Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0000775 Camellia sinensis var. sinensis HOM05D001734 ORTHO05D033929 7.7e-106 387.1 190 100.0
CSS0041674 Camellia sinensis var. sinensis HOM05D001734 ORTHO05D033929 5.6e-88 327.8 196 86.7
Actinidia19322 Actinidia chinensis HOM05D001734 ORTHO05D003483 1.1e-54 217.2 138 76.8
Dinv20652 Davidia involucrata HOM05D001734 ORTHO05D003483 1.7e-49 199.9 138 71.0
Haze_07473 Corylus avellana HOM05D001734 ORTHO05D003483 2.1e-47 193.0 139 66.2
QL10p011601 Quercus lobata HOM05D001734 ORTHO05D003483 2.0e-45 186.4 138 64.5
RcHm_v2.0_Chr6g0271131 Rosa chinensis HOM05D001734 ORTHO05D003483 2.6e-45 186.0 138 61.6
MD06G1173700 Malus domestica HOM05D001734 ORTHO05D003483 4.5e-45 185.3 138 60.9
CiPaw.11G026100 Carya illinoinensis HOM05D001734 ORTHO05D003483 9.9e-45 184.1 157 57.3
Duzib084G0583 Durio zibethinus HOM05D001734 ORTHO05D003483 6.4e-44 181.4 138 62.3
TAR629G1256 Trochodendron aralioides HOM05D001734 ORTHO05D003483 1.9e-43 179.9 139 64.0
COL.COLO4_30039 Corchorus olitorius HOM05D001734 ORTHO05D003483 4.2e-43 178.7 138 62.3
Prupe.5G173600 Prunus persica HOM05D001734 ORTHO05D003483 7.1e-43 177.9 138 59.4
Potri.015G076650 Populus trichocarpa HOM05D001734 ORTHO05D003483 1.2e-42 177.2 157 54.1
Sabra15G0101700 Salix brachista HOM05D001734 ORTHO05D003483 2.1e-42 176.4 138 58.7
Thecc.03G012800 Theobroma cacao HOM05D001734 ORTHO05D003483 2.7e-42 176.0 138 60.9
Cfa019134 Carpinus fangiana HOM05D001734 ORTHO05D003483 1.0e-41 174.1 112 73.2
vmacro19388 Vaccinium macrocarpon HOM05D001734 ORTHO05D003483 6.7e-41 171.4 104 77.9
FvH4_2g11670 Fragaria vesca HOM05D001734 ORTHO05D003483 3.3e-40 169.1 140 57.1
Cpa.g.sc76.53 Carica papaya HOM05D001734 ORTHO05D003483 4.3e-40 168.7 138 59.4
PSO063G0326 Papaver somniferum HOM05D001734 ORTHO05D003483 4.3e-40 168.7 139 57.6
FAN15G3378 Fragaria x ananassa HOM05D001734 ORTHO05D003483 2.1e-39 166.4 140 56.4
PSO063G7150 Papaver somniferum HOM05D001734 ORTHO05D003483 3.7e-39 165.6 139 56.8
Atru.chr9.2479 Acer truncatum HOM05D001734 ORTHO05D003483 4.8e-39 165.2 138 60.1
FAN05G4580 Fragaria x ananassa HOM05D001734 ORTHO05D003483 8.1e-39 164.5 140 55.7
TWI14G0283 Tripterygium wilfordii HOM05D001734 ORTHO05D003483 1.1e-38 164.1 161 49.1
Manes.06G105000 Manihot esculenta HOM05D001734 ORTHO05D003483 1.8e-38 163.3 138 55.8
Lsat_1_v5_gn_1_27061 Lactuca sativa HOM05D001734 ORTHO05D003483 2.4e-38 162.9 139 55.4
HanXRQChr02g0036361 Helianthus annuus HOM05D001734 ORTHO05D003483 4.0e-38 162.2 138 56.5
Psat5g114800 Pisum sativum HOM05D001734 ORTHO05D003483 4.0e-38 162.2 157 52.9
Sc04g0001800 Simmondsia chinensis HOM05D001734 ORTHO05D003483 5.3e-38 161.8 138 55.8
CANSAT80G1574 Cannabis sativa HOM05D001734 ORTHO05D003483 1.5e-37 160.2 141 56.0
Gohir.A09G171700 Gossypium hirsutum HOM05D001734 ORTHO05D003483 1.5e-37 160.2 138 57.2
Hund02744 Selenicereus undatus HOM05D001734 ORTHO05D003483 5.8e-37 158.3 138 54.3
Gorai.006G189100 Gossypium raimondii HOM05D001734 ORTHO05D003483 7.6e-37 157.9 138 56.5
Gohir.D09G167401 Gossypium hirsutum HOM05D001734 ORTHO05D003483 1.3e-36 157.1 138 56.5
Medtr3g077860 Medicago truncatula HOM05D001734 ORTHO05D003483 3.2e-35 152.5 157 51.0
Aqoxy3G02937 Aquilegia oxysepala HOM05D001734 ORTHO05D003483 1.2e-34 150.6 139 54.0
Lalb_Chr08g0236501 Lupinus albus HOM05D001734 ORTHO05D003483 1.2e-34 150.6 140 54.3
DCAR_026136 Daucus carota HOM05D001734 ORTHO05D003483 2.1e-34 149.8 138 56.5
Ca_16176_v3 Cicer arietinum L. HOM05D001734 ORTHO05D003483 4.6e-34 148.7 157 49.7
MELO3C017087.2 Cucumis melo HOM05D001734 ORTHO05D003483 4.6e-34 148.7 140 52.1
Ciclev10018427m.g Citrus clementina HOM05D001734 ORTHO05D003483 6.0e-34 148.3 145 53.1
Eucgr.K02842 Eucalyptus grandis HOM05D001734 ORTHO05D003483 6.0e-34 148.3 138 52.2
Lj1g0011912 Lotus japonicus HOM05D001734 ORTHO05D003483 6.0e-34 148.3 157 47.1
PGR044G0033 Punica granatum HOM05D001734 ORTHO05D003483 7.9e-34 147.9 138 52.2
GSVIVG01007755001 Vitis vinifera HOM05D001734 ORTHO05D003483 1.3e-33 147.1 93 76.3
ECA247G1446 Erigeron canadensis HOM05D001734 ORTHO05D003483 2.3e-33 146.4 138 52.2
Nn4g22757 Nelumbo nucifera HOM05D001734 ORTHO05D003483 2.3e-33 146.4 139 49.6
Sed0023277 Sechium edule HOM05D001734 ORTHO05D003483 6.7e-33 144.8 141 52.5
ClCG06G017040 Citrullus lanatus HOM05D001734 ORTHO05D003483 1.1e-32 144.1 139 51.1
Oeu016387.4 Olea europaea HOM05D001734 ORTHO05D003483 1.9e-32 143.3 143 53.8
Glyma.04G182900 Glycine max HOM05D001734 ORTHO05D003483 2.5e-32 142.9 140 52.1
CsaV3_1G001470 Cucumis sativus L. HOM05D001734 ORTHO05D003483 3.3e-32 142.5 141 51.1
A06p27460 Brassica napus HOM05D001734 ORTHO05D003483 5.7e-32 141.7 138 50.0
C03p66700 Brassica napus HOM05D001734 ORTHO05D003483 5.7e-32 141.7 138 50.0
BraA06t25686Z Brassica rapa HOM05D001734 ORTHO05D003483 5.7e-32 141.7 138 50.0
BolC3t18938H Brassica oleracea HOM05D001734 ORTHO05D003483 1.6e-31 140.2 138 50.0
Phvul.009G178400 Phaseolus vulgaris HOM05D001734 ORTHO05D003483 1.6e-31 140.2 140 52.9
THA.LOC104818218 Tarenaya hassleriana HOM05D001734 ORTHO05D003483 1.6e-31 140.2 138 50.7
EL10Ac5g10743 Beta vulgaris HOM05D001734 ORTHO05D003483 1.1e-30 137.5 138 52.2
Thhalv10010050m.g Eutrema salsugineum HOM05D001734 ORTHO05D003483 1.1e-30 137.5 138 49.3
Nitab4.5_0000984g0090 Nicotiana tabacum HOM05D001734 ORTHO05D003483 1.8e-30 136.7 138 51.4
SalBow5G1563 Salvia bowleyana HOM05D001734 ORTHO05D003483 1.8e-30 136.7 138 53.6
AUR62008208 Chenopodium quinoa HOM05D001734 ORTHO05D003483 2.4e-30 136.3 138 51.4
AUR62030960 Chenopodium quinoa HOM05D001734 ORTHO05D003483 4.1e-30 135.6 139 50.4
Aa31LG4G16790 Aethionema arabicum HOM05D001734 ORTHO05D003483 6.9e-30 134.8 138 48.6
Migut.I00009 Erythranthe guttata HOM05D001734 ORTHO05D003483 9.0e-30 134.4 159 45.9
Sp5g13840 Schrenkiella parvula HOM05D001734 ORTHO05D003483 9.0e-30 134.4 138 49.3
arahy.Tifrunner.gnm1.ann1.0L1HI6 Arachis hypogaea HOM05D001734 ORTHO05D003483 2.0e-29 133.3 157 43.3
Solyc03g112950.4 Solanum lycopersicum HOM05D001734 ORTHO05D003483 3.4e-29 132.5 138 50.0
AT3G48190 Arabidopsis thaliana HOM05D001734 ORTHO05D003483 5.9e-29 131.7 138 47.1
Sopen03g032020 Solanum pennellii HOM05D001734 ORTHO05D003483 5.9e-29 131.7 138 50.0
CARHR156920 Cardamine hirsuta HOM05D001734 ORTHO05D003483 7.6e-29 131.3 139 47.5
SGA_v2.0_scaffold90G27914 Striga asiatica HOM05D001734 ORTHO05D003483 7.6e-29 131.3 140 50.7
VMungo1309G1151 Vigna mungo HOM05D001734 ORTHO05D003483 7.6e-29 131.3 141 47.5
Peaxi162Scf00009g00114 Petunia axillaris HOM05D001734 ORTHO05D003483 1.0e-28 131.0 138 50.0
AL5G27530 Arabidopsis lyrata HOM05D001734 ORTHO05D003483 2.2e-28 129.8 138 47.1
HPP92_004868 Vanilla planifolia HOM05D001734 ORTHO05D003483 2.9e-28 129.4 138 43.5
arahy.Tifrunner.gnm1.ann1.2D0TBT Arachis hypogaea HOM05D001734 ORTHO05D003483 3.8e-28 129.0 181 39.2
MSTRG.11455 Avicennia marina HOM05D001734 ORTHO05D003483 4.2e-27 125.6 138 50.0
Carub.0005s1431 Capsella rubella HOM05D001734 ORTHO05D003483 9.3e-27 124.4 138 44.9
ATR0730G231 Amborella trichopoda HOM05D001734 ORTHO05D003483 2.7e-26 122.9 158 38.6
CAN.G1305.19 Capsicum annuum HOM05D001734 ORTHO05D003483 6.1e-26 121.7 138 47.8
CDE07G1059 Ceratophyllum demersum HOM05D001734 ORTHO05D003483 4.3e-24 115.5 143 40.6
SEGI_29837 Sequoiadendron giganteum HOM05D001734 ORTHO05D003483 2.2e-23 113.2 140 37.9
FAN20G1174 Fragaria x ananassa HOM05D001734 ORTHO05D003483 1.3e-20 104.0 74 63.5
Os01g0106700 Oryza sativa ssp. japonica HOM05D001734 ORTHO05D003483 4.2e-19 99.0 140 37.9
unitig_0.g1441 Utricularia gibba HOM05D001734 ORTHO05D003483 7.2e-19 98.2 119 42.0
FAN20G1266 Fragaria x ananassa HOM05D001734 ORTHO05D003483 2.1e-18 96.7 74 62.2
Zm00001eb126710 Zea mays HOM05D001734 ORTHO05D003483 4.6e-18 95.5 140 37.1
Nitab4.5_0000785g0010 Nicotiana tabacum HOM05D001734 ORTHO05D003483 3.0e-17 92.8 138 40.6
SHI17000 Sapria himalayana HOM05D001734 ORTHO05D033929 3.9e-17 92.4 195 31.8
Mapoly0081s0051 Marchantia polymorpha HOM05D001734 ORTHO05D003483 5.3e-14 82.0 140 31.4
Pp3c2_23700 Physcomitrium patens HOM05D001734 ORTHO05D003483 1.1e-11 74.3 110 33.6
FAN24G1896 Fragaria x ananassa HOM05D001734 ORTHO05D003483 9.4e-11 71.2 66 51.5
SEGI_10166 Sequoiadendron giganteum HOM05D058745 ORTHO05D003483 4.4e-08 62.4 75 34.7
SEGI_25210 Sequoiadendron giganteum HOM05D058745 ORTHO05D003483 4.4e-08 62.4 75 34.7
Lj9A448G34 Lonicera japonica HOM05D001734 ORTHO05D003483 3.7e-07 59.3 41 65.9
TPR.G6034 Trifolium pratense HOM05D001734 ORTHO05D003483 3.7e-07 59.3 60 46.7


User provided reference genes

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