Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0007323 Camellia sinensis var. sinensis HOM05D005515 ORTHO05D006620 1.5e-56 222.6 112 100.0
CiPaw.04G036400 Carya illinoinensis HOM05D005515 ORTHO05D006620 1.2e-45 186.4 110 85.5
AUR62017824 Chenopodium quinoa HOM05D005515 ORTHO05D006620 1.3e-44 183.0 110 81.8
Dinv25661 Davidia involucrata HOM05D005515 ORTHO05D006620 5.5e-43 177.6 110 83.6
EL10Ac6g15358 Beta vulgaris HOM05D005515 ORTHO05D006620 2.7e-42 175.3 110 77.3
Haze_14873 Corylus avellana HOM05D005515 ORTHO05D006620 7.9e-42 173.7 110 79.1
Actinidia05921 Actinidia chinensis HOM05D005515 ORTHO05D006620 1.3e-41 172.9 112 79.5
Zm00001eb364510 Zea mays HOM05D005515 ORTHO05D006620 9.7e-40 166.8 108 73.1
Psat3g175680 Pisum sativum HOM05D005515 ORTHO05D006620 2.2e-39 165.6 110 70.9
TPR.G38294 Trifolium pratense HOM05D005515 ORTHO05D006620 2.2e-39 165.6 110 70.9
Medtr7g033490 Medicago truncatula HOM05D005515 ORTHO05D006620 3.7e-39 164.9 109 72.5
MD09G1011100 Malus domestica HOM05D005515 ORTHO05D006620 9.1e-38 160.2 107 75.7
Rhsim10G0006500 Rhododendron simsii HOM05D005515 ORTHO05D006620 2.2e-36 155.6 111 72.1
Eucgr.I01648 Eucalyptus grandis HOM05D005515 ORTHO05D006620 1.9e-35 152.5 108 72.2
Sed0013471 Sechium edule HOM05D005515 ORTHO05D006620 2.5e-35 152.1 109 67.9
Sc07g0003980 Simmondsia chinensis HOM05D005515 ORTHO05D006620 2.5e-35 152.1 110 73.6
Zm00001eb143260 Zea mays HOM05D005515 ORTHO05D006620 2.5e-35 152.1 108 65.7
FvH4_6g53480 Fragaria vesca HOM05D005515 ORTHO05D006620 9.4e-35 150.2 110 70.9
Potri.001G330400 Populus trichocarpa HOM05D005515 ORTHO05D006620 2.1e-34 149.1 111 72.1
Pp3c8_2660 Physcomitrium patens HOM05D005515 ORTHO05D006620 2.7e-34 148.7 110 64.5
CANSAT11G1216 Cannabis sativa HOM05D005515 ORTHO05D006620 4.7e-34 147.9 110 69.1
CSS0037273 Camellia sinensis var. sinensis HOM05D005515 ORTHO05D006620 2.3e-33 145.6 72 98.6
Duzib268G1731 Durio zibethinus HOM05D005515 ORTHO05D006620 2.3e-33 145.6 115 67.8
MD00G1139400 Malus domestica HOM05D005515 ORTHO05D006620 1.1e-32 143.3 80 87.5
Hund04339 Selenicereus undatus HOM05D005515 ORTHO05D006620 1.1e-32 143.3 110 70.0
GSVIVG01033096001 Vitis vinifera HOM05D005515 ORTHO05D006620 2.0e-32 142.5 110 69.1
Aqoxy5G03385 Aquilegia oxysepala HOM05D005515 ORTHO05D006620 4.4e-32 141.4 110 66.4
Gohir.A05G310700 Gossypium hirsutum HOM05D005515 ORTHO05D006620 4.4e-32 141.4 96 74.0
Gorai.009G332600 Gossypium raimondii HOM05D005515 ORTHO05D006620 9.7e-32 140.2 112 66.1
Prupe.3G305900 Prunus persica HOM05D005515 ORTHO05D006620 1.3e-31 139.8 110 68.2
Aqoxy7G00951 Aquilegia oxysepala HOM05D005515 ORTHO05D006620 2.2e-31 139.0 109 66.1
Gohir.A05G338800 Gossypium hirsutum HOM05D005515 ORTHO05D006620 2.8e-31 138.7 110 63.6
HPP92_000347 Vanilla planifolia HOM05D005515 ORTHO05D006620 4.8e-31 137.9 109 65.1
Aqoxy2G02223 Aquilegia oxysepala HOM05D005515 ORTHO05D006620 6.3e-31 137.5 109 65.1
FAN02G1022 Fragaria x ananassa HOM05D005515 ORTHO05D006620 6.3e-31 137.5 110 65.5
Ciclev10017250m.g Citrus clementina HOM05D005515 ORTHO05D006620 8.2e-31 137.1 110 65.5
Solyc02g068110.4 Solanum lycopersicum HOM05D005515 ORTHO05D006620 1.1e-30 136.7 108 66.7
Nitab4.5_0003376g0030 Nicotiana tabacum HOM05D005515 ORTHO05D006620 1.8e-30 136.0 109 67.0
Nitab4.5_0008640g0020 Nicotiana tabacum HOM05D005515 ORTHO05D006620 1.8e-30 136.0 109 67.0
Peaxi162Scf00881g00228 Petunia axillaris HOM05D005515 ORTHO05D006620 1.8e-30 136.0 108 67.6
FAN09G0415 Fragaria x ananassa HOM05D005515 ORTHO05D006620 2.4e-30 135.6 109 65.1
Manes.15G160700 Manihot esculenta HOM05D005515 ORTHO05D006620 2.4e-30 135.6 110 67.3
Migut.K01462 Erythranthe guttata HOM05D005515 ORTHO05D006620 3.1e-30 135.2 113 65.5
FAN05G2195 Fragaria x ananassa HOM05D005515 ORTHO05D006620 3.1e-30 135.2 109 65.1
Gohir.D07G235400 Gossypium hirsutum HOM05D005515 ORTHO05D006620 3.1e-30 135.2 110 62.7
Os01g0920200 Oryza sativa ssp. japonica HOM05D005515 ORTHO05D006620 4.1e-30 134.8 107 60.7
Atru.chr6.2567 Acer truncatum HOM05D005515 ORTHO05D006620 9.1e-30 133.7 109 65.1
Lj1g0017105 Lotus japonicus HOM05D005515 ORTHO05D006620 9.1e-30 133.7 108 65.7
Gorai.001G271200 Gossypium raimondii HOM05D005515 ORTHO05D006620 1.2e-29 133.3 110 62.7
Gohir.A07G228200 Gossypium hirsutum HOM05D005515 ORTHO05D006620 2.0e-29 132.5 110 62.7
Potri.017G069200 Populus trichocarpa HOM05D005515 ORTHO05D006620 2.6e-29 132.1 114 63.2
TAR622G0361 Trochodendron aralioides HOM05D005515 ORTHO05D006620 2.6e-29 132.1 110 61.8
CAN.G1300.5 Capsicum annuum HOM05D005515 ORTHO05D006620 5.9e-29 131.0 109 64.2
Migut.K00729 Erythranthe guttata HOM05D005515 ORTHO05D006620 5.9e-29 131.0 111 56.8
Lalb_Chr22g0360381 Lupinus albus HOM05D005515 ORTHO05D006620 5.9e-29 131.0 108 63.0
vmacro05955 Vaccinium macrocarpon HOM05D005515 ORTHO05D006620 5.9e-29 131.0 72 87.5
Glyma.19G091000 Glycine max HOM05D005515 ORTHO05D006620 7.7e-29 130.6 108 63.9
Phvul.001G093800 Phaseolus vulgaris HOM05D005515 ORTHO05D006620 1.0e-28 130.2 111 62.2
CsaV3_6G032220 Cucumis sativus L. HOM05D005515 ORTHO05D006620 1.3e-28 129.8 110 60.0
Dinv10962 Davidia involucrata HOM05D000504 ORTHO05D006620 1.3e-28 129.8 110 62.7
TAR374G0204 Trochodendron aralioides HOM05D005515 ORTHO05D006620 1.3e-28 129.8 107 61.7
RcHm_v2.0_Chr2g0175521 Rosa chinensis HOM05D005515 ORTHO05D006620 1.7e-28 129.4 70 88.6
TWI36G0725 Tripterygium wilfordii HOM05D005515 ORTHO05D006620 1.7e-28 129.4 112 60.7
Glyma.16G056700 Glycine max HOM05D005515 ORTHO05D006620 2.2e-28 129.0 108 63.0
Thecc.04G035700 Theobroma cacao HOM05D005515 ORTHO05D006620 2.2e-28 129.0 110 62.7
QL02p071462 Quercus lobata HOM05D005515 ORTHO05D006620 2.9e-28 128.6 70 88.6
Gohir.D04G077100 Gossypium hirsutum HOM05D005515 ORTHO05D006620 3.8e-28 128.3 110 59.1
Oeu041666.1 Olea europaea HOM05D005515 ORTHO05D006620 6.5e-28 127.5 110 60.0
SEGI_35944 Sequoiadendron giganteum HOM05D005515 ORTHO05D006620 1.4e-27 126.3 110 59.1
Cc11_g16850 Coffea canephora HOM05D005515 ORTHO05D006620 1.9e-27 125.9 111 61.3
Gorai.012G087000 Gossypium raimondii HOM05D005515 ORTHO05D006620 4.2e-27 124.8 109 57.8
Sopen02g017220 Solanum pennellii HOM05D005515 ORTHO05D006620 5.5e-27 124.4 68 86.8
Duzib147G1212 Durio zibethinus HOM05D005515 ORTHO05D006620 9.4e-27 123.6 110 59.1
Duzib264G0697 Durio zibethinus HOM05D005515 ORTHO05D006620 9.4e-27 123.6 110 59.1
MSTRG.15568 Avicennia marina HOM05D005515 ORTHO05D006620 1.2e-26 123.2 115 60.9
PSO063G5856 Papaver somniferum HOM05D005515 ORTHO05D006620 1.6e-26 122.9 110 58.2
PSO782G3173 Papaver somniferum HOM05D005515 ORTHO05D006620 1.6e-26 122.9 110 58.2
arahy.Tifrunner.gnm1.ann1.W7YL8X Arachis hypogaea HOM05D005515 ORTHO05D006620 2.1e-26 122.5 112 61.6
arahy.Tifrunner.gnm1.ann1.Y4DWZG Arachis hypogaea HOM05D005515 ORTHO05D006620 2.1e-26 122.5 112 61.6
Pp3c4_1860 Physcomitrium patens HOM05D005515 ORTHO05D006620 2.1e-26 122.5 108 59.3
Lsat_1_v5_gn_8_147620 Lactuca sativa HOM05D005515 ORTHO05D006620 6.1e-26 120.9 111 56.8
Mapoly0005s0063 Marchantia polymorpha HOM05D005515 ORTHO05D006620 1.0e-25 120.2 110 57.3
VMungo1383G1573 Vigna mungo HOM05D005515 ORTHO05D006620 1.0e-25 120.2 130 53.1
AagrBONN_evm.TU.Sc2ySwM_117.47 Anthoceros agrestis HOM05D005515 ORTHO05D006620 1.8e-25 119.4 84 66.7
Atru.chr11.2315 Acer truncatum HOM05D005515 ORTHO05D006620 2.3e-25 119.0 109 58.7
Duzib187G1157 Durio zibethinus HOM05D005515 ORTHO05D006620 2.3e-25 119.0 110 59.1
Pp3c12_14240 Physcomitrium patens HOM05D005515 ORTHO05D006620 2.3e-25 119.0 108 55.6
FAN14G0031 Fragaria x ananassa HOM05D005515 ORTHO05D006620 1.1e-24 116.7 87 69.0
SalBow7G1491 Salvia bowleyana HOM05D005515 ORTHO05D006620 1.1e-24 116.7 113 55.8
Ah.02g120510 Amaranthus hybridus HOM05D005515 ORTHO05D006620 4.4e-24 114.8 75 69.3
CARHR148320 Cardamine hirsuta HOM05D005515 ORTHO05D006620 4.4e-24 114.8 113 53.1
SalBow2G3427 Salvia bowleyana HOM05D005515 ORTHO05D006620 4.4e-24 114.8 84 65.5
Sabra17G0064300 Salix brachista HOM05D005515 ORTHO05D006620 9.7e-24 113.6 106 60.4
AL5G16230 Arabidopsis lyrata HOM05D005515 ORTHO05D006620 1.7e-23 112.8 113 53.1
PGR102G1194 Punica granatum HOM05D005515 ORTHO05D006620 1.7e-23 112.8 111 55.9
ATR1098G146 Amborella trichopoda HOM05D005515 ORTHO05D006620 4.8e-23 111.3 121 52.9
Gohir.D05G311500 Gossypium hirsutum HOM05D005515 ORTHO05D006620 8.2e-23 110.5 89 66.3
Manes.12G012000 Manihot esculenta HOM05D005515 ORTHO05D006620 2.4e-22 109.0 111 55.9
THA.LOC104823981 Tarenaya hassleriana HOM05D005515 ORTHO05D006620 4.1e-22 108.2 115 53.9
Actinidia36201 Actinidia chinensis HOM05D005515 ORTHO05D006620 4.5e-21 104.8 86 65.1
MELO3C011459.2 Cucumis melo HOM05D005515 ORTHO05D006620 5.9e-21 104.4 81 65.4
Sabra16G0211700 Salix brachista HOM05D005515 ORTHO05D006620 2.2e-20 102.4 204 37.7
SMO367G0376 Selaginella moellendorffii HOM05D005515 ORTHO05D006620 2.9e-20 102.1 109 52.3
Actinidia30652 Actinidia chinensis HOM05D005515 ORTHO05D006620 6.5e-20 100.9 60 80.0
PGSC0003DMG401006926 Solanum tuberosum HOM05D005515 ORTHO05D006620 8.5e-20 100.5 86 60.5
COL.COLO4_20393 Corchorus olitorius HOM05D005515 ORTHO05D006620 2.5e-19 99.0 55 85.5
Cfa009365 Carpinus fangiana HOM05D000048 ORTHO05D000445 4.2e-19 98.2 110 50.9
MSTRG.7999 Avicennia marina HOM05D005515 ORTHO05D006620 5.5e-19 97.8 112 48.2
Oeu006531.1 Olea europaea HOM05D005515 ORTHO05D006620 1.6e-18 96.3 61 75.4
BolC7t44132H Brassica oleracea HOM05D005515 ORTHO05D006620 2.1e-18 95.9 108 51.9
C09p03480 Brassica napus HOM05D005515 ORTHO05D006620 3.6e-18 95.1 70 61.4
CSS0003202 Camellia sinensis var. sinensis HOM05D005515 ORTHO05D006620 8.0e-18 94.0 51 86.3
CSS0037049 Camellia sinensis var. sinensis HOM05D005515 ORTHO05D006620 8.0e-18 94.0 51 86.3
Carub.0005s0534 Capsella rubella HOM05D005515 ORTHO05D006620 1.0e-17 93.6 114 47.4
Nn3g16471 Nelumbo nucifera HOM05D005515 ORTHO05D006620 1.4e-17 93.2 88 56.8
A09p03280 Brassica napus HOM05D005515 ORTHO05D006620 5.2e-17 91.3 113 49.6
AT3G27100 Arabidopsis thaliana HOM05D005515 ORTHO05D006620 6.7e-17 90.9 114 46.5
Haze_12412 Corylus avellana HOM05D000048 ORTHO05D000445 1.2e-16 90.1 110 48.2
unitig_8.g2909 Utricularia gibba HOM05D005515 ORTHO05D006620 1.2e-16 90.1 107 45.8
Thhalv10005161m.g Eutrema salsugineum HOM05D005515 ORTHO05D006620 1.5e-16 89.7 113 47.8
Cpa.g.sc43.50 Carica papaya HOM05D005515 ORTHO05D006620 3.3e-16 88.6 88 56.8
Cre08.g370300 Chlamydomonas reinhardtii HOM05D005515 ORTHO05D006620 5.7e-16 87.8 86 45.3
BcaC04g23917 Brassica carinata HOM05D005515 ORTHO05D006620 1.3e-15 86.7 112 45.5
BolC9t53269H Brassica oleracea HOM05D005515 ORTHO05D006620 1.3e-15 86.7 112 45.5
Aa31LG2G5500 Aethionema arabicum HOM05D005515 ORTHO05D006620 1.7e-15 86.3 113 46.9
HanXRQChr12g0385431 Helianthus annuus HOM05D005515 ORTHO05D006620 1.7e-15 86.3 54 72.2
ClCG08G010060 Citrullus lanatus HOM05D005515 ORTHO05D006620 2.2e-15 85.9 88 54.5
Ciclev10033394m.g Citrus clementina HOM05D005515 ORTHO05D006620 2.2e-15 85.9 87 52.9
Sp2g16230 Schrenkiella parvula HOM05D005515 ORTHO05D006620 1.1e-14 83.6 112 45.5
SGA_v2.0_scaffold154G37170 Striga asiatica HOM05D005515 ORTHO05D006620 1.1e-14 83.6 94 51.1
PRCOL_00000741 Prasinoderma coloniale HOM05D005515 ORTHO05D006620 7.0e-14 80.9 87 43.7
Haze_27757 Corylus avellana HOM05D005515 ORTHO05D006620 2.7e-13 79.0 64 50.0
CDE02G3365 Ceratophyllum demersum HOM05D005515 ORTHO05D006620 5.9e-13 77.8 83 49.4
BraA06t27074Z Brassica rapa HOM05D005515 ORTHO05D006620 2.2e-12 75.9 113 43.4
BcaB04g19426 Brassica carinata HOM05D005515 ORTHO05D006620 4.2e-11 71.6 80 48.8
TWI18G0205 Tripterygium wilfordii HOM05D005515 ORTHO05D006620 7.2e-11 70.9 79 44.3
A06p41490 Brassica napus HOM05D005515 ORTHO05D006620 1.6e-10 69.7 119 42.9
C07p36160 Brassica napus HOM05D005515 ORTHO05D006620 1.4e-09 66.6 103 41.7
MCO13G114 Micromonas commoda HOM05D005515 ORTHO05D006620 5.2e-09 64.7 85 40.0
BraA09t35966Z Brassica rapa HOM05D005515 ORTHO05D006620 8.8e-09 63.9 109 40.4
BcaC06g31020 Brassica carinata HOM05D005515 ORTHO05D006620 1.3e-07 60.1 48 58.3
Nn4g22340 Nelumbo nucifera HOM05D001716 ORTHO05D004234 6.3e-07 57.8 62 50.0


User provided reference genes

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