Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0001568 Camellia sinensis var. sinensis HOM05D003763 ORTHO05D004315 1.7e-158 562.8 322 100.0
vmacro14015 Vaccinium macrocarpon HOM05D003763 ORTHO05D004315 9.0e-131 470.7 335 83.0
CSS0018103 Camellia sinensis var. sinensis HOM05D003763 ORTHO05D004315 1.6e-127 459.9 323 82.7
Dinv37708 Davidia involucrata HOM05D003763 ORTHO05D004315 2.7e-127 459.1 321 82.9
Manes.01G070000 Manihot esculenta HOM05D003763 ORTHO05D004315 4.3e-125 451.8 321 81.9
Cfa012069 Carpinus fangiana HOM05D003763 ORTHO05D004315 1.6e-124 449.9 322 81.1
Rhsim07G0096500 Rhododendron simsii HOM05D003763 ORTHO05D004315 2.1e-124 449.5 375 74.7
Lsat_1_v5_gn_6_78800 Lactuca sativa HOM05D003763 ORTHO05D004315 3.7e-124 448.7 322 79.2
Gohir.D08G195200 Gossypium hirsutum HOM05D003763 ORTHO05D004315 4.8e-124 448.4 321 81.6
Hma1.2p1_0138F.1_g062780 Hydrangea macrophylla HOM05D003763 ORTHO05D004315 4.8e-124 448.4 329 80.5
GSVIVG01019890001 Vitis vinifera HOM05D003763 ORTHO05D004315 8.2e-124 447.6 322 81.1
Duzib205G0169 Durio zibethinus HOM05D003763 ORTHO05D004315 1.1e-123 447.2 321 81.6
Cpa.g.sc29.40 Carica papaya HOM05D003763 ORTHO05D004315 1.5e-122 443.4 321 78.5
TAR629G0773 Trochodendron aralioides HOM05D003763 ORTHO05D004315 4.5e-122 441.8 322 79.5
Migut.E01271 Erythranthe guttata HOM05D003763 ORTHO05D004315 2.2e-121 439.5 321 79.1
TWI60G0957 Tripterygium wilfordii HOM05D003763 ORTHO05D004315 5.0e-121 438.3 321 79.1
TWI81G0532 Tripterygium wilfordii HOM05D003763 ORTHO05D004315 5.0e-121 438.3 321 78.5
Gorai.004G206000 Gossypium raimondii HOM05D003763 ORTHO05D004315 6.5e-121 438.0 323 80.2
Lj4g0003870 Lotus japonicus HOM05D003763 ORTHO05D004315 8.4e-121 437.6 322 80.1
Thecc.03G267900 Theobroma cacao HOM05D003763 ORTHO05D004315 8.4e-121 437.6 321 80.1
Migut.E01022 Erythranthe guttata HOM05D003763 ORTHO05D004315 1.9e-120 436.4 321 78.5
COL.COLO4_23800 Corchorus olitorius HOM05D003763 ORTHO05D004315 5.5e-120 434.9 321 79.8
Duzib084G0949 Durio zibethinus HOM05D003763 ORTHO05D004315 1.2e-119 433.7 321 79.4
Glyma.05G051300 Glycine max HOM05D003763 ORTHO05D004315 1.2e-119 433.7 324 78.7
Potri.003G119200 Populus trichocarpa HOM05D003763 ORTHO05D004315 2.7e-119 432.6 323 79.6
TAR622G0836 Trochodendron aralioides HOM05D003763 ORTHO05D004315 2.7e-119 432.6 332 77.7
CANSAT21G0452 Cannabis sativa HOM05D003763 ORTHO05D004315 3.5e-119 432.2 322 78.3
CiPaw.12G101000 Carya illinoinensis HOM05D003763 ORTHO05D004315 3.5e-119 432.2 325 79.7
Phvul.003G213900 Phaseolus vulgaris HOM05D003763 ORTHO05D004315 1.0e-118 430.6 324 79.3
Potri.001G113000 Populus trichocarpa HOM05D003763 ORTHO05D004315 1.0e-118 430.6 322 77.6
Nn1g01278 Nelumbo nucifera HOM05D003763 ORTHO05D004315 1.3e-118 430.3 323 79.6
Oeu056817.1 Olea europaea HOM05D003763 ORTHO05D004315 1.3e-118 430.3 327 76.8
DCAR_000890 Daucus carota HOM05D003763 ORTHO05D004315 3.9e-118 428.7 322 77.3
Sc22g0000420 Simmondsia chinensis HOM05D003763 ORTHO05D004315 8.7e-118 427.6 321 76.9
Nitab4.5_0010547g0050 Nicotiana tabacum HOM05D003763 ORTHO05D004315 1.1e-117 427.2 326 77.9
Peaxi162Scf00102g01354 Petunia axillaris HOM05D003763 ORTHO05D004315 1.5e-117 426.8 321 76.6
Sabra03G0083200 Salix brachista HOM05D003763 ORTHO05D004315 5.7e-117 424.9 322 78.3
Sopen08g003700 Solanum pennellii HOM05D003763 ORTHO05D004315 7.4e-117 424.5 322 78.3
THA.LOC104814132 Tarenaya hassleriana HOM05D003763 ORTHO05D004315 7.4e-117 424.5 327 76.5
Lsat_1_v5_gn_6_8180 Lactuca sativa HOM05D003763 ORTHO05D004315 9.7e-117 424.1 324 76.2
Glyma.17G133200 Glycine max HOM05D003763 ORTHO05D004315 1.6e-116 423.3 325 77.5
Oeu021144.1 Olea europaea HOM05D003763 ORTHO05D004315 1.6e-116 423.3 288 82.6
Prupe.5G086900 Prunus persica HOM05D003763 ORTHO05D004315 1.6e-116 423.3 322 78.0
THA.LOC104806356 Tarenaya hassleriana HOM05D003763 ORTHO05D004315 1.6e-116 423.3 321 77.6
HanXRQChr13g0414021 Helianthus annuus HOM05D003763 ORTHO05D004315 2.2e-116 422.9 322 76.1
SalBow6G0972 Salvia bowleyana HOM05D003763 ORTHO05D004315 2.2e-116 422.9 321 77.6
PGSC0003DMG400012494 Solanum tuberosum HOM05D003763 ORTHO05D004315 2.2e-116 422.9 323 78.9
CAN.G1394.10 Capsicum annuum HOM05D003763 ORTHO05D004315 2.8e-116 422.5 322 78.3
Sopen08g028400 Solanum pennellii HOM05D003763 ORTHO05D004315 3.7e-116 422.2 322 77.0
Ciclev10021127m.g Citrus clementina HOM05D003763 ORTHO05D004315 4.8e-116 421.8 326 77.6
arahy.Tifrunner.gnm1.ann1.QN4KPS Arachis hypogaea HOM05D003763 ORTHO05D004315 6.3e-116 421.4 328 76.8
Gorai.008G242200 Gossypium raimondii HOM05D003763 ORTHO05D004315 6.3e-116 421.4 321 77.6
Ah.12g057870 Amaranthus hybridus HOM05D003763 ORTHO05D004315 8.2e-116 421.0 324 76.9
Cc08_g13730 Coffea canephora HOM05D003763 ORTHO05D004315 1.1e-115 420.6 328 77.4
ECA240G4155 Erigeron canadensis HOM05D003763 ORTHO05D004315 1.1e-115 420.6 323 74.9
Migut.A00895 Erythranthe guttata HOM05D003763 ORTHO05D004315 1.4e-115 420.2 322 76.4
Lalb_Chr05g0214701 Lupinus albus HOM05D003763 ORTHO05D004315 1.4e-115 420.2 321 77.6
Atru.chr9.1500 Acer truncatum HOM05D003763 ORTHO05D004315 1.8e-115 419.9 321 78.5
CAN.G981.62 Capsicum annuum HOM05D003763 ORTHO05D004315 1.8e-115 419.9 322 77.3
Gohir.D12G226200 Gossypium hirsutum HOM05D003763 ORTHO05D004315 2.4e-115 419.5 321 77.3
PGSC0003DMG400022731 Solanum tuberosum HOM05D003763 ORTHO05D004315 4.1e-115 418.7 322 76.1
MSTRG.13805 Avicennia marina HOM05D003763 ORTHO05D004315 9.0e-115 417.5 323 74.3
Ca_20236_v3 Cicer arietinum L. HOM05D003763 ORTHO05D004315 1.2e-114 417.2 323 76.8
MD04G1071000 Malus domestica HOM05D003763 ORTHO05D004315 1.5e-114 416.8 324 76.5
Sp6g05550 Schrenkiella parvula HOM05D003763 ORTHO05D004315 1.5e-114 416.8 323 76.5
Aa31LG9G10510 Aethionema arabicum HOM05D003763 ORTHO05D004315 1.0e-113 414.1 323 76.8
VMungo1215G3348 Vigna mungo HOM05D003763 ORTHO05D004315 1.7e-113 413.3 354 71.8
Sp7g20960 Schrenkiella parvula HOM05D003763 ORTHO05D004315 3.8e-113 412.1 321 73.8
Aqoxy7G00504 Aquilegia oxysepala HOM05D003763 ORTHO05D004315 5.0e-113 411.8 324 76.5
FAN04G0845 Fragaria x ananassa HOM05D003763 ORTHO05D004315 6.5e-113 411.4 325 75.4
CsaV3_3G003430 Cucumis sativus L. HOM05D003763 ORTHO05D004315 1.1e-112 410.6 323 74.9
Sed0026462 Sechium edule HOM05D003763 ORTHO05D004315 1.1e-112 410.6 324 74.7
EL10Ac5g12684 Beta vulgaris HOM05D003763 ORTHO05D004315 1.9e-112 409.8 326 77.9
VMungo1215G1438 Vigna mungo HOM05D003763 ORTHO05D004315 1.9e-112 409.8 321 74.8
FvH4_5g01180 Fragaria vesca HOM05D003763 ORTHO05D004315 3.2e-112 409.1 321 75.4
Thhalv10028695m.g Eutrema salsugineum HOM05D003763 ORTHO05D004315 4.2e-112 408.7 322 76.4
FAN13G2490 Fragaria x ananassa HOM05D003763 ORTHO05D004315 4.2e-112 408.7 321 75.4
A03p29510 Brassica napus HOM05D003763 ORTHO05D004315 5.5e-112 408.3 322 75.5
BraA03t12145Z Brassica rapa HOM05D003763 ORTHO05D004315 5.5e-112 408.3 322 75.5
AT4G22890 Arabidopsis thaliana HOM05D003763 ORTHO05D004315 9.4e-112 407.5 321 73.5
Thhalv10025739m.g Eutrema salsugineum HOM05D003763 ORTHO05D004315 1.2e-111 407.1 322 74.8
A03p53850 Brassica napus HOM05D003763 ORTHO05D004315 1.6e-111 406.8 321 72.9
Eucgr.D01944 Eucalyptus grandis HOM05D003763 ORTHO05D004315 2.1e-111 406.4 330 73.9
FAN08G0919 Fragaria x ananassa HOM05D003763 ORTHO05D004315 2.1e-111 406.4 322 75.5
Medtr4g102440 Medicago truncatula HOM05D003763 ORTHO05D004315 2.1e-111 406.4 325 75.7
Nitab4.5_0002886g0120 Nicotiana tabacum HOM05D003763 ORTHO05D004315 2.1e-111 406.4 306 71.2
BcaC09g51065 Brassica carinata HOM05D003763 ORTHO05D004315 2.7e-111 406.0 322 73.9
FAN18G3786 Fragaria x ananassa HOM05D003763 ORTHO05D004315 2.7e-111 406.0 323 74.9
Phvul.002G152800 Phaseolus vulgaris HOM05D003763 ORTHO05D004315 2.7e-111 406.0 323 74.3
Hund14702 Selenicereus undatus HOM05D003763 ORTHO05D004315 2.7e-111 406.0 324 76.2
C07p52250 Brassica napus HOM05D003763 ORTHO05D004315 4.6e-111 405.2 321 72.6
BolC3t15881H Brassica oleracea HOM05D003763 ORTHO05D004315 6.1e-111 404.8 322 75.2
BolC7t45719H Brassica oleracea HOM05D003763 ORTHO05D004315 6.1e-111 404.8 321 72.6
TPR.G37646 Trifolium pratense HOM05D003763 ORTHO05D004315 6.1e-111 404.8 335 73.1
Glyma.01G214300 Glycine max HOM05D003763 ORTHO05D004315 7.9e-111 404.4 321 74.8
Aa31LG6G4960 Aethionema arabicum HOM05D003763 ORTHO05D004315 1.0e-110 404.1 324 72.8
A01p14110 Brassica napus HOM05D003763 ORTHO05D004315 1.0e-110 404.1 322 73.9
BraA01t01359Z Brassica rapa HOM05D003763 ORTHO05D004315 1.0e-110 404.1 322 73.9
C01p17370 Brassica napus HOM05D003763 ORTHO05D004315 1.4e-110 403.7 322 73.6
BolC1t01675H Brassica oleracea HOM05D003763 ORTHO05D004315 1.4e-110 403.7 322 73.6
unitig_52.g17229 Utricularia gibba HOM05D003763 ORTHO05D004315 1.8e-110 403.3 299 78.9
BcaB01g02662 Brassica carinata HOM05D003763 ORTHO05D004315 2.3e-110 402.9 321 75.1
BcaC01g04611 Brassica carinata HOM05D003763 ORTHO05D004315 2.3e-110 402.9 321 74.1
C03p35720 Brassica napus HOM05D003763 ORTHO05D004315 2.3e-110 402.9 321 74.1
MELO3C014009.2 Cucumis melo HOM05D003763 ORTHO05D004315 3.0e-110 402.5 323 74.3
Actinidia27416 Actinidia chinensis HOM05D003763 ORTHO05D004315 3.9e-110 402.1 254 91.3
arahy.Tifrunner.gnm1.ann1.HFU20B Arachis hypogaea HOM05D003763 ORTHO05D004315 8.8e-110 401.0 324 75.9
Psat4g068320 Pisum sativum HOM05D003763 ORTHO05D004315 2.0e-109 399.8 322 72.7
RcHm_v2.0_Chr7g0199911 Rosa chinensis HOM05D003763 ORTHO05D004315 2.0e-109 399.8 324 75.3
Sed0016409 Sechium edule HOM05D003763 ORTHO05D004315 2.5e-109 399.4 327 73.4
CDE04G2291 Ceratophyllum demersum HOM05D003763 ORTHO05D004315 3.3e-109 399.1 337 73.0
arahy.Tifrunner.gnm1.ann1.RZ3A35 Arachis hypogaea HOM05D003763 ORTHO05D004315 4.3e-109 398.7 325 76.0
Carub.0007s1839 Capsella rubella HOM05D003763 ORTHO05D004315 4.3e-109 398.7 321 72.0
AUR62017330 Chenopodium quinoa HOM05D003763 ORTHO05D004315 1.7e-108 396.7 324 73.5
AUR62010559 Chenopodium quinoa HOM05D003763 ORTHO05D004315 3.7e-108 395.6 324 73.5
BcaNung01019 Brassica carinata HOM05D003763 ORTHO05D004315 8.2e-108 394.4 322 72.7
CARHR254330 Cardamine hirsuta HOM05D003763 ORTHO05D004315 1.1e-107 394.0 321 73.2
Ca_24565_v3 Cicer arietinum L. HOM05D003763 ORTHO05D004315 1.1e-107 394.0 329 73.3
Medtr5g011220 Medicago truncatula HOM05D003763 ORTHO05D004315 1.8e-107 393.3 325 74.2
AT4G11960 Arabidopsis thaliana HOM05D003763 ORTHO05D004315 2.4e-107 392.9 317 73.8
Carub.0006s3106 Capsella rubella HOM05D003763 ORTHO05D004315 5.3e-107 391.7 319 73.0
PSO478G4698 Papaver somniferum HOM05D003763 ORTHO05D004315 5.3e-107 391.7 323 72.8
SalBow1G0491 Salvia bowleyana HOM05D003763 ORTHO05D004315 6.9e-107 391.3 322 72.7
AL6G46730 Arabidopsis lyrata HOM05D003763 ORTHO05D004315 9.1e-107 391.0 317 74.1
Solyc08g007770.4 Solanum lycopersicum HOM05D003763 ORTHO05D004315 1.5e-106 390.2 302 78.5
PSO782G5713 Papaver somniferum HOM05D003763 ORTHO05D004315 3.4e-106 389.0 326 72.7
Solyc08g080050.4 Solanum lycopersicum HOM05D003763 ORTHO05D004315 1.7e-105 386.7 301 76.4
BcaNung01664 Brassica carinata HOM05D003763 ORTHO05D004315 2.2e-105 386.3 274 79.2
HanXRQChr03g0084111 Helianthus annuus HOM05D003763 ORTHO05D004315 2.9e-105 386.0 308 73.4
PGR031G0886 Punica granatum HOM05D003763 ORTHO05D004315 5.0e-105 385.2 323 75.5
ClCG00G002290 Citrullus lanatus HOM05D003763 ORTHO05D004315 1.1e-104 384.0 304 75.7
CARHR229930 Cardamine hirsuta HOM05D003763 ORTHO05D004315 1.9e-104 383.3 321 71.3
Nitab4.5_0001200g0070 Nicotiana tabacum HOM05D003763 ORTHO05D004315 5.5e-104 381.7 255 77.3
BraA03t14454Z Brassica rapa HOM05D003763 ORTHO05D004315 1.2e-103 380.6 302 73.5
Lj8C243T4 Lonicera japonica HOM05D003763 ORTHO05D004315 3.6e-103 379.0 256 87.1
Haze_08989 Corylus avellana HOM05D003763 ORTHO05D004315 1.5e-101 373.6 304 75.7
ATR0661G459 Amborella trichopoda HOM05D003763 ORTHO05D004315 2.2e-100 369.8 262 80.5
Lj2g0000892 Lotus japonicus HOM05D003763 ORTHO05D004315 2.8e-100 369.4 323 72.1
Lj2A202G55 Lonicera japonica HOM05D003763 ORTHO05D004315 8.2e-100 367.9 268 78.7
Actinidia14012 Actinidia chinensis HOM05D003763 ORTHO05D004315 1.1e-96 357.5 227 92.5
Zm00001eb064990 Zea mays HOM05D003763 ORTHO05D004315 8.0e-95 351.3 261 77.0
Gohir.A08G176900 Gossypium hirsutum HOM05D003763 ORTHO05D004315 8.8e-94 347.8 226 89.4
Os03g0857400 Oryza sativa ssp. japonica HOM05D003763 ORTHO05D004315 1.1e-93 347.4 261 77.8
Nitab4.5_0003274g0090 Nicotiana tabacum HOM05D003763 ORTHO05D004315 2.0e-93 346.7 322 59.9
arahy.Tifrunner.gnm1.ann1.N69HTX Arachis hypogaea HOM05D003763 ORTHO05D004315 1.3e-92 344.0 328 67.4
AL7G30630 Arabidopsis lyrata HOM05D003763 ORTHO05D004315 5.9e-90 335.1 226 84.5
Mapoly0048s0082 Marchantia polymorpha HOM05D003763 ORTHO05D004315 2.7e-87 326.2 325 62.8
Peaxi162Scf00620g00056 Petunia axillaris HOM05D003763 ORTHO05D004315 1.5e-85 320.5 355 60.6
ClCG00G000150 Citrullus lanatus HOM05D003763 ORTHO05D004315 4.4e-85 318.9 323 63.8
ClCG10G003400 Citrullus lanatus HOM05D003763 ORTHO05D004315 4.4e-85 318.9 323 63.8
SEGI_18243 Sequoiadendron giganteum HOM05D003763 ORTHO05D004315 6.3e-84 315.1 267 67.0
Pp3c10_15390 Physcomitrium patens HOM05D003763 ORTHO05D004315 1.2e-82 310.8 278 64.0
Dinv39038 Davidia involucrata HOM05D003763 ORTHO05D004315 5.5e-80 302.0 246 80.1
SMO356G0021 Selaginella moellendorffii HOM05D003763 ORTHO05D004315 3.6e-79 299.3 250 60.8
Actinidia05236 Actinidia chinensis HOM05D003763 ORTHO05D004315 1.8e-78 297.0 258 64.0
unitig_699.g19760 Utricularia gibba HOM05D003763 ORTHO05D004315 2.3e-78 296.6 203 86.2
CiPaw.11G143200 Carya illinoinensis HOM05D003763 ORTHO05D004315 6.8e-78 295.0 235 80.0
AagrBONN_evm.TU.Sc2ySwM_362.2619 Anthoceros agrestis HOM05D003763 ORTHO05D004315 2.0e-77 293.5 251 61.0
Psat2g180880 Pisum sativum HOM05D003763 ORTHO05D004315 3.7e-76 289.3 262 72.1
Psat6g136800 Pisum sativum HOM05D003763 ORTHO05D004315 2.9e-73 279.6 218 77.1
CBR_g23735 Chara braunii HOM05D003763 ORTHO05D004315 7.8e-58 228.4 270 46.7
Cre07.g340200 Chlamydomonas reinhardtii HOM05D003763 ORTHO05D004315 8.6e-57 224.9 273 49.8
Zm00001eb065010 Zea mays HOM05D003763 ORTHO05D004315 2.3e-54 216.9 144 75.7
MSTRG.12034 Avicennia marina HOM05D003763 ORTHO05D004315 5.4e-51 205.7 192 72.4
CDE07G1293 Ceratophyllum demersum HOM05D003763 ORTHO05D004315 6.0e-50 202.2 120 82.5
Gohir.A12G223632 Gossypium hirsutum HOM05D003763 ORTHO05D004315 5.6e-48 195.7 120 80.0
Glyma.12G170600 Glycine max HOM05D003763 ORTHO05D004315 3.6e-47 193.0 144 70.8
CDE07G1747 Ceratophyllum demersum HOM05D003763 ORTHO05D004315 1.2e-45 188.0 212 65.1
Gohir.A12G223566 Gossypium hirsutum HOM05D003763 ORTHO05D004315 2.4e-43 180.3 144 68.1
Actinidia02868 Actinidia chinensis HOM05D003763 ORTHO05D004315 2.7e-34 150.2 257 41.2
HPP92_014954 Vanilla planifolia HOM05D003763 ORTHO05D004315 4.6e-34 149.4 142 60.6
Zm00001eb305640 Zea mays HOM05D003763 ORTHO05D004315 4.3e-32 142.9 88 78.4
Lsat_1_v5_gn_8_1701 Lactuca sativa HOM05D003763 ORTHO05D004315 5.6e-32 142.5 96 72.9
TPR.G14577 Trifolium pratense HOM05D003763 ORTHO05D004315 3.1e-30 136.7 108 75.0
Zm00001eb065020 Zea mays HOM05D003763 ORTHO05D004315 8.7e-25 118.6 76 78.9
BcaC02g09855 Brassica carinata HOM05D003763 ORTHO05D004315 2.0e-21 107.5 177 51.4
Pp3c3_19870 Physcomitrium patens HOM05D003763 ORTHO05D004315 4.6e-18 96.3 107 67.3
C04p35880 Brassica napus HOM05D003763 ORTHO05D004315 1.0e-17 95.1 178 50.0
Os08g0526300 Oryza sativa ssp. japonica HOM05D003763 ORTHO05D004315 3.3e-16 90.1 83 80.7
TPR.G23383 Trifolium pratense HOM05D003424 ORTHO05D004025 1.6e-15 87.8 131 46.6
arahy.Tifrunner.gnm1.ann1.AG3Z3P Arachis hypogaea HOM05D003763 ORTHO05D004315 9.6e-08 62.0 88 42.0
MCO02G269 Micromonas commoda HOM05D066820 ORTHO05D004315 2.8e-07 60.5 83 37.3


User provided reference genes

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