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0000006 Camellia sinensis var. sinensis HOM05D005235 ORTHO05D006938 2.2e-280 968.4 520 100.0
CSS0008907 Camellia sinensis var. sinensis HOM05D005235 ORTHO05D006938 2.2e-280 968.4 520 100.0
vmacro22930 Vaccinium macrocarpon HOM05D005235 ORTHO05D006938 4.3e-207 724.9 487 76.8
Rhsim08G0037300 Rhododendron simsii HOM05D005235 ORTHO05D006938 7.3e-207 724.2 438 82.6
Dinv25083 Davidia involucrata HOM05D005235 ORTHO05D006938 3.5e-201 705.3 471 77.1
Actinidia37705 Actinidia chinensis HOM05D005235 ORTHO05D006938 1.1e-197 693.7 432 82.4
TAR626G0946 Trochodendron aralioides HOM05D005235 ORTHO05D006938 5.8e-196 688.0 499 73.1
Duzib213G0463 Durio zibethinus HOM05D005235 ORTHO05D006938 9.3e-194 680.6 490 72.0
COL.COLO4_17457 Corchorus olitorius HOM05D005235 ORTHO05D000503 1.7e-192 676.4 449 75.7
Oeu061455.1 Olea europaea HOM05D005235 ORTHO05D006938 1.7e-192 676.4 449 77.5
Gohir.D01G037300 Gossypium hirsutum HOM05D005235 ORTHO05D006938 3.9e-192 675.2 491 71.9
Nn6g33287 Nelumbo nucifera HOM05D005235 ORTHO05D006938 2.5e-191 672.5 464 74.6
Gohir.A01G046600 Gossypium hirsutum HOM05D005235 ORTHO05D006938 3.3e-191 672.2 489 71.4
Gorai.002G045400 Gossypium raimondii HOM05D005235 ORTHO05D006938 9.6e-191 670.6 491 71.7
Cc03_g16140 Coffea canephora HOM05D005235 ORTHO05D006938 1.3e-190 670.2 435 77.7
Thecc.07G135900 Theobroma cacao HOM05D005235 ORTHO05D006938 1.3e-190 670.2 485 71.8
Aqoxy1G00862 Aquilegia oxysepala HOM05D005235 ORTHO05D006938 1.6e-190 669.8 461 74.6
Manes.04G096400 Manihot esculenta HOM05D005235 ORTHO05D006938 1.2e-188 663.7 463 72.8
MD15G1428200 Malus domestica HOM05D005235 ORTHO05D006938 2.6e-188 662.5 434 75.3
RcHm_v2.0_Chr7g0221241 Rosa chinensis HOM05D005235 ORTHO05D006938 3.4e-188 662.1 467 71.1
Prupe.1G572900 Prunus persica HOM05D005235 ORTHO05D006938 1.3e-187 660.2 433 75.3
FvH4_6g39550 Fragaria vesca HOM05D005235 ORTHO05D006938 1.7e-187 659.8 434 74.9
AL3G12040 Arabidopsis lyrata HOM05D005235 ORTHO05D006938 2.2e-187 659.4 472 71.8
Eucgr.I01565 Eucalyptus grandis HOM05D005235 ORTHO05D006938 2.2e-187 659.4 440 76.6
MD08G1236200 Malus domestica HOM05D005235 ORTHO05D006938 2.9e-187 659.1 434 74.9
CARHR076660 Cardamine hirsuta HOM05D005235 ORTHO05D006938 3.8e-187 658.7 472 71.2
BNapus_Darmor_BZH_scaffold_122p00160 Brassica napus HOM05D005235 ORTHO05D006938 8.4e-187 657.5 451 72.7
PGR142G4255 Punica granatum HOM05D005235 ORTHO05D006938 8.4e-187 657.5 434 77.4
AT3G02660 Arabidopsis thaliana HOM05D005235 ORTHO05D006938 1.1e-186 657.1 465 71.8
BNapus_Darmor_BZH_scaffold_99p00190 Brassica napus HOM05D005235 ORTHO05D006938 1.1e-186 657.1 451 72.3
CANSAT21G0039 Cannabis sativa HOM05D005235 ORTHO05D006938 3.2e-186 655.6 440 77.0
BraA01t04625Z Brassica rapa HOM05D005235 ORTHO05D006938 7.1e-186 654.4 451 72.5
A03p33070 Brassica napus HOM05D005235 ORTHO05D006938 3.5e-185 652.1 451 72.7
Potri.014G140400 Populus trichocarpa HOM05D005235 ORTHO05D006938 3.5e-185 652.1 459 72.1
Sabra14G0105800 Salix brachista HOM05D005235 ORTHO05D006938 4.6e-185 651.7 459 71.7
SalBow4G1042 Salvia bowleyana HOM05D005235 ORTHO05D006938 4.6e-185 651.7 435 76.1
FvH4_5g28930 Fragaria vesca HOM05D005235 ORTHO05D006938 6.0e-185 651.4 434 74.0
Aa31LG5G13140 Aethionema arabicum HOM05D005235 ORTHO05D006938 1.0e-184 650.6 501 66.1
BraA03t12477Z Brassica rapa HOM05D005235 ORTHO05D006938 1.0e-184 650.6 451 72.5
ClCG07G017190 Citrullus lanatus HOM05D005235 ORTHO05D006938 1.7e-184 649.8 471 71.8
Lalb_Chr15g0085971 Lupinus albus HOM05D005235 ORTHO05D006938 1.7e-184 649.8 480 70.0
BcaC01g04429 Brassica carinata HOM05D005235 ORTHO05D006938 5.1e-184 648.3 451 71.8
BolC3t16290H Brassica oleracea HOM05D005235 ORTHO05D006938 5.1e-184 648.3 451 71.8
BolC1t05885H Brassica oleracea HOM05D005235 ORTHO05D006938 1.1e-183 647.1 439 72.7
Haze_25416 Corylus avellana HOM05D005235 ORTHO05D006938 1.5e-183 646.7 441 74.8
MELO3C017627.2 Cucumis melo HOM05D005235 ORTHO05D006938 2.5e-183 646.0 436 74.1
FAN13G2026 Fragaria x ananassa HOM05D005235 ORTHO05D006938 2.5e-183 646.0 480 68.1
TPR.G24949 Trifolium pratense HOM05D005235 ORTHO05D006938 2.5e-183 646.0 443 73.1
CsaV3_4G004390 Cucumis sativus L. HOM05D005235 ORTHO05D006938 3.3e-183 645.6 436 74.5
PSO566G0178 Papaver somniferum HOM05D005235 ORTHO05D006938 3.3e-183 645.6 454 71.6
Solyc07g008530.1 Solanum lycopersicum HOM05D005235 ORTHO05D006938 3.3e-183 645.6 446 73.1
CiPaw.03G253600 Carya illinoinensis HOM05D005235 ORTHO05D006938 4.3e-183 645.2 439 74.9
Medtr4g121070 Medicago truncatula HOM05D005235 ORTHO05D006938 4.3e-183 645.2 455 71.6
Lj6g0011193 Lotus japonicus HOM05D005235 ORTHO05D006938 5.6e-183 644.8 447 73.2
Sopen07g004450 Solanum pennellii HOM05D005235 ORTHO05D006938 7.3e-183 644.4 446 72.9
Sc01g0007490 Simmondsia chinensis HOM05D005235 ORTHO05D006938 9.6e-183 644.0 435 74.5
arahy.Tifrunner.gnm1.ann1.0Z73T7 Arachis hypogaea HOM05D005235 ORTHO05D006938 1.3e-182 643.7 451 72.1
Lsat_1_v5_gn_6_15261 Lactuca sativa HOM05D005235 ORTHO05D006938 1.6e-182 643.3 487 68.8
PSO173G0108 Papaver somniferum HOM05D005235 ORTHO05D006938 1.6e-182 643.3 455 71.2
Sp3g01700 Schrenkiella parvula HOM05D005235 ORTHO05D006938 2.1e-182 642.9 465 69.0
Thhalv10020578m.g Eutrema salsugineum HOM05D005235 ORTHO05D006938 3.6e-182 642.1 437 71.9
Peaxi162Scf01038g00005 Petunia axillaris HOM05D005235 ORTHO05D006938 3.6e-182 642.1 446 72.2
THA.LOC104820931 Tarenaya hassleriana HOM05D005235 ORTHO05D006938 3.6e-182 642.1 443 71.3
Medtr3g466250 Medicago truncatula HOM05D005235 ORTHO05D006938 6.2e-182 641.3 459 71.0
TWI32G1353 Tripterygium wilfordii HOM05D005235 ORTHO05D006938 8.1e-182 641.0 447 71.8
Ciclev10015023m.g Citrus clementina HOM05D005235 ORTHO05D006938 1.1e-181 640.6 452 71.9
Glyma.14G202100 Glycine max HOM05D005235 ORTHO05D006938 1.1e-181 640.6 437 74.6
Cfa002235 Carpinus fangiana HOM05D005235 ORTHO05D006938 1.8e-181 639.8 441 73.9
Psat5g150600 Pisum sativum HOM05D005235 ORTHO05D006938 1.8e-181 639.8 439 72.7
Ca_15026_v3 Cicer arietinum L. HOM05D005235 ORTHO05D006938 2.4e-181 639.4 444 73.0
arahy.Tifrunner.gnm1.ann1.354T1Y Arachis hypogaea HOM05D005235 ORTHO05D006938 4.0e-181 638.6 500 66.6
Migut.N01688 Erythranthe guttata HOM05D005235 ORTHO05D006938 5.3e-181 638.3 437 74.8
PGSC0003DMG400022992 Solanum tuberosum HOM05D005235 ORTHO05D006938 6.9e-181 637.9 505 66.7
FAN18G1214 Fragaria x ananassa HOM05D005235 ORTHO05D006938 9.0e-181 637.5 488 66.8
Sed0026739 Sechium edule HOM05D005235 ORTHO05D006938 9.0e-181 637.5 453 71.7
Ah.08g210620 Amaranthus hybridus HOM05D005235 ORTHO05D006938 1.5e-180 636.7 434 74.0
AUR62033498 Chenopodium quinoa HOM05D005235 ORTHO05D006938 1.5e-180 636.7 492 68.3
Lj3g0002085 Lotus japonicus HOM05D005235 ORTHO05D006938 1.5e-180 636.7 449 73.1
Phvul.008G249300 Phaseolus vulgaris HOM05D005235 ORTHO05D006938 2.6e-180 636.0 435 72.4
Hund00893 Selenicereus undatus HOM05D005235 ORTHO05D006938 3.4e-180 635.6 433 73.4
Atru.BG.29.p Acer truncatum HOM05D005235 ORTHO05D006938 4.5e-180 635.2 432 74.5
EL10Ac7g16931 Beta vulgaris HOM05D005235 ORTHO05D006938 5.8e-180 634.8 432 73.6
HanXRQChr08g0226751 Helianthus annuus HOM05D005235 ORTHO05D006938 7.6e-180 634.4 436 73.9
CAN.G192.3 Capsicum annuum HOM05D005235 ORTHO05D006938 1.3e-179 633.6 445 72.8
VMungo0647G1084 Vigna mungo HOM05D005235 ORTHO05D006938 1.7e-179 633.3 447 71.6
Migut.O00424 Erythranthe guttata HOM05D005235 ORTHO05D006938 2.2e-179 632.9 436 74.3
ECA233G3576 Erigeron canadensis HOM05D005235 ORTHO05D006938 5.4e-178 628.2 439 73.1
FAN08G3020 Fragaria x ananassa HOM05D005235 ORTHO05D006938 5.4e-178 628.2 494 66.2
Nitab4.5_0000491g0060 Nicotiana tabacum HOM05D005235 ORTHO05D006938 9.3e-178 627.5 442 70.8
Nitab4.5_0000949g0050 Nicotiana tabacum HOM05D005235 ORTHO05D006938 9.3e-178 627.5 441 71.2
AUR62028546 Chenopodium quinoa HOM05D005235 ORTHO05D006938 1.2e-177 627.1 434 72.4
unitig_22.g5329 Utricularia gibba HOM05D005235 ORTHO05D006938 6.0e-177 624.8 435 74.7
Glyma.02G234500 Glycine max HOM05D005235 ORTHO05D006938 1.0e-176 624.0 445 72.1
QL10p019537 Quercus lobata HOM05D005235 ORTHO05D006938 1.8e-176 623.2 431 73.1
MBI04_g19169_MAGBIO Magnolia biondii HOM05D005235 ORTHO05D006938 3.0e-176 622.5 518 64.3
SGA_v2.0_scaffold68G22803 Striga asiatica HOM05D005235 ORTHO05D006938 2.5e-175 619.4 445 73.5
DCAR_005998 Daucus carota HOM05D005235 ORTHO05D006938 4.3e-175 618.6 480 66.7
Lj8A333T11 Lonicera japonica HOM05D005235 ORTHO05D006938 7.4e-175 617.8 491 66.8
ATR0021G047 Amborella trichopoda HOM05D005235 ORTHO05D006938 9.6e-175 617.5 435 70.6
CDE05G0570 Ceratophyllum demersum HOM05D005235 ORTHO05D006938 9.6e-175 617.5 441 70.1
CDE05G2156 Ceratophyllum demersum HOM05D005235 ORTHO05D006938 9.6e-175 617.5 445 69.9
Os01g0500900 Oryza sativa ssp. japonica HOM05D005235 ORTHO05D006938 3.1e-173 612.5 464 67.9
Zm00001eb080850 Zea mays HOM05D005235 ORTHO05D006938 4.6e-169 598.6 454 67.6
AagrBONN_evm.TU.Sc2ySwM_368.429 Anthoceros agrestis HOM05D005235 ORTHO05D006938 7.1e-162 574.7 450 63.3
Pp3c3_3070 Physcomitrium patens HOM05D005235 ORTHO05D006938 7.1e-162 574.7 432 66.2
Nitab4.5_0004867g0070 Nicotiana tabacum HOM05D000907 ORTHO05D000753 1.3e-160 570.5 441 67.8
BcaB04g19392 Brassica carinata HOM05D005235 ORTHO05D006938 6.9e-157 558.1 439 64.7
Mapoly0163s0012 Marchantia polymorpha HOM05D005235 ORTHO05D006938 2.6e-156 556.2 439 62.4
SMO200G0177 Selaginella moellendorffii HOM05D005235 ORTHO05D006938 7.4e-151 538.1 435 61.4
MCO13G625 Micromonas commoda HOM05D005235 ORTHO05D006938 3.3e-143 512.7 452 56.9
SEGI_38902 Sequoiadendron giganteum HOM05D005235 ORTHO05D006938 1.7e-142 510.4 376 68.9
Cre13.g606050 Chlamydomonas reinhardtii HOM05D005235 ORTHO05D006938 3.1e-141 506.1 436 59.2
TAR633G2758 Trochodendron aralioides HOM05D005235 ORTHO05D006938 4.5e-140 502.3 314 81.8
FAN05G2159 Fragaria x ananassa HOM05D005235 ORTHO05D006938 2.7e-137 493.0 430 59.8
GSVIVG01023528001 Vitis vinifera HOM05D005235 ORTHO05D006938 5.2e-136 488.8 452 59.5
PRCOL_00003633 Prasinoderma coloniale HOM05D005235 ORTHO05D006938 7.2e-130 468.4 500 50.0
Actinidia19541 Actinidia chinensis HOM05D005235 ORTHO05D006938 5.2e-128 462.2 450 60.4
CBR_g10848 Chara braunii HOM05D005235 ORTHO05D006938 2.6e-127 459.9 480 50.8
arahy.Tifrunner.gnm1.ann1.M0UG3B Arachis hypogaea HOM05D005235 ORTHO05D006938 4.1e-125 452.6 452 57.1
arahy.Tifrunner.gnm1.ann1.8HX8KM Arachis hypogaea HOM05D005235 ORTHO05D006938 3.6e-121 439.5 429 56.4
FAN04G0607 Fragaria x ananassa HOM05D005235 ORTHO05D006938 1.5e-95 354.4 235 75.7
Dinv11903 Davidia involucrata HOM05D005235 ORTHO05D006938 7.6e-87 325.5 394 51.5
BolC1t05886H Brassica oleracea HOM05D005235 ORTHO05D006938 4.6e-84 316.2 400 47.0
HPP92_015556 Vanilla planifolia HOM05D005235 ORTHO05D006938 6.8e-80 302.4 226 65.0
Pp3s58_130 Physcomitrium patens HOM05D005235 ORTHO05D006938 3.4e-79 300.1 432 38.9
C03p40250 Brassica napus HOM05D005235 ORTHO05D006938 1.4e-77 294.7 205 71.2
BNapus_Darmor_BZH_scaffold_133p00140 Brassica napus HOM05D005235 ORTHO05D032674 1.3e-65 255.0 235 60.9
HPP92_015557 Vanilla planifolia HOM05D005235 ORTHO05D006938 1.2e-63 248.4 174 73.6
Cfa027221 Carpinus fangiana HOM05D004159 ORTHO05D006938 2.0e-63 247.7 461 33.4
BcaC09g47648 Brassica carinata HOM05D005235 ORTHO05D032674 1.1e-58 231.9 340 45.3
Haze_27256 Corylus avellana HOM05D005235 ORTHO05D006938 4.8e-57 226.5 433 33.7
FAN04G0381 Fragaria x ananassa HOM05D005235 ORTHO05D006938 4.5e-55 219.9 158 67.1
Oeu046079.2 Olea europaea HOM05D002040 ORTHO05D002502 7.1e-53 212.6 406 37.7
CDE05G3313 Ceratophyllum demersum HOM05D005235 ORTHO05D006938 1.8e-40 171.4 127 63.8
BraA01t04657Z Brassica rapa HOM05D005235 ORTHO05D032674 1.8e-35 154.8 134 62.7
FAN09G2876 Fragaria x ananassa HOM05D005235 ORTHO05D006938 3.2e-29 134.0 96 66.7
Oeu059313.1 Olea europaea HOM05D005235 ORTHO05D006938 1.7e-25 121.7 137 52.6
TAR633G1966 Trochodendron aralioides HOM05D005235 ORTHO05D006938 2.4e-24 117.9 100 63.0
Thecc.07G136200 Theobroma cacao HOM05D005235 ORTHO05D006938 5.3e-24 116.7 130 54.6
SEGI_05348 Sequoiadendron giganteum HOM05D005235 ORTHO05D006938 4.2e-21 107.1 68 76.5
SEGI_33043 Sequoiadendron giganteum HOM05D005235 ORTHO05D008256 2.4e-16 91.3 70 58.6
Oeu038380.1 Olea europaea HOM05D007843 ORTHO05D003639 1.3e-14 85.5 102 47.1
arahy.Tifrunner.gnm1.ann1.J19R9Y Arachis hypogaea HOM05D005235 ORTHO05D038945 5.0e-14 83.6 56 71.4
Nn1g04561 Nelumbo nucifera HOM05D005235 ORTHO05D038945 5.0e-14 83.6 74 62.2
BNapus_Darmor_BZH_scaffold_119p00120 Brassica napus HOM05D005235 ORTHO05D006938 7.2e-13 79.7 49 75.5
BNapus_Darmor_BZH_scaffold_97p00310 Brassica napus HOM05D005235 ORTHO05D006938 7.2e-13 79.7 49 75.5
BolC1t05887H Brassica oleracea HOM05D005235 ORTHO05D014124 2.2e-09 68.2 73 57.5


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