Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0008489 Camellia sinensis var. sinensis HOM05D006551 ORTHO05D008546 2.3e-142 508.8 243 100.0
CSS0047745 Camellia sinensis var. sinensis HOM05D006551 ORTHO05D008546 4.2e-141 504.6 243 99.2
Dinv15335 Davidia involucrata HOM05D006551 ORTHO05D008546 2.0e-122 442.6 243 86.8
TAR629G1611 Trochodendron aralioides HOM05D006551 ORTHO05D008546 4.0e-107 391.7 226 79.2
Prupe.4G003400 Prunus persica HOM05D006551 ORTHO05D008546 1.7e-105 386.3 244 75.4
TWI38G1730 Tripterygium wilfordii HOM05D006551 ORTHO05D008546 1.9e-104 382.9 233 76.4
Thecc.06G241400 Theobroma cacao HOM05D006551 ORTHO05D008546 6.0e-103 377.9 239 74.9
Cfa000032 Carpinus fangiana HOM05D006551 ORTHO05D008546 2.3e-102 375.9 249 73.9
CiPaw.10G082200 Carya illinoinensis HOM05D006551 ORTHO05D008546 5.1e-102 374.8 245 73.5
FvH4_3g00300 Fragaria vesca HOM05D006551 ORTHO05D008546 6.6e-102 374.4 241 74.3
Manes.09G083300 Manihot esculenta HOM05D006551 ORTHO05D008546 8.7e-102 374.0 237 74.7
Medtr2g027110 Medicago truncatula HOM05D006551 ORTHO05D008546 1.9e-101 372.9 234 76.1
Duzib160G0007 Durio zibethinus HOM05D006551 ORTHO05D008546 3.3e-101 372.1 229 76.4
Sc17g0008010 Simmondsia chinensis HOM05D006551 ORTHO05D008546 1.6e-100 369.8 224 76.3
RcHm_v2.0_Chr5g0000451 Rosa chinensis HOM05D006551 ORTHO05D008546 4.7e-100 368.2 234 74.8
TPR.G17557 Trifolium pratense HOM05D006551 ORTHO05D008546 4.7e-100 368.2 230 76.5
Potri.006G004500 Populus trichocarpa HOM05D006551 ORTHO05D008546 6.2e-100 367.9 230 73.5
QL05p067740 Quercus lobata HOM05D006551 ORTHO05D008546 6.2e-100 367.9 248 71.8
Phvul.006G137400 Phaseolus vulgaris HOM05D006551 ORTHO05D008546 8.1e-100 367.5 226 75.2
Ciclev10016440m.g Citrus clementina HOM05D006551 ORTHO05D008546 1.1e-99 367.1 237 71.7
Lalb_Chr20g0119561 Lupinus albus HOM05D006551 ORTHO05D008546 1.1e-99 367.1 226 76.5
Ca_00765_v3 Cicer arietinum L. HOM05D006551 ORTHO05D008546 2.4e-99 365.9 229 77.3
Sopen04g007100 Solanum pennellii HOM05D006551 ORTHO05D008546 2.4e-99 365.9 219 76.3
Glyma.09G014800 Glycine max HOM05D006551 ORTHO05D008546 3.1e-99 365.5 227 75.8
MD10G1339500 Malus domestica HOM05D006551 ORTHO05D008546 3.1e-99 365.5 240 74.6
Phvul.006G137611 Phaseolus vulgaris HOM05D006551 ORTHO05D008546 3.1e-99 365.5 226 75.2
Lj6g0027493 Lotus japonicus HOM05D006551 ORTHO05D008546 6.9e-99 364.4 226 75.7
Sabra06G0003800 Salix brachista HOM05D006551 ORTHO05D008546 1.2e-98 363.6 230 73.0
Atru.chr1.1073 Acer truncatum HOM05D006551 ORTHO05D008546 7.6e-98 360.9 219 77.6
PGSC0003DMG400015008 Solanum tuberosum HOM05D006551 ORTHO05D008546 1.3e-97 360.1 219 74.4
Hma1.2p1_1175F.1_g264070 Hydrangea macrophylla HOM05D006551 ORTHO05D008546 1.7e-97 359.8 236 74.6
Aa31LG2G12400 Aethionema arabicum HOM05D006551 ORTHO05D008546 1.2e-95 353.6 243 69.5
Lj1C1247T0 Lonicera japonica HOM05D006551 ORTHO05D008546 2.1e-95 352.8 222 76.1
COL.COLO4_31943 Corchorus olitorius HOM05D000879 ORTHO05D002864 1.3e-94 350.1 215 74.9
VMungo0540G0952 Vigna mungo HOM05D006551 ORTHO05D008546 1.7e-94 349.7 229 72.1
MSTRG.7126 Avicennia marina HOM05D006551 ORTHO05D008546 2.3e-94 349.4 239 69.0
arahy.Tifrunner.gnm1.ann1.TFI8LM Arachis hypogaea HOM05D006551 ORTHO05D008546 1.1e-93 347.1 232 71.6
Gorai.011G008500 Gossypium raimondii HOM05D006551 ORTHO05D008546 1.5e-93 346.7 230 70.0
BolC8t51654H Brassica oleracea HOM05D006551 ORTHO05D008546 4.3e-93 345.1 240 69.2
A09p57680 Brassica napus HOM05D006551 ORTHO05D008546 5.6e-93 344.7 222 72.5
SalBow8G1397 Salvia bowleyana HOM05D006551 ORTHO05D008546 5.6e-93 344.7 242 66.9
SalBow8G2449 Salvia bowleyana HOM05D006551 ORTHO05D008546 5.6e-93 344.7 242 66.9
AL4G11740 Arabidopsis lyrata HOM05D006551 ORTHO05D008546 7.3e-93 344.4 228 69.3
Gohir.A10G007900 Gossypium hirsutum HOM05D006551 ORTHO05D008546 7.3e-93 344.4 230 69.6
BcaC07g41084 Brassica carinata HOM05D006551 ORTHO05D008546 9.6e-93 344.0 222 73.4
BcaC07g41085 Brassica carinata HOM05D006551 ORTHO05D008546 9.6e-93 344.0 222 73.4
C08p40880 Brassica napus HOM05D006551 ORTHO05D008546 9.6e-93 344.0 222 73.4
Carub.0004s0140 Capsella rubella HOM05D006551 ORTHO05D008546 9.6e-93 344.0 229 69.9
Lsat_1_v5_gn_7_12961 Lactuca sativa HOM05D006551 ORTHO05D008546 1.3e-92 343.6 235 69.4
arahy.Tifrunner.gnm1.ann1.HFV92P Arachis hypogaea HOM05D006551 ORTHO05D008546 1.6e-92 343.2 232 70.7
Aqoxy1G04265 Aquilegia oxysepala HOM05D006551 ORTHO05D008546 2.1e-92 342.8 223 71.7
MELO3C008006.2 Cucumis melo HOM05D006551 ORTHO05D008546 2.8e-92 342.4 235 67.7
BraA09t41161Z Brassica rapa HOM05D006551 ORTHO05D008546 3.6e-92 342.0 233 69.5
Migut.M01446 Erythranthe guttata HOM05D006551 ORTHO05D008546 6.2e-92 341.3 253 68.4
Eucgr.L00150 Eucalyptus grandis HOM05D006551 ORTHO05D008546 6.2e-92 341.3 202 77.2
Nitab4.5_0000147g0330 Nicotiana tabacum HOM05D006551 ORTHO05D008546 1.4e-91 340.1 208 73.1
THA.LOC104815473 Tarenaya hassleriana HOM05D006551 ORTHO05D008546 1.4e-91 340.1 243 67.9
CAN.G1263.6 Capsicum annuum HOM05D006551 ORTHO05D008546 1.8e-91 339.7 205 74.6
PSO210G1263 Papaver somniferum HOM05D006551 ORTHO05D008546 4.0e-91 338.6 232 68.5
AT2G22260 Arabidopsis thaliana HOM05D006551 ORTHO05D008546 5.3e-91 338.2 229 68.1
Gohir.D10G007800 Gossypium hirsutum HOM05D006551 ORTHO05D008546 1.5e-90 336.7 223 69.1
Cc09_g00290 Coffea canephora HOM05D006551 ORTHO05D008546 2.6e-90 335.9 216 72.2
Peaxi162Scf00811g00222 Petunia axillaris HOM05D006551 ORTHO05D008546 5.8e-90 334.7 231 66.7
SGA_v2.0_scaffold7G03692 Striga asiatica HOM05D006551 ORTHO05D008546 1.7e-89 333.2 208 73.1
CsaV3_6G048230 Cucumis sativus L. HOM05D006551 ORTHO05D008546 2.2e-89 332.8 235 66.4
PSO210G0886 Papaver somniferum HOM05D006551 ORTHO05D008546 2.9e-89 332.4 242 64.0
Eucgr.E03850 Eucalyptus grandis HOM05D006551 ORTHO05D008546 1.9e-88 329.7 244 65.2
ClCG01G021210 Citrullus lanatus HOM05D006551 ORTHO05D008546 1.6e-87 326.6 235 65.5
ECA248G0604 Erigeron canadensis HOM05D006551 ORTHO05D008546 2.7e-87 325.9 227 67.8
Ah.14g087400 Amaranthus hybridus HOM05D006551 ORTHO05D008546 3.5e-87 325.5 228 66.7
HPP92_018202 Vanilla planifolia HOM05D006551 ORTHO05D008546 4.6e-87 325.1 240 64.6
EL10Ac8g20269 Beta vulgaris HOM05D006551 ORTHO05D008546 1.0e-86 323.9 224 68.8
DCAR_002245 Daucus carota HOM05D006551 ORTHO05D008546 5.1e-86 321.6 240 63.8
Hund08692 Selenicereus undatus HOM05D006551 ORTHO05D008546 6.7e-86 321.2 250 62.4
PGR042G3561 Punica granatum HOM05D006551 ORTHO05D008546 1.5e-85 320.1 217 68.2
Sed0011139 Sechium edule HOM05D006551 ORTHO05D008546 1.9e-85 319.7 243 63.8
CARHR113490 Cardamine hirsuta HOM05D006551 ORTHO05D008546 2.5e-85 319.3 219 68.5
Nitab4.5_0006294g0080 Nicotiana tabacum HOM05D006551 ORTHO05D008546 4.3e-85 318.5 244 62.7
HanXRQChr05g0129031 Helianthus annuus HOM05D006551 ORTHO05D008546 2.8e-84 315.8 225 68.9
unitig_37.g12177 Utricularia gibba HOM05D006551 ORTHO05D008546 1.1e-83 313.9 245 62.9
vmacro03605 Vaccinium macrocarpon HOM05D006551 ORTHO05D008546 1.8e-83 313.2 171 88.3
Zm00001eb380830 Zea mays HOM05D006551 ORTHO05D008546 2.2e-81 306.2 230 64.3
Cpa.g.sc27.224 Carica papaya HOM05D006551 ORTHO05D008546 2.9e-81 305.8 246 62.2
Oeu025969.1 Olea europaea HOM05D006551 ORTHO05D008546 2.5e-80 302.8 217 66.4
AUR62021809 Chenopodium quinoa HOM05D006551 ORTHO05D008546 5.5e-80 301.6 222 64.0
Rhsim13G0140300 Rhododendron simsii HOM05D006551 ORTHO05D008546 2.3e-78 296.2 175 79.4
Psat1g172360 Pisum sativum HOM05D006551 ORTHO05D008546 2.5e-77 292.7 170 81.8
Hma1.2p1_1175F.1_g264060 Hydrangea macrophylla HOM05D006551 ORTHO05D008546 3.3e-77 292.4 180 77.8
Nn1g07524 Nelumbo nucifera HOM05D006551 ORTHO05D008546 1.3e-76 290.4 183 74.3
BcaB08g35054 Brassica carinata HOM05D006551 ORTHO05D008546 3.1e-75 285.8 200 67.5
Haze_07021 Corylus avellana HOM05D006551 ORTHO05D008546 1.0e-73 280.8 244 61.5
PGR004G0828 Punica granatum HOM05D006551 ORTHO05D008546 2.5e-72 276.2 179 70.9
Solyc04g015080.4 Solanum lycopersicum HOM05D006551 ORTHO05D008546 3.2e-72 275.8 153 79.1
SpUn1059_0010 Schrenkiella parvula HOM05D006551 ORTHO05D008546 1.3e-68 263.8 169 74.0
Eucgr.E03848 Eucalyptus grandis HOM05D006551 ORTHO05D008546 3.8e-65 252.3 178 65.7
ATR0751G145 Amborella trichopoda HOM05D006551 ORTHO05D008546 2.5e-61 239.6 166 68.1
AUR62012856 Chenopodium quinoa HOM05D006551 ORTHO05D008546 1.4e-59 233.8 170 65.3
AagrBONN_evm.TU.Sc2ySwM_362.1805 Anthoceros agrestis HOM05D006551 ORTHO05D008546 3.0e-54 216.1 290 40.3
Peaxi162Scf00827g00057 Petunia axillaris HOM05D006551 ORTHO05D008546 4.1e-51 205.7 163 63.2
SEGI_23146 Sequoiadendron giganteum HOM05D006551 ORTHO05D008546 2.5e-48 196.4 225 46.2
AagrBONN_evm.TU.Sc2ySwM_369.541 Anthoceros agrestis HOM05D006551 ORTHO05D008546 1.3e-44 184.1 242 40.1
SHI31451 Sapria himalayana HOM05D006551 ORTHO05D008546 1.3e-41 174.1 114 74.6
Psat2g019160 Pisum sativum HOM05D006551 ORTHO05D008546 1.6e-39 167.2 98 75.5
CBR_g3891 Chara braunii HOM05D006551 ORTHO05D008546 1.6e-34 150.6 136 49.3
SHI31456 Sapria himalayana HOM05D006551 ORTHO05D008546 1.6e-34 150.6 113 60.2
Glyma.15G120500 Glycine max HOM05D006551 ORTHO05D008546 3.5e-34 149.4 113 68.1
Sed0010073 Sechium edule HOM05D006551 ORTHO05D008546 1.9e-32 143.7 188 41.0
Hma1.2p1_1322F.1_g275500 Hydrangea macrophylla HOM05D006551 ORTHO05D008546 6.3e-20 102.1 69 75.4
VMungo0540G1474 Vigna mungo HOM05D006551 ORTHO05D008546 5.6e-16 89.0 61 73.8
Sp4g01310 Schrenkiella parvula HOM05D006551 ORTHO05D008546 2.1e-15 87.0 59 57.6
Solyc12g056880.2 Solanum lycopersicum HOM05D006551 ORTHO05D008546 2.8e-15 86.7 96 52.1
VMungo0540G1416 Vigna mungo HOM05D000555 ORTHO05D001906 6.1e-15 85.5 60 63.3
Os06g0286310 Oryza sativa ssp. japonica HOM05D006551 ORTHO05D008546 1.8e-14 84.0 65 56.9
Cfa024106 Carpinus fangiana HOM05D006551 ORTHO05D008546 1.2e-13 81.3 119 38.7
Pp3c2_11520 Physcomitrium patens HOM05D006551 ORTHO05D008546 7.5e-13 78.6 168 32.1
PRCOL_00002494 Prasinoderma coloniale HOM05D006551 ORTHO05D008546 9.2e-11 71.6 119 35.3
HanXRQChr17g0567191 Helianthus annuus HOM05D000289 ORTHO05D000208 5.0e-09 65.9 52 55.8
Psat1g141560 Pisum sativum HOM05D006551 ORTHO05D008546 3.1e-06 56.6 41 63.4


User provided reference genes

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