Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_27510 Corchorus olitorius HOM05D005906 ORTHO05D007359 6.5e-154 547.4 275 100.0
Thecc.02G295800 Theobroma cacao HOM05D005906 ORTHO05D007359 3.6e-120 435.3 270 82.6
Duzib251G0270 Durio zibethinus HOM05D005906 ORTHO05D007359 1.0e-119 433.7 270 81.9
Gohir.D01G138300 Gossypium hirsutum HOM05D005906 ORTHO05D007359 1.8e-111 406.4 270 77.4
Gorai.002G167700 Gossypium raimondii HOM05D005906 ORTHO05D007359 2.0e-107 392.9 270 75.6
Gohir.A01G145818 Gossypium hirsutum HOM05D005906 ORTHO05D007359 1.7e-106 389.8 270 74.8
GSVIVG01010209001 Vitis vinifera HOM05D005906 ORTHO05D007359 5.4e-76 288.5 279 57.3
Atru.chr11.1229 Acer truncatum HOM05D005906 ORTHO05D007359 2.3e-74 283.1 272 57.7
Dinv12052 Davidia involucrata HOM05D005906 ORTHO05D007359 3.3e-73 279.3 277 58.5
Atru.chr11.1316 Acer truncatum HOM05D005906 ORTHO05D007359 2.1e-72 276.6 272 57.0
Haze_11727 Corylus avellana HOM05D005906 ORTHO05D007359 3.4e-70 269.2 277 57.8
Cfa008717 Carpinus fangiana HOM05D005906 ORTHO05D007359 4.2e-68 262.3 277 56.3
TAR371G1124 Trochodendron aralioides HOM05D005906 ORTHO05D007359 7.8e-67 258.1 284 53.9
Prupe.1G345100 Prunus persica HOM05D005906 ORTHO05D007359 6.6e-66 255.0 279 52.7
Potri.010G170400 Populus trichocarpa HOM05D005906 ORTHO05D007359 1.4e-63 247.3 270 54.1
Nn3g18680 Nelumbo nucifera HOM05D005906 ORTHO05D007359 2.4e-63 246.5 274 52.6
TWI53G0095 Tripterygium wilfordii HOM05D005906 ORTHO05D007359 2.4e-63 246.5 277 53.4
Ciclev10030612m.g Citrus clementina HOM05D005906 ORTHO05D007359 7.6e-62 241.5 273 51.6
Sabra10G0130100 Salix brachista HOM05D005906 ORTHO05D007359 7.6e-62 241.5 271 53.1
CSS0007611 Camellia sinensis var. sinensis HOM05D005906 ORTHO05D007359 9.9e-62 241.1 277 51.6
RcHm_v2.0_Chr4g0446421 Rosa chinensis HOM05D005906 ORTHO05D007359 1.3e-61 240.7 274 52.2
Ca_03032_v3 Cicer arietinum L. HOM05D005906 ORTHO05D007359 3.2e-60 236.1 275 51.6
Actinidia04315 Actinidia chinensis HOM05D005906 ORTHO05D007359 5.4e-60 235.3 255 53.3
CiPaw.05G166700 Carya illinoinensis HOM05D005906 ORTHO05D007359 2.3e-58 229.9 266 50.4
QL03p043467 Quercus lobata HOM05D005906 ORTHO05D007359 4.3e-57 225.7 265 49.8
Lalb_Chr01g0001511 Lupinus albus HOM05D005906 ORTHO05D007359 1.3e-56 224.2 277 48.4
TWI74G1493 Tripterygium wilfordii HOM05D005906 ORTHO05D007359 1.4e-55 220.7 272 49.3
Rhsim09G0071900 Rhododendron simsii HOM05D005906 ORTHO05D007359 3.1e-55 219.5 273 49.1
Lj3g0019719 Lotus japonicus HOM05D005906 ORTHO05D007359 5.3e-55 218.8 275 49.8
Eucgr.G02565 Eucalyptus grandis HOM05D005906 ORTHO05D007359 2.0e-54 216.9 272 47.1
MD16G1000200 Malus domestica HOM05D005906 ORTHO05D007359 7.6e-54 214.9 280 49.6
PGR142G1078 Punica granatum HOM05D005906 ORTHO05D007359 2.2e-53 213.4 274 45.6
Aqoxy3G04280 Aquilegia oxysepala HOM05D005906 ORTHO05D007359 3.8e-53 212.6 271 46.9
Sopen04g003870 Solanum pennellii HOM05D005906 ORTHO05D007359 1.9e-52 210.3 282 45.7
Solyc04g008700.3 Solanum lycopersicum HOM05D005906 ORTHO05D007359 4.2e-52 209.1 282 45.4
Sc10g0007040 Simmondsia chinensis HOM05D005906 ORTHO05D007359 5.5e-52 208.8 283 47.0
vmacro16015 Vaccinium macrocarpon HOM05D005906 ORTHO05D007359 5.5e-52 208.8 279 47.7
VMungo1127G1981 Vigna mungo HOM05D005906 ORTHO05D007359 7.1e-52 208.4 280 48.6
AUR62015199 Chenopodium quinoa HOM05D005906 ORTHO05D007359 2.1e-51 206.8 262 48.5
arahy.Tifrunner.gnm1.ann1.KE9NE3 Arachis hypogaea HOM05D005906 ORTHO05D007359 3.5e-51 206.1 281 47.3
arahy.Tifrunner.gnm1.ann1.LWY0NT Arachis hypogaea HOM05D005906 ORTHO05D007359 1.8e-50 203.8 278 46.8
AUR62017662 Chenopodium quinoa HOM05D005906 ORTHO05D007359 3.9e-50 202.6 262 47.7
Glyma.11G102600 Glycine max HOM05D005906 ORTHO05D007359 3.9e-50 202.6 280 45.4
Glyma.11G103100 Glycine max HOM05D005906 ORTHO05D007359 3.9e-50 202.6 280 45.4
PSO063G6838 Papaver somniferum HOM05D005906 ORTHO05D007359 6.7e-50 201.8 260 47.3
Psat7g176600 Pisum sativum HOM05D005906 ORTHO05D007359 6.7e-50 201.8 275 45.8
Sed0021796 Sechium edule HOM05D005906 ORTHO05D007359 1.3e-48 197.6 280 43.2
DCAR_006599 Daucus carota HOM05D005906 ORTHO05D007359 3.7e-48 196.1 275 47.3
CAN.G419.29 Capsicum annuum HOM05D005906 ORTHO05D007359 6.2e-48 195.3 262 45.4
Thhalv10020134m.g Eutrema salsugineum HOM05D005906 ORTHO05D007359 1.4e-47 194.1 244 48.0
MBI03_g33918_MAGBIO Magnolia biondii HOM05D005906 ORTHO05D007359 1.4e-47 194.1 290 45.5
PSO782G0435 Papaver somniferum HOM05D005906 ORTHO05D007359 1.4e-47 194.1 260 45.8
EL10Ac9g22918 Beta vulgaris HOM05D005906 ORTHO05D007359 1.8e-47 193.7 199 52.3
AL3G33350 Arabidopsis lyrata HOM05D005906 ORTHO05D007359 2.4e-47 193.4 244 47.1
Glyma.12G028100 Glycine max HOM05D005906 ORTHO05D007359 3.1e-47 193.0 272 44.9
Carub.0003s1972 Capsella rubella HOM05D005906 ORTHO05D007359 5.3e-47 192.2 226 48.7
ATR0618G038 Amborella trichopoda HOM05D005906 ORTHO05D007359 6.9e-47 191.8 291 44.7
Oeu022359.1 Olea europaea HOM05D005906 ORTHO05D007359 6.9e-47 191.8 274 43.8
Medtr4g074440 Medicago truncatula HOM05D005906 ORTHO05D007359 9.0e-47 191.4 191 52.9
Sp3g17850 Schrenkiella parvula HOM05D005906 ORTHO05D007359 1.2e-46 191.0 275 46.5
Phvul.011G031500 Phaseolus vulgaris HOM05D005906 ORTHO05D007359 1.5e-46 190.7 277 45.1
CsaV3_7G033650 Cucumis sativus L. HOM05D005906 ORTHO05D007359 2.0e-46 190.3 277 41.5
Nitab4.5_0001983g0010 Nicotiana tabacum HOM05D005906 ORTHO05D007359 5.8e-46 188.7 272 44.9
AT3G19840 Arabidopsis thaliana HOM05D005906 ORTHO05D007359 7.6e-46 188.3 272 43.4
MELO3C024279.2 Cucumis melo HOM05D005906 ORTHO05D007359 1.3e-45 187.6 277 41.2
FvH4_4g36700 Fragaria vesca HOM05D005906 ORTHO05D007359 1.3e-45 187.6 270 42.6
FAN12G0559 Fragaria x ananassa HOM05D005906 ORTHO05D007359 4.9e-45 185.7 270 42.2
MD13G1007900 Malus domestica HOM05D005906 ORTHO05D007359 4.9e-45 185.7 241 48.1
Peaxi162Scf00329g00515 Petunia axillaris HOM05D005906 ORTHO05D007359 1.2e-43 181.0 256 43.8
ClCG09G001670 Citrullus lanatus HOM05D005906 ORTHO05D007359 1.6e-43 180.6 277 41.2
FAN17G1621 Fragaria x ananassa HOM05D005906 ORTHO05D007359 2.7e-43 179.9 270 40.7
Nitab4.5_0000129g0230 Nicotiana tabacum HOM05D005906 ORTHO05D007359 3.5e-43 179.5 261 43.7
A05p29280 Brassica napus HOM05D005906 ORTHO05D007359 1.8e-42 177.2 271 43.5
HanXRQChr17g0540691 Helianthus annuus HOM05D005906 ORTHO05D007359 2.3e-42 176.8 250 42.4
BraA05t21811Z Brassica rapa HOM05D005906 ORTHO05D007359 3.9e-42 176.0 271 43.2
FAN07G0309 Fragaria x ananassa HOM05D005906 ORTHO05D007359 8.7e-42 174.9 270 41.1
Lju1295A4T31 Lonicera japonica HOM05D005906 ORTHO05D007359 3.3e-41 172.9 295 40.7
BcaC05g28400 Brassica carinata HOM05D005906 ORTHO05D007359 9.6e-41 171.4 273 41.4
BolC5t33205H Brassica oleracea HOM05D005906 ORTHO05D007359 9.6e-41 171.4 273 41.4
BcaB06g26053 Brassica carinata HOM05D005906 ORTHO05D007359 3.7e-40 169.5 239 44.8
C05p44790 Brassica napus HOM05D005906 ORTHO05D007359 1.1e-39 167.9 273 41.0
Migut.N00351 Erythranthe guttata HOM05D005906 ORTHO05D007359 6.9e-39 165.2 262 41.2
SEGI_27443 Sequoiadendron giganteum HOM05D005906 ORTHO05D007359 1.5e-38 164.1 268 41.0
Os10g0485000 Oryza sativa ssp. japonica HOM05D005906 ORTHO05D007359 4.2e-36 156.0 275 41.5
ECA246G1682 Erigeron canadensis HOM05D005906 ORTHO05D007359 1.2e-35 154.5 268 37.3
Lsat_1_v5_gn_0_9300 Lactuca sativa HOM05D005906 ORTHO05D007359 3.0e-34 149.8 279 40.1
SGA_v2.0_scaffold317G48430 Striga asiatica HOM05D005906 ORTHO05D007359 1.5e-33 147.5 271 42.4
Manes.03G080900 Manihot esculenta HOM05D005906 ORTHO05D007359 3.7e-32 142.9 89 71.9
CARHR095360 Cardamine hirsuta HOM05D005906 ORTHO05D007359 6.9e-31 138.7 79 75.9
CDE04G3187 Ceratophyllum demersum HOM05D005906 ORTHO05D007359 9.0e-31 138.3 286 38.1
TPR.G21563 Trifolium pratense HOM05D005906 ORTHO05D007359 1.5e-30 137.5 280 37.1
CDE08G0300 Ceratophyllum demersum HOM05D005906 ORTHO05D007359 5.9e-30 135.6 284 35.9
arahy.Tifrunner.gnm1.ann1.HBZ9IW Arachis hypogaea HOM05D005906 ORTHO05D007359 1.2e-27 127.9 95 63.2
CANSAT64G0121 Cannabis sativa HOM05D005906 ORTHO05D007359 8.8e-26 121.7 236 39.4
HPP92_015160 Vanilla planifolia HOM05D005906 ORTHO05D007359 2.0e-25 120.6 78 66.7
Pp3c7_20890 Physcomitrium patens HOM05D005906 ORTHO05D007359 2.5e-25 120.2 289 39.4
CBR_g3777 Chara braunii HOM05D005906 ORTHO05D007359 4.3e-25 119.4 71 71.8
Pp3c11_2890 Physcomitrium patens HOM05D005906 ORTHO05D007359 7.4e-25 118.6 316 34.2
Aa31LG8G6610 Aethionema arabicum HOM05D005906 ORTHO05D007359 3.7e-24 116.3 232 39.7
Mapoly0048s0088 Marchantia polymorpha HOM05D005906 ORTHO05D007359 9.1e-23 111.7 294 36.1
SMO347G0007 Selaginella moellendorffii HOM05D005906 ORTHO05D007359 7.7e-22 108.6 282 35.1
Cpa.g.c31481.2 Carica papaya HOM05D005906 ORTHO05D007359 2.1e-19 100.5 152 44.1
unitig_26.g9977 Utricularia gibba HOM05D005906 ORTHO05D007359 2.7e-19 100.1 294 31.0
Cre09.g393551 Chlamydomonas reinhardtii HOM05D005906 ORTHO05D007359 4.1e-15 86.3 67 53.7
HanXRQChr13g0425271 Helianthus annuus HOM05D005906 ORTHO05D007359 8.8e-10 68.6 40 72.5


User provided reference genes

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